Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_E08
         (535 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.6  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   3.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.5  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    21   6.0  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    21   6.0  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   7.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   7.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   7.9  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   7.9  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             21   7.9  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/23 (39%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
 Frame = +2

Query: 365 CD--DIRHRRIWAKSKWCGTLPK 427
           CD   +RH +IW +  W   L K
Sbjct: 217 CDILHLRHTKIWLRPDWLFNLTK 239


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 48  TITPLCRKPRRNLAS 4
           ++TP CR+ R N+A+
Sbjct: 96  SVTPSCRRQRYNIAA 110


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +1

Query: 355  GESMRRHSSSPYMGQEQMVRHITEVVSRRAAKNR*YSSVYVPG 483
            G S++   ++PY G   + R++ E    + +       V VPG
Sbjct: 889  GRSVQLSWAAPYDGNSPIKRYVIEYKISKGSWETDIDRVLVPG 931


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +2

Query: 161 VINNPINVFMTHMSNYGND 217
           +I++  N +++++SNY ND
Sbjct: 81  IISSLSNNYISNISNYNND 99


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 311 EKYFQLRPDELNPLWGNPCDDIRHRRI 391
           +KY  LR D  N  WG+ C   + R I
Sbjct: 53  KKYRALRLDTGNFSWGSECTTRKTRII 79


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 69  ACSRIHYSWRDIRAGGIGSIALYRAASCSRL 161
           AC R H    D+ + G     L   AS +RL
Sbjct: 57  ACCRTHDMCPDVMSAGESKHGLTNTASHTRL 87


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 69  ACSRIHYSWRDIRAGGIGSIALYRAASCSRL 161
           AC R H    D+ + G     L   AS +RL
Sbjct: 62  ACCRTHDMCPDVMSAGESKHGLTNTASHTRL 92


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 69  ACSRIHYSWRDIRAGGIGSIALYRAASCSRL 161
           AC R H    D+ + G     L   AS +RL
Sbjct: 62  ACCRTHDMCPDVMSAGESKHGLTNTASHTRL 92


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 510 SXGASDGCIARNVYRAVLPVFCGPTTNNFGN 418
           S  +S   I+RN  R+    +CG   + FG+
Sbjct: 26  SQRSSGSSISRNSNRSESSGYCGRRPSTFGS 56


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 510 SXGASDGCIARNVYRAVLPVFCGPTTNNFGN 418
           S  +S   I+RN  R+    +CG   + FG+
Sbjct: 26  SQRSSGSSISRNSNRSESSGYCGRRPSTFGS 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,865
Number of Sequences: 438
Number of extensions: 3260
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)