Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_E10
(593 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 291 2e-79
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 291 2e-79
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 291 2e-79
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 291 2e-79
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 291 2e-79
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 291 2e-79
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 243 7e-65
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 243 7e-65
U64848-3|AAB04882.1| 323|Caenorhabditis elegans Hypothetical pr... 33 0.15
AC006629-9|ABC48255.1| 319|Caenorhabditis elegans Hypothetical ... 29 1.9
Z81124-8|CAD56599.1| 426|Caenorhabditis elegans Hypothetical pr... 29 2.5
U50301-11|AAB37048.1| 269|Caenorhabditis elegans Hypothetical p... 29 3.3
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL032626-27|CAA21541.1| 271|Caenorhabditis elegans Hypothetical... 29 3.3
Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z82056-5|CAB04856.1| 378|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z81129-9|CAB03410.1| 378|Caenorhabditis elegans Hypothetical pr... 27 7.6
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 291 bits (714), Expect = 2e-79
Identities = 134/194 (69%), Positives = 156/194 (80%)
Frame = +1
Query: 10 NGGTIEDKVKWAREHLEKPIPIDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTH 189
NGGTIE KV WAREHLEK + +D+VFAQDEMID I SRWHTKKLPRKTH
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 190 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNAST 369
KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ T++G KNN ST
Sbjct: 246 KGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGST 302
Query: 370 EYDFSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKIDL 549
E+D ++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKI+L
Sbjct: 303 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINL 362
Query: 550 KFIDTASKFGHGRF 591
K+IDT+SK GHGRF
Sbjct: 363 KWIDTSSKTGHGRF 376
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 291 bits (714), Expect = 2e-79
Identities = 134/194 (69%), Positives = 156/194 (80%)
Frame = +1
Query: 10 NGGTIEDKVKWAREHLEKPIPIDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTH 189
NGGTIE KV WAREHLEK + +D+VFAQDEMID I SRWHTKKLPRKTH
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 190 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNAST 369
KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ T++G KNN ST
Sbjct: 246 KGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGST 302
Query: 370 EYDFSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKIDL 549
E+D ++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKI+L
Sbjct: 303 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINL 362
Query: 550 KFIDTASKFGHGRF 591
K+IDT+SK GHGRF
Sbjct: 363 KWIDTSSKTGHGRF 376
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 291 bits (714), Expect = 2e-79
Identities = 134/194 (69%), Positives = 156/194 (80%)
Frame = +1
Query: 10 NGGTIEDKVKWAREHLEKPIPIDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTH 189
NGGTIE KV WAREHLEK + +D+VFAQDEMID I SRWHTKKLPRKTH
Sbjct: 88 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 147
Query: 190 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNAST 369
KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ T++G KNN ST
Sbjct: 148 KGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGST 204
Query: 370 EYDFSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKIDL 549
E+D ++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKI+L
Sbjct: 205 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINL 264
Query: 550 KFIDTASKFGHGRF 591
K+IDT+SK GHGRF
Sbjct: 265 KWIDTSSKTGHGRF 278
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 291 bits (714), Expect = 2e-79
Identities = 134/194 (69%), Positives = 156/194 (80%)
Frame = +1
Query: 10 NGGTIEDKVKWAREHLEKPIPIDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTH 189
NGGTIE KV WAREHLEK + +D+VFAQDEMID I SRWHTKKLPRKTH
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 190 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNAST 369
KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ T++G KNN ST
Sbjct: 246 KGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGST 302
Query: 370 EYDFSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKIDL 549
E+D ++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKI+L
Sbjct: 303 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINL 362
Query: 550 KFIDTASKFGHGRF 591
K+IDT+SK GHGRF
Sbjct: 363 KWIDTSSKTGHGRF 376
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 291 bits (714), Expect = 2e-79
Identities = 134/194 (69%), Positives = 156/194 (80%)
Frame = +1
Query: 10 NGGTIEDKVKWAREHLEKPIPIDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTH 189
NGGTIE KV WAREHLEK + +D+VFAQDEMID I SRWHTKKLPRKTH
Sbjct: 88 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 147
Query: 190 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNAST 369
KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ T++G KNN ST
Sbjct: 148 KGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGST 204
Query: 370 EYDFSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKIDL 549
E+D ++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKI+L
Sbjct: 205 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINL 264
Query: 550 KFIDTASKFGHGRF 591
K+IDT+SK GHGRF
Sbjct: 265 KWIDTSSKTGHGRF 278
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 291 bits (714), Expect = 2e-79
Identities = 134/194 (69%), Positives = 156/194 (80%)
Frame = +1
Query: 10 NGGTIEDKVKWAREHLEKPIPIDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTH 189
NGGTIE KV WAREHLEK + +D+VFAQDEMID I SRWHTKKLPRKTH
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 190 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNAST 369
KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ T++G KNN ST
Sbjct: 246 KGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGST 302
Query: 370 EYDFSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKIDL 549
E+D ++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKI+L
Sbjct: 303 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINL 362
Query: 550 KFIDTASKFGHGRF 591
K+IDT+SK GHGRF
Sbjct: 363 KWIDTSSKTGHGRF 376
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 243 bits (595), Expect = 7e-65
Identities = 113/170 (66%), Positives = 133/170 (78%)
Frame = +1
Query: 82 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 261
V A +MID I SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 262 GQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNASTEYDFSEKSITPMGGFPHYGEVNND 441
GQKG+HHRT +N KIYRIG+ T++G KNN STE+D ++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 442 FVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKIDLKFIDTASKFGHGRF 591
++M++G +GPKKR+ITLRKSL TKR A EKI+LK+IDT+SK GHGRF
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRF 328
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 243 bits (595), Expect = 7e-65
Identities = 113/170 (66%), Positives = 133/170 (78%)
Frame = +1
Query: 82 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 261
V A +MID I SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 262 GQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNASTEYDFSEKSITPMGGFPHYGEVNND 441
GQKG+HHRT +N KIYRIG+ T++G KNN STE+D ++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 442 FVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKIDLKFIDTASKFGHGRF 591
++M++G +GPKKR+ITLRKSL TKR A EKI+LK+IDT+SK GHGRF
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRF 328
>U64848-3|AAB04882.1| 323|Caenorhabditis elegans Hypothetical
protein C50E3.7 protein.
