Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_E06
(543 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73098-10|CAA97336.2| 391|Caenorhabditis elegans Hypothetical p... 36 0.025
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 33 0.18
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 32 0.31
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 32 0.31
U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical pr... 30 0.94
U97009-3|AAC69031.1| 619|Caenorhabditis elegans Hypothetical pr... 29 2.2
U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily ass... 29 2.9
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 29 2.9
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 29 2.9
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 29 2.9
AF125463-1|AAD12861.2| 263|Caenorhabditis elegans Hypothetical ... 29 2.9
AF100305-4|AAC68916.2| 426|Caenorhabditis elegans Hypothetical ... 29 2.9
AF100305-3|AAL65795.1| 426|Caenorhabditis elegans Hypothetical ... 29 2.9
Z32683-10|CAA83625.1| 381|Caenorhabditis elegans Hypothetical p... 28 5.0
AF038608-10|AAC25814.2| 327|Caenorhabditis elegans Serpentine r... 28 5.0
Z74032-2|CAA98466.2| 248|Caenorhabditis elegans Hypothetical pr... 27 6.6
AF047660-1|AAC04431.1| 900|Caenorhabditis elegans Osm-9 and cap... 27 6.6
AC024839-3|AAF60829.1| 308|Caenorhabditis elegans T box family ... 27 6.6
AC024839-2|AAF60830.1| 308|Caenorhabditis elegans Hypothetical ... 27 6.6
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z29094-15|CAA82341.3| 672|Caenorhabditis elegans Hypothetical p... 27 8.7
U97013-6|AAB52337.1| 221|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF106575-14|AAC78163.2| 365|Caenorhabditis elegans Serpentine r... 27 8.7
AF067942-6|AAG45579.1| 345|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z73098-10|CAA97336.2| 391|Caenorhabditis elegans Hypothetical
protein T21C9.9 protein.
Length = 391
Score = 35.5 bits (78), Expect = 0.025
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Frame = +3
Query: 288 TWVQPLSPNVSP---TIRY-QYMYSPYES-HKTYQLQAPQYSQPEVPIHQNMAPIPISIP 452
T+ + L+P P T Y QY P +S + YQL P+Y QP+ P Q ++ P P
Sbjct: 58 TFYRDLTPFRQPYYQTASYPQYQQGPAQSLQQMYQLPNPRYIQPQAPRPQYISR-PAPRP 116
Query: 453 AGASLTPVSLQHVQLVPCMCPVA 521
A A P +Q V PVA
Sbjct: 117 APAPYQPPRVQERPYVQPAAPVA 139
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 32.7 bits (71), Expect = 0.18
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 3/89 (3%)
Frame = +3
Query: 267 APPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVP---IHQNMAPI 437
AP + VQP+ P V P Q + P E + Q+P QP VP I AP
Sbjct: 1472 APVAPVAQPVQPIQP-VQPVQSVQSLPQPAEIPRVVVPQSPGTPQPVVPQVSIVTPQAPQ 1530
Query: 438 PISIPAGASLTPVSLQHVQLVPCMCPVAP 524
P + AS P++ + P P
Sbjct: 1531 PTAAATSASTGPIAPEPTTAAPTTTETTP 1559
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 31.9 bits (69), Expect = 0.31
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Frame = +3
Query: 258 SDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYES--HKTYQLQAPQYSQPEVPIHQNMA 431
S S P+S P+SP+ SPT SP S +Y +P YS P P + +
Sbjct: 1593 SPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTS 1651
Query: 432 P-----IPISIPAGASLTPVSLQHVQLVPCMCPVAP 524
P P P+ S +P S ++ P P +P
Sbjct: 1652 PSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSP 1687
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 31.9 bits (69), Expect = 0.31
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Frame = +3
Query: 258 SDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYES--HKTYQLQAPQYSQPEVPIHQNMA 431
S S P+S P+SP+ SPT SP S +Y +P YS P P + +
Sbjct: 1600 SPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTS 1658
Query: 432 P-----IPISIPAGASLTPVSLQHVQLVPCMCPVAP 524
P P P+ S +P S ++ P P +P
Sbjct: 1659 PSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSP 1694
>U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical
protein ZK813.5 protein.
Length = 471
Score = 30.3 bits (65), Expect = 0.94
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +3
Query: 258 SDSAPPSSQKTWV-----QPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQ 422
SD +P SS T V + SP+ + + ++P S +Y+ P E +
Sbjct: 345 SDVSPASSVMTVVGGENGPRIKSEASPSYQLRPNWNPSPSVTSYESDPPSSVTQETNLPI 404
Query: 423 NMAPIPISIPAGASLTP 473
P P+S+PA A+ TP
Sbjct: 405 TSIP-PVSVPASANCTP 420
>U97009-3|AAC69031.1| 619|Caenorhabditis elegans Hypothetical
protein T19H12.6 protein.
Length = 619
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Frame = +3
Query: 192 MMSFLVILAIVASSDAFFLKWGSDSAPPS--SQKTW----VQPLSPNVSP-TIRYQYMYS 350
++ F+VILA+V AFFL S+ S S +T+ +Q +SP+ SP T R ++ S
Sbjct: 104 LVQFIVILALVLGLIAFFLTRSESSSTTSEYSTRTYQNFELQTISPSSSPLTFRRRFKTS 163
>U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform c protein.
Length = 484
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 261 DSAPPSSQKTWVQPLSPNVSP---TIRYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNM 428
D +P S T + + P+++P + + + P+ Q A Q+ P VP H+ +
Sbjct: 164 DLSPTSRDSTQFEQI-PSIAPEESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIV 222
Query: 429 APIPIS 446