Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_E09
(602 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 243 4e-64
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 243 4e-64
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 243 4e-64
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 243 4e-64
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 195 1e-49
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 56 7e-08
AK223559-1|BAD97279.1| 693|Homo sapiens hypothetical protein LO... 32 1.4
BC053562-1|AAH53562.1| 693|Homo sapiens CREB regulated transcri... 31 2.4
AY360172-1|AAQ98857.1| 693|Homo sapiens transducer of regulated... 31 2.4
AL358472-4|CAI14018.1| 373|Homo sapiens transducer of regulated... 31 2.4
AL358472-3|CAI14017.1| 693|Homo sapiens transducer of regulated... 31 2.4
AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protei... 31 4.1
S45875-1|AAB23549.1| 417|Homo sapiens lysyl oxidase protein. 30 5.4
M94054-1|AAA59525.1| 417|Homo sapiens lysyl oxidase protein. 30 5.4
X68596-1|CAA48589.1| 593|Homo sapiens parathyroid hormone recep... 30 7.2
U22409-1|AAB60657.1| 593|Homo sapiens parathyroid hormone/PTH-r... 30 7.2
U17418-1|AAA56774.1| 593|Homo sapiens parathyroid hormone/parat... 30 7.2
L04308-1|AAA36525.1| 593|Homo sapiens parathyroid hormone recep... 30 7.2
BC112247-1|AAI12248.1| 593|Homo sapiens parathyroid hormone rec... 30 7.2
BC112221-1|AAI12222.1| 593|Homo sapiens parathyroid hormone rec... 30 7.2
BC110388-1|AAI10389.1| 593|Homo sapiens parathyroid hormone rec... 30 7.2
AY449732-1|AAR18076.1| 593|Homo sapiens parathyroid hormone rec... 30 7.2
AB065462-1|BAC05721.1| 964|Homo sapiens seven transmembrane hel... 30 7.2
AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid ... 29 9.5
AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid ... 29 9.5
AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid ... 29 9.5
AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid ... 29 9.5
AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid ... 29 9.5
AF347021-1|AAK18311.1| 1300|Homo sapiens C2H2 zinc finger protei... 29 9.5
AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein... 29 9.5
AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related prot... 29 9.5
AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein. 29 9.5
AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein. 29 9.5
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 243 bits (594), Expect = 4e-64
Identities = 121/178 (67%), Positives = 141/178 (79%), Gaps = 4/178 (2%)
Frame = +3
Query: 81 MGISRDHWHKR---GLRRQTCAHS*KRKYDRS-PGCNTKLGPQRIHLVRSRGGNTKYRAL 248
MGISRD+WHKR G +R+ H KRKY+ P NTK+GP+RIH VR RGGN KYRAL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPY-HK-KRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRAL 58
Query: 249 RLDTGNFAFGDLNCSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHY 428
RLD GNF++G C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY
Sbjct: 59 RLDVGNFSWGS-ECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHY 117
Query: 429 LLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACV 602
LPLGRKKGAKLT EE I+NKKRS+K KKY R++ +K+ LEEQF G+LLAC+
Sbjct: 118 ALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACI 175
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 243 bits (594), Expect = 4e-64
Identities = 121/178 (67%), Positives = 141/178 (79%), Gaps = 4/178 (2%)
Frame = +3
Query: 81 MGISRDHWHKR---GLRRQTCAHS*KRKYDRS-PGCNTKLGPQRIHLVRSRGGNTKYRAL 248
MGISRD+WHKR G +R+ H KRKY+ P NTK+GP+RIH VR RGGN KYRAL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPY-HK-KRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRAL 58
Query: 249 RLDTGNFAFGDLNCSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHY 428
RLD GNF++G C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY
Sbjct: 59 RLDVGNFSWGS-ECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHY 117
Query: 429 LLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACV 602
LPLGRKKGAKLT EE I+NKKRS+K KKY R++ +K+ LEEQF G+LLAC+
Sbjct: 118 ALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACI 175