Length = 323
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = -3
Query: 345 FSILGVDTLPNTIYLLVHFCSVMIALLTSTSHSERNS*RMPCSNTSNFTETLVSFTRQFL 166
F IL + ++ + +H ++ I + S + S + CS ++ S T FL
Sbjct: 115 FKILLIQCFVVSLRVFLHILTICIIIYVSNTESSVSKFLSQCSLYVDYCSNFFSLTVTFL 174
Query: 165 CVPTRCNTFVSFT 127
RC FVS+T
Sbjct: 175 MSLNRCFCFVSYT 187
>AC006629-9|ABC48255.1| 319|Caenorhabditis elegans Hypothetical
protein F12E12.10 protein.
Length = 319
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 489 DDTFLRSHATALDHHKVIVYF 427
DD FLR H + +HKVI+ F
Sbjct: 135 DDRFLRDHLSGFSYHKVIIDF 155
>Z81124-8|CAD56599.1| 426|Caenorhabditis elegans Hypothetical
protein T21B4.14 protein.
Length = 426
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Frame = -3
Query: 207 NFTETLVSFTRQF---LCVPTRCNTFVSFTLSDTNAVNHLILSKYR---INGNRF 61
+F+ + SF+ F L VPT F FT+S V+ ++L K R I GN+F
Sbjct: 168 SFSPYMASFSAGFCSDLGVPTAIQLFTMFTISSVVQVSIIMLFKNRSNFIKGNKF 222
>U50301-11|AAB37048.1| 269|Caenorhabditis elegans Hypothetical
protein F20D6.1 protein.
Length = 269
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 122 LRVKDTKVLHLVGTQRNCRVKLTRVSVKLLVLEHGILQE 238
LR+ DT++L L TQ R ++ V +++E + QE
Sbjct: 139 LRIDDTEILDLPTTQNALRTGFSKNGVVTIIVERAVHQE 177
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 154 RWHTKKLP-RKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRI 315
RW + P R+T K R++ +G+ +R+ G GY RT +I RI
Sbjct: 241 RWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIVRI 295
>AL032626-27|CAA21541.1| 271|Caenorhabditis elegans Hypothetical
protein Y37D8A.17 protein.
Length = 271
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 363 SIVLDNFSILGVDTLPNTIYLLVHFCSVMIALLTSTSHS 247
S+V + + + LP TIY +H C+ M +L T H+
Sbjct: 124 SVVFLMAAPVSMAALPVTIYAALHACTFMTKILRETGHT 162
>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical
protein F12F6.5 protein.
Length = 1059
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 202 KVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTK 336
K A +G+ SFT G + +H E K RIG GI TK
Sbjct: 471 KSASVGSASERNGSFTTENGGSQNHHLLEERRSKARRIG-GIVTK 514
>Z82056-5|CAB04856.1| 378|Caenorhabditis elegans Hypothetical
protein T26H5.5 protein.
Length = 378
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 398 VMDFSEKSYSVEALFLITFPSLVW-IPCPIRY 306
+ D E Y + LFLIT P ++ IP RY
Sbjct: 152 ISDLIESKYGIRVLFLITLPIIILSIPKYFRY 183
>Z81129-9|CAB03410.1| 378|Caenorhabditis elegans Hypothetical
protein T26H5.5 protein.
Length = 378
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 398 VMDFSEKSYSVEALFLITFPSLVW-IPCPIRY 306
+ D E Y + LFLIT P ++ IP RY
Sbjct: 152 ISDLIESKYGIRVLFLITLPIIILSIPKYFRY 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,239,045
Number of Sequences: 27780
Number of extensions: 332991
Number of successful extensions: 867
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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