Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_E08
(535 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF175689-1|AAD51842.1| 1048|Drosophila melanogaster heparan sulf... 291 4e-79
AE014296-1120|AAF50658.1| 1048|Drosophila melanogaster CG8339-PA... 291 4e-79
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 29 5.3
AE014135-142|AAF59408.1| 580|Drosophila melanogaster CG11153-PA... 29 5.3
AE014135-141|AAX52518.1| 618|Drosophila melanogaster CG11153-PB... 29 5.3
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 28 7.0
U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag p... 28 7.0
BT010247-1|AAQ23565.1| 1508|Drosophila melanogaster RE40452p pro... 28 7.0
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 28 7.0
AJ312135-1|CAC39164.1| 1531|Drosophila melanogaster turtle prote... 28 7.0
AJ312134-1|CAC39163.1| 903|Drosophila melanogaster turtle prote... 28 7.0
AE014134-717|AAF51030.3| 903|Drosophila melanogaster CG15427-PC... 28 7.0
AE014134-716|AAN11173.1| 902|Drosophila melanogaster CG15427-PE... 28 7.0
AE014134-715|AAF51029.3| 1508|Drosophila melanogaster CG15427-PD... 28 7.0
AY119100-1|AAM50960.1| 384|Drosophila melanogaster RE01736p pro... 28 9.2
AE014298-2824|AAF48941.1| 384|Drosophila melanogaster CG7890-PA... 28 9.2
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC... 28 9.2
>AF175689-1|AAD51842.1| 1048|Drosophila melanogaster heparan sulfate
N-deacetylase/N-sulfotransferase homolog protein.
Length = 1048
Score = 291 bits (714), Expect = 4e-79
Identities = 122/176 (69%), Positives = 152/176 (86%)
Frame = +2
Query: 8 ARLRRGFRHRGVMVLPRQTCGLFTHTLLLERYPGGRHRLDRSIQGGELFQTVINNPINVF 187
ARLRRGF HR +MVLPRQTCGLFTHT+ ++RYPGGR +LD SIQGGELFQT++ NPIN+F
Sbjct: 621 ARLRRGFIHRNIMVLPRQTCGLFTHTMYIDRYPGGRDKLDESIQGGELFQTIVYNPINIF 680
Query: 188 MTHMSNYGNDRLALYTFESVVKFLRCWTNVRLASAPPLTLAEKYFQLRPDELNPLWGNPC 367
MTHMSNYG+DRLALYTF+SV+KFL+CWTN++LASAPP+ LAE YF+L P+E++P+WGNPC
Sbjct: 681 MTHMSNYGSDRLALYTFQSVIKFLQCWTNLKLASAPPVQLAEMYFRLHPEEVDPVWGNPC 740
Query: 368 DDIRHRRIWAKSKWCGTLPKLLVVGPQKTGSTALYTFLAMHXXXXXXXXXXXXYEE 535
DD+RH++IW+K+K C +LPK LV+GPQKTG+TALYTFL+MH +EE
Sbjct: 741 DDVRHKKIWSKTKNCDSLPKFLVIGPQKTGTTALYTFLSMHGSIASNIASPETFEE 796
>AE014296-1120|AAF50658.1| 1048|Drosophila melanogaster CG8339-PA
protein.
Length = 1048
Score = 291 bits (714), Expect = 4e-79
Identities = 122/176 (69%), Positives = 152/176 (86%)
Frame = +2
Query: 8 ARLRRGFRHRGVMVLPRQTCGLFTHTLLLERYPGGRHRLDRSIQGGELFQTVINNPINVF 187
ARLRRGF HR +MVLPRQTCGLFTHT+ ++RYPGGR +LD SIQGGELFQT++ NPIN+F
Sbjct: 621 ARLRRGFIHRNIMVLPRQTCGLFTHTMYIDRYPGGRDKLDESIQGGELFQTIVYNPINIF 680
Query: 188 MTHMSNYGNDRLALYTFESVVKFLRCWTNVRLASAPPLTLAEKYFQLRPDELNPLWGNPC 367
MTHMSNYG+DRLALYTF+SV+KFL+CWTN++LASAPP+ LAE YF+L P+E++P+WGNPC
Sbjct: 681 MTHMSNYGSDRLALYTFQSVIKFLQCWTNLKLASAPPVQLAEMYFRLHPEEVDPVWGNPC 740
Query: 368 DDIRHRRIWAKSKWCGTLPKLLVVGPQKTGSTALYTFLAMHXXXXXXXXXXXXYEE 535
DD+RH++IW+K+K C +LPK LV+GPQKTG+TALYTFL+MH +EE
Sbjct: 741 DDVRHKKIWSKTKNCDSLPKFLVIGPQKTGTTALYTFLSMHGSIASNIASPETFEE 796
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 105 GYLSRSNVCVNKPQV--CRGNTITPLCRKPRRNLASC 1
G+ N C+ P+ C G+ ++ C KPR A+C
Sbjct: 661 GFRHAKNSCMKPPRCMKCAGDHLSSCCTKPRSTPATC 697
>AE014135-142|AAF59408.1| 580|Drosophila melanogaster CG11153-PA,
isoform A protein.