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 243 bits (594), Expect = 4e-64
Identities = 121/178 (67%), Positives = 141/178 (79%), Gaps = 4/178 (2%)
Frame = +3
Query: 81 MGISRDHWHKR---GLRRQTCAHS*KRKYDRS-PGCNTKLGPQRIHLVRSRGGNTKYRAL 248
MGISRD+WHKR G +R+ H KRKY+ P NTK+GP+RIH VR RGGN KYRAL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPY-HK-KRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRAL 58
Query: 249 RLDTGNFAFGDLNCSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHY 428
RLD GNF++G C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY
Sbjct: 59 RLDVGNFSWGS-ECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHY 117
Query: 429 LLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACV 602
LPLGRKKGAKLT EE I+NKKRS+K KKY R++ +K+ LEEQF G+LLAC+
Sbjct: 118 ALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACI 175
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 243 bits (594), Expect = 4e-64
Identities = 121/178 (67%), Positives = 141/178 (79%), Gaps = 4/178 (2%)
Frame = +3
Query: 81 MGISRDHWHKR---GLRRQTCAHS*KRKYDRS-PGCNTKLGPQRIHLVRSRGGNTKYRAL 248
MGISRD+WHKR G +R+ H KRKY+ P NTK+GP+RIH VR RGGN KYRAL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPY-HK-KRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRAL 58
Query: 249 RLDTGNFAFGDLNCSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHY 428
RLD GNF++G C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY
Sbjct: 59 RLDVGNFSWGS-ECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHY 117
Query: 429 LLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACV 602
LPLGRKKGAKLT EE I+NKKRS+K KKY R++ +K+ LEEQF G+LLAC+
Sbjct: 118 ALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACI 175
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 195 bits (475), Expect = 1e-49
Identities = 108/178 (60%), Positives = 126/178 (70%), Gaps = 4/178 (2%)
Frame = +3
Query: 81 MGISRDHWHKR---GLRRQTCAHS*KRKYDRS-PGCNTKLGPQRIHLVRSRGGNTKYRAL 248
MGISRD+WHKR G +R+ H KRKY+ P NTK+GP+RIH VR RGG
Sbjct: 1 MGISRDNWHKRRKTGGKRKPY-HK-KRKYELGRPAANTKIGPRRIHTVRVRGG------- 51
Query: 249 RLDTGNFAFGDLNCSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHY 428
C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY
Sbjct: 52 -------------C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHY 97
Query: 429 LLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACV 602
LPLGRKKGAKLT EE I+NKKRS+K KKY R++ +K+ LEEQF G+LLAC+
Sbjct: 98 ALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACI 155
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 56.4 bits (130), Expect = 7e-08
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +3
Query: 462 LTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACV 602
LT EE I+NKKRS+K KKY R++ +K+ LEEQF G+LLAC+
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACI 47
>AK223559-1|BAD97279.1| 693|Homo sapiens hypothetical protein
LOC200186 variant protein.
Length = 693
Score = 32.3 bits (70), Expect = 1.4
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 191 TKLSVAAGRPIILPLLRMGARLPP*PSLMP--MITTDTHLPRPNSQPGIHSLDAATRGA 21
T S+ G P+ L RLPP P P ++ T +H P+ QPG+ S + + +
Sbjct: 462 TLSSITQGVPLDTSKLSTDQRLPPYPYSSPSLVLPTQSHTPKSLQQPGLPSQSCSVQSS 520
>BC053562-1|AAH53562.1| 693|Homo sapiens CREB regulated
transcription coactivator 2 protein.
Length = 693
Score = 31.5 bits (68), Expect = 2.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -1
Query: 191 TKLSVAAGRPIILPLLRMGARLPP*PSLMP--MITTDTHLPRPNSQPGIHSLDAATRGA 21
T S+ G P+ L RLPP P P ++ T H P+ QPG+ S + + +
Sbjct: 462 TLSSITQGVPLDTSKLSTDQRLPPYPYSSPSLVLPTQPHTPKSLQQPGLPSQSCSVQSS 520
>AY360172-1|AAQ98857.1| 693|Homo sapiens transducer of regulated
CREB protein 2 protein.
Length = 693
Score = 31.5 bits (68), Expect = 2.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -1
Query: 191 TKLSVAAGRPIILPLLRMGARLPP*PSLMP--MITTDTHLPRPNSQPGIHSLDAATRGA 21
T S+ G P+ L RLPP P P ++ T H P+ QPG+ S + + +
Sbjct: 462 TLSSITQGVPLDTSKLSTDQRLPPYPYSSPSLVLPTQPHTPKSLQQPGLPSQSCSVQSS 520
>AL358472-4|CAI14018.1| 373|Homo sapiens transducer of regulated
cAMP response element-binding protein (CREB) 2 (TORC2)
protein.
