Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_E10
         (593 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   352   2e-97
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   352   2e-97
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   352   2e-97
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   352   2e-97
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   352   2e-97
AE014134-928|AAN10543.1|  612|Drosophila melanogaster CG31915-PA...    31   1.2  
AE014296-1325|AAF50514.2| 1066|Drosophila melanogaster CG32369-P...    30   2.7  

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  352 bits (866), Expect = 2e-97
 Identities = 159/194 (81%), Positives = 171/194 (88%)
 Frame = +1

Query: 10  NGGTIEDKVKWAREHLEKPIPIDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTH 189
           NGG+IEDKVKWAREHLEKPI + +VF QDEMIDC+            SRWHTKKLPRKTH
Sbjct: 197 NGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTH 256

Query: 190 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNAST 369
           KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIHTKDGKVIKNNAST
Sbjct: 257 KGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNAST 316

Query: 370 EYDFSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKIDL 549
           EYD ++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKR+ITLRKSL  HTKR+ALE+I L
Sbjct: 317 EYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKL 376

Query: 550 KFIDTASKFGHGRF 591
           KFIDT+SK GHGRF
Sbjct: 377 KFIDTSSKMGHGRF 390


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  352 bits (866), Expect = 2e-97
 Identities = 159/194 (81%), Positives = 171/194 (88%)
 Frame = +1

Query: 10  NGGTIEDKVKWAREHLEKPIPIDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTH 189
           NGG+IEDKVKWAREHLEKPI + +VF QDEMIDC+            SRWHTKKLPRKTH
Sbjct: 186 NGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTH 245

Query: 190 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNAST 369
           KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIHTKDGKVIKNNAST
Sbjct: 246 KGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNAST 305

Query: 370 EYDFSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKIDL 549
           EYD ++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKR+ITLRKSL  HTKR+ALE+I L
Sbjct: 306 EYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKL 365

Query: 550 KFIDTASKFGHGRF 591
           KFIDT+SK GHGRF
Sbjct: 366 KFIDTSSKMGHGRF 379


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  352 bits (866), Expect = 2e-97
 Identities = 159/194 (81%), Positives = 171/194 (88%)
 Frame = +1

Query: 10  NGGTIEDKVKWAREHLEKPIPIDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTH 189
           NGG+IEDKVKWAREHLEKPI + +VF QDEMIDC+            SRWHTKKLPRKTH
Sbjct: 173 NGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTH 232

Query: 190 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNAST 369
           KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIHTKDGKVIKNNAST
Sbjct: 233 KGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNAST 292

Query: 370 EYDFSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKIDL 549
           EYD ++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKR+ITLRKSL  HTKR+ALE+I L
Sbjct: 293 EYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKL 352

Query: 550 KFIDTASKFGHGRF 591
           KFIDT+SK GHGRF
Sbjct: 353 KFIDTSSKMGHGRF 366


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  352 bits (866), Expect = 2e-97
 Identities = 159/194 (81%), Positives = 171/194 (88%)
 Frame = +1

Query: 10  NGGTIEDKVKWAREHLEKPIPIDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTH 189
           NGG+IEDKVKWAREHLEKPI + +VF QDEMIDC+            SRWHTKKLPRKTH
Sbjct: 173 NGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTH 232

Query: 190 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNAST 369
           KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIHTKDGKVIKNNAST
Sbjct: 233 KGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNAST 292

Query: 370 EYDFSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKIDL 549
           EYD ++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKR+ITLRKSL  HTKR+ALE+I L
Sbjct: 293 EYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKL 352

Query: 550 KFIDTASKFGHGRF 591
           KFIDT+SK GHGRF
Sbjct: 353 KFIDTSSKMGHGRF 366


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  352 bits (866), Expect = 2e-97
 Identities = 159/194 (81%), Positives = 171/194 (88%)
 Frame = +1

Query: 10  NGGTIEDKVKWAREHLEKPIPIDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTH 189
           NGG+IEDKVKWAREHLEKPI + +VF QDEMIDC+            SRWHTKKLPRKTH
Sbjct: 186 NGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTH 245

Query: 190 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNAST 369
           KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIHTKDGKVIKNNAST
Sbjct: 246 KGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNAST 305

Query: 370 EYDFSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKIDL 549
           EYD ++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKR+ITLRKSL  HTKR+ALE+I L
Sbjct: 306 EYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKL 365

Query: 550 KFIDTASKFGHGRF 591
           KFIDT+SK GHGRF
Sbjct: 366 KFIDTSSKMGHGRF 379


>AE014134-928|AAN10543.1|  612|Drosophila melanogaster CG31915-PA
           protein.
          Length = 612

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/39 (35%), Positives = 27/39 (69%)
 Frame = -1

Query: 542 IFSNAALLVCTRRDFLKVMTRFLGPMQQPLIITKSLFTS 426
           +F   A ++ T +D LKV+TR   P+  P++I++SL+++
Sbjct: 140 VFFLDADVLLTSKDSLKVLTRLQLPIVAPMLISESLYSN 178


>AE014296-1325|AAF50514.2| 1066|Drosophila melanogaster CG32369-PA,
           isoform A protein.
          Length = 1066

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 273 LSSPNRNEQEDISYWARYPHQGWKSYQEQ 359
           + SP  +E+ D+  W+RY HQG ++  EQ
Sbjct: 110 VKSPRISERLDMMPWSRYHHQGKQNQAEQ 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,027,969
Number of Sequences: 53049
Number of extensions: 655491
Number of successful extensions: 1526
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1526
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)