Length = 580
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 121 PMPPARISLQE*CMREQAASLPRQHHHAPVSETAS 17
PMP A+ LQ E A S+P HH P SE S
Sbjct: 73 PMPNAQQLLQLIPGHENAQSVPTHHHSHPQSEAFS 107
>AE014135-141|AAX52518.1| 618|Drosophila melanogaster CG11153-PB,
isoform B protein.
Length = 618
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 121 PMPPARISLQE*CMREQAASLPRQHHHAPVSETAS 17
PMP A+ LQ E A S+P HH P SE S
Sbjct: 111 PMPNAQQLLQLIPGHENAQSVPTHHHSHPQSEAFS 145
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -2
Query: 105 GYLSRSNVCVNKPQV--CRGNTITPLCRKPRRNLASC 1
G+ N C+ P+ C G ++ C KPR A+C
Sbjct: 653 GFRHAKNSCMRPPRCMKCAGEHLSSCCTKPRTTPATC 689
>U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag
protein protein.
Length = 921
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -2
Query: 105 GYLSRSNVCVNKPQV--CRGNTITPLCRKPRRNLASC 1
G+ N C+ P+ C G ++ C KPR A+C
Sbjct: 631 GFRHAKNSCMRPPRCMKCAGEHLSSCCTKPRTTPATC 667
>BT010247-1|AAQ23565.1| 1508|Drosophila melanogaster RE40452p
protein.
Length = 1508
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 272 NVRLASAPPLTLAEKYFQLRPDELNPLWGNP 364
NV+ A+ PP + +FQL PDE P G P
Sbjct: 735 NVKAATQPP----DSFFQLMPDEAGPKPGPP 761
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -2
Query: 105 GYLSRSNVCVNKPQV--CRGNTITPLCRKPRRNLASC 1
G+ N C+ P+ C G ++ C KPR A+C
Sbjct: 668 GFRHSKNSCMRPPRCMKCAGGHLSSCCTKPRTTPATC 704
>AJ312135-1|CAC39164.1| 1531|Drosophila melanogaster turtle protein,
isoform 4 protein.
Length = 1531
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 272 NVRLASAPPLTLAEKYFQLRPDELNPLWGNP 364
NV+ A+ PP + +FQL PDE P G P
Sbjct: 735 NVKAATQPP----DSFFQLMPDEAGPKPGPP 761
>AJ312134-1|CAC39163.1| 903|Drosophila melanogaster turtle protein,
isoform 3 protein.
Length = 903
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 272 NVRLASAPPLTLAEKYFQLRPDELNPLWGNP 364
NV+ A+ PP + +FQL PDE P G P
Sbjct: 735 NVKAATQPP----DSFFQLMPDEAGPKPGPP 761
>AE014134-717|AAF51030.3| 903|Drosophila melanogaster CG15427-PC,
isoform C protein.
Length = 903
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 272 NVRLASAPPLTLAEKYFQLRPDELNPLWGNP 364
NV+ A+ PP + +FQL PDE P G P
Sbjct: 735 NVKAATQPP----DSFFQLMPDEAGPKPGPP 761
>AE014134-716|AAN11173.1| 902|Drosophila melanogaster CG15427-PE,
isoform E protein.
Length = 902
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 272 NVRLASAPPLTLAEKYFQLRPDELNPLWGNP 364
NV+ A+ PP + +FQL PDE P G P
Sbjct: 735 NVKAATQPP----DSFFQLMPDEAGPKPGPP 761
>AE014134-715|AAF51029.3| 1508|Drosophila melanogaster CG15427-PD,
isoform D protein.
Length = 1508
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 272 NVRLASAPPLTLAEKYFQLRPDELNPLWGNP 364
NV+ A+ PP + +FQL PDE P G P
Sbjct: 735 NVKAATQPP----DSFFQLMPDEAGPKPGPP 761
>AY119100-1|AAM50960.1| 384|Drosophila melanogaster RE01736p
protein.
Length = 384
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 419 LPKLLVVGPQKTGSTALYTFLAMH 490
LP L++G +K+G+ AL F+ +H
Sbjct: 131 LPDTLIIGVKKSGTRALLEFIRLH 154
>AE014298-2824|AAF48941.1| 384|Drosophila melanogaster CG7890-PA
protein.
Length = 384
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 419 LPKLLVVGPQKTGSTALYTFLAMH 490
LP L++G +K+G+ AL F+ +H
Sbjct: 131 LPDTLIIGVKKSGTRALLEFIRLH 154
>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
protein.
Length = 4699
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 117 CLPPGYLSRSNVCVNKPQVCRGNTITP 37
C PP +L S +C++ VC G+ P
Sbjct: 2885 CPPPAHLCTSGLCIDSHYVCDGDEDCP 2911
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,097,340
Number of Sequences: 53049
Number of extensions: 583582
Number of successful extensions: 1712
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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