Length = 373
Score = 31.5 bits (68), Expect = 2.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -1
Query: 191 TKLSVAAGRPIILPLLRMGARLPP*PSLMP--MITTDTHLPRPNSQPGIHSLDAATRGA 21
T S+ G P+ L RLPP P P ++ T H P+ QPG+ S + + +
Sbjct: 142 TLSSITQGVPLDTSKLSTDQRLPPYPYSSPSLVLPTQPHTPKSLQQPGLPSQSCSVQSS 200
>AL358472-3|CAI14017.1| 693|Homo sapiens transducer of regulated
cAMP response element-binding protein (CREB) 2 (TORC2)
protein.
Length = 693
Score = 31.5 bits (68), Expect = 2.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -1
Query: 191 TKLSVAAGRPIILPLLRMGARLPP*PSLMP--MITTDTHLPRPNSQPGIHSLDAATRGA 21
T S+ G P+ L RLPP P P ++ T H P+ QPG+ S + + +
Sbjct: 462 TLSSITQGVPLDTSKLSTDQRLPPYPYSSPSLVLPTQPHTPKSLQQPGLPSQSCSVQSS 520
>AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protein
ARP protein.
Length = 995
Score = 30.7 bits (66), Expect = 4.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 146 LRMGARLPP*PSLMPMITTDTHLPRPNSQP 57
L M A LPP P+L P+ + TH P P++ P
Sbjct: 386 LSMNANLPPPPALKPLSSLSTHHP-PSAHP 414
>S45875-1|AAB23549.1| 417|Homo sapiens lysyl oxidase protein.
Length = 417
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +3
Query: 249 RLDTGNFAFGDLNCSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPF-RQWYESH 425
R D G G N S ++ R ++ + RT+T + + P R W+++
Sbjct: 69 RRDPGAAVPGAANASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPTARHWFQAG 128
Query: 426 YLLPLGRKKGAKLTEAEEA 482
Y R++GA E + A
Sbjct: 129 YSTSRARERGASRAENQTA 147
>M94054-1|AAA59525.1| 417|Homo sapiens lysyl oxidase protein.
Length = 417
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +3
Query: 249 RLDTGNFAFGDLNCSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPF-RQWYESH 425
R D G G N S ++ R ++ + RT+T + + P R W+++
Sbjct: 69 RRDPGAAVPGAANASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPTARHWFQAG 128
Query: 426 YLLPLGRKKGAKLTEAEEA 482
Y R++GA E + A
Sbjct: 129 YSTSRARERGASRAENQTA 147
>X68596-1|CAA48589.1| 593|Homo sapiens parathyroid hormone receptor
protein.
Length = 593
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 143 RMGARLPP*PSLMPMITTDTHLPRP-NSQPGIHSLDAATRGAPAL 12
R+G LP P L+P TT+ H P +++PG +L+ PA+
Sbjct: 511 RVGLGLPLSPRLLPTATTNGHPQLPGHAKPGTPALETLETTPPAM 555
>U22409-1|AAB60657.1| 593|Homo sapiens parathyroid
hormone/PTH-related peptide receptor protein.
Length = 593
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 143 RMGARLPP*PSLMPMITTDTHLPRP-NSQPGIHSLDAATRGAPAL 12
R+G LP P L+P TT+ H P +++PG +L+ PA+
Sbjct: 511 RVGLGLPLSPRLLPTATTNGHPQLPGHAKPGTPALETLETTPPAM 555
>U17418-1|AAA56774.1| 593|Homo sapiens parathyroid
hormone/parathyroid hormone related peptide receptor
protein.
Length = 593
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 143 RMGARLPP*PSLMPMITTDTHLPRP-NSQPGIHSLDAATRGAPAL 12
R+G LP P L+P TT+ H P +++PG +L+ PA+
Sbjct: 511 RVGLGLPLSPRLLPTATTNGHPQLPGHAKPGTPALETLETTPPAM 555
>L04308-1|AAA36525.1| 593|Homo sapiens parathyroid hormone receptor
protein.
Length = 593
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 143 RMGARLPP*PSLMPMITTDTHLPRP-NSQPGIHSLDAATRGAPAL 12
R+G LP P L+P TT+ H P +++PG +L+ PA+
Sbjct: 511 RVGLGLPLSPRLLPTATTNGHPQLPGHAKPGTPALETLETTPPAM 555
>BC112247-1|AAI12248.1| 593|Homo sapiens parathyroid hormone
receptor 1, precursor protein.
Length = 593
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 143 RMGARLPP*PSLMPMITTDTHLPRP-NSQPGIHSLDAATRGAPAL 12
R+G LP P L+P TT+ H P +++PG +L+ PA+
Sbjct: 511 RVGLGLPLSPRLLPTATTNGHPQLPGHAKPGTPALETLETTPPAM 555
>BC112221-1|AAI12222.1| 593|Homo sapiens parathyroid hormone
receptor 1, precursor protein.
