Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_E09
(602 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 264 5e-73
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 25 0.43
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 24 1.3
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 23 3.0
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 5.3
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.0
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 7.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.3
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 21 9.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.3
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 9.3
AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein. 21 9.3
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 264 bits (647), Expect = 5e-73
Identities = 129/178 (72%), Positives = 147/178 (82%), Gaps = 4/178 (2%)
Frame = +3
Query: 81 MGISRDHWHKR---GLRRQTCAHS*KRKYDRS-PGCNTKLGPQRIHLVRSRGGNTKYRAL 248
MGISRDHWHKR G +R+ KRK++ P NTKLGPQRIH VR+RGGN KYRAL
Sbjct: 1 MGISRDHWHKRRATGGKRKPIRK--KRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRAL 58
Query: 249 RLDTGNFAFGDLNCSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHY 428
RLDTGNF++G C+TRKTRIIDVVYNASNNELVRTKTLVKNAIV +DATPFRQWYE HY
Sbjct: 59 RLDTGNFSWGS-ECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHY 117
Query: 429 LLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACV 602
+LPLGRK+GAKLTEAEE ++NKKRS+K KY +RQR +KVE LEEQF TGR+LAC+
Sbjct: 118 VLPLGRKRGAKLTEAEEEVLNKKRSKKAEAKYKARQRFAKVEPALEEQFATGRVLACI 175
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 25.4 bits (53), Expect = 0.43
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3
Query: 600 HMLTAVQCGIAPPDHPLPWTGAACSGTS 517
H V + PP+ P+P +AC G++
Sbjct: 169 HQFQTVVASMDPPEPPVPTVTSACVGSA 196
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 23.8 bits (49), Expect = 1.3
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 232 LNIVPCVLILETSHLGI*IVQPARLVLLMLFIM-PLTMNWCVPKPW 366
L ++ C + S + I ++ A LL+ F+M PL + W + W
Sbjct: 59 LILITCRKRVSKSRIHIMLMHLAIADLLVTFLMMPLEIGWAITVSW 104
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 329 IINNINNTSLAG*TIQI 279
+INN NNTS+ G T++I
Sbjct: 488 VINNRNNTSMKG-TVRI 503
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.8 bits (44), Expect = 5.3
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 307 VLLMLFIMPLTMNWCVPKPW*RMLLSWWMPHL 402
VL + F P T N PW R + WMP L
Sbjct: 333 VLNVHFRSPSTHNM---SPWVRQVFLNWMPRL 361
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 7.0
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +3
Query: 282 LNCSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 410
+N RK + +VVY N + + V + I ++ A+P ++
Sbjct: 353 VNYVGRKRPMHNVVYRPGENPVTQRLPAVLSRIGIILASPLKR 395
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +3
Query: 447 KKGAKLTEAEEAIINKKRSQKTAKKY 524
KKG+ +T+ +I + ++K K+Y
Sbjct: 517 KKGSFVTQYVGEVITNEEAEKRGKEY 542
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 238 IVPCVLILETSHLGI*IVQPA--RLVLLMLFIMPLTM 342
IVPCVLI + LG + + +L L + ++ LT+
Sbjct: 202 IVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTV 238
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 238 IVPCVLILETSHLGI*IVQPA--RLVLLMLFIMPLTM 342
IVPCVLI + LG + + +L L + ++ LT+
Sbjct: 202 IVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTV 238
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 238 IVPCVLILETSHLGI*IVQPA--RLVLLMLFIMPLTM 342
IVPCVLI + LG + + +L L + ++ LT+
Sbjct: 202 IVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTV 238
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 238 IVPCVLILETSHLGI*IVQPA--RLVLLMLFIMPLTM 342
IVPCVLI + LG + + +L L + ++ LT+
Sbjct: 202 IVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTV 238
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 238 IVPCVLILETSHLGI*IVQPA--RLVLLMLFIMPLTM 342
IVPCVLI + LG + + +L L + ++ LT+
Sbjct: 202 IVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTV 238
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 238 IVPCVLILETSHLGI*IVQPA--RLVLLMLFIMPLTM 342
IVPCVLI + LG + + +L L + ++ LT+
Sbjct: 202 IVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTV 238
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 21.0 bits (42), Expect = 9.3
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +3
Query: 282 LNCSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYL 431
++C TR + + D + + + + +T A V ++A QW E+ L
Sbjct: 20 VHCGTRPSFVSDEMIATAASVVNACQTQTGVATVDIEAVRNGQWPETRQL 69
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 9.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 238 IVPCVLILETSHLGI*IVQPA--RLVLLMLFIMPLTM 342
IVPCVLI + LG + + +L L + ++ LT+
Sbjct: 270 IVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTV 306
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 9.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 238 IVPCVLILETSHLGI*IVQPA--RLVLLMLFIMPLTM 342
IVPCVLI + LG + + +L L + ++ LT+
Sbjct: 270 IVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTV 306
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 238 IVPCVLILETSHLG 279
IVPCVLI + LG
Sbjct: 239 IVPCVLIASMAVLG 252
>AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein.
Length = 50
Score = 21.0 bits (42), Expect = 9.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 597 MLTAVQCGIAPPDH 556
M+ A+ C I P DH
Sbjct: 21 MIWALDCSIKPKDH 34
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,394
Number of Sequences: 438
Number of extensions: 4634
Number of successful extensions: 25
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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