Length = 593
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 143 RMGARLPP*PSLMPMITTDTHLPRP-NSQPGIHSLDAATRGAPAL 12
R+G LP P L+P TT+ H P +++PG +L+ PA+
Sbjct: 511 RVGLGLPLSPRLLPTATTNGHPQLPGHAKPGTPALETLETTPPAM 555
>BC110388-1|AAI10389.1| 593|Homo sapiens parathyroid hormone
receptor 1 protein.
Length = 593
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 143 RMGARLPP*PSLMPMITTDTHLPRP-NSQPGIHSLDAATRGAPAL 12
R+G LP P L+P TT+ H P +++PG +L+ PA+
Sbjct: 511 RVGLGLPLSPRLLPTATTNGHPQLPGHAKPGTPALETLETTPPAM 555
>AY449732-1|AAR18076.1| 593|Homo sapiens parathyroid hormone
receptor 1 protein.
Length = 593
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 143 RMGARLPP*PSLMPMITTDTHLPRP-NSQPGIHSLDAATRGAPAL 12
R+G LP P L+P TT+ H P +++PG +L+ PA+
Sbjct: 511 RVGLGLPLSPRLLPTATTNGHPQLPGHAKPGTPALETLETTPPAM 555
>AB065462-1|BAC05721.1| 964|Homo sapiens seven transmembrane helix
receptor protein.
Length = 964
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 143 RMGARLPP*PSLMPMITTDTHLPRP-NSQPGIHSLDAATRGAPAL 12
R+G LP P L+P TT+ H P +++PG +L+ PA+
Sbjct: 816 RVGLGLPLSPRLLPTATTNGHPQLPGHAKPGTPALETLETTPPAM 860
>AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 140 MGARLPP*PSLMPMITTDTHLPRPNSQP 57
M A LPP P+L P+ + TH P P++ P
Sbjct: 959 MNANLPPPPALKPLSSLSTHHP-PSAHP 985
>AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 140 MGARLPP*PSLMPMITTDTHLPRPNSQP 57
M A LPP P+L P+ + TH P P++ P
Sbjct: 691 MNANLPPPPALKPLSSLSTHHP-PSAHP 717
>AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 140 MGARLPP*PSLMPMITTDTHLPRPNSQP 57
M A LPP P+L P+ + TH P P++ P
Sbjct: 959 MNANLPPPPALKPLSSLSTHHP-PSAHP 985
>AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 140 MGARLPP*PSLMPMITTDTHLPRPNSQP 57
M A LPP P+L P+ + TH P P++ P
Sbjct: 691 MNANLPPPPALKPLSSLSTHHP-PSAHP 717
>AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 140 MGARLPP*PSLMPMITTDTHLPRPNSQP 57
M A LPP P+L P+ + TH P P++ P
Sbjct: 959 MNANLPPPPALKPLSSLSTHHP-PSAHP 985
>AF347021-1|AAK18311.1| 1300|Homo sapiens C2H2 zinc finger protein
protein.
Length = 1300
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -1
Query: 131 RLPP*PSLMPMITTDTHLPRPNSQPGIHSLDAATRGAPA 15
R PP PSL P P P+ PG+ +L + GAPA
Sbjct: 235 RPPPRPSLSPAAAPSAPGPAPSQLPGLAALPLSA-GAPA 272
>AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein
protein.
Length = 1012
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 140 MGARLPP*PSLMPMITTDTHLPRPNSQP 57
M A LPP P+L P+ + TH P P++ P
Sbjct: 405 MNANLPPPPALKPLSSLSTHHP-PSAHP 431
>AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related protein
protein.
Length = 1012
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 140 MGARLPP*PSLMPMITTDTHLPRPNSQP 57
M A LPP P+L P+ + TH P P++ P
Sbjct: 405 MNANLPPPPALKPLSSLSTHHP-PSAHP 431
>AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.
Length = 1566
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 140 MGARLPP*PSLMPMITTDTHLPRPNSQP 57
M A LPP P+L P+ + TH P P++ P
Sbjct: 959 MNANLPPPPALKPLSSLSTHHP-PSAHP 985
>AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.
Length = 1552
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 140 MGARLPP*PSLMPMITTDTHLPRPNSQP 57
M A LPP P+L P+ + TH P P++ P
Sbjct: 945 MNANLPPPPALKPLSSLSTHHP-PSAHP 971
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,406,426
Number of Sequences: 237096
Number of extensions: 2686615
Number of successful extensions: 5733
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 5483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5718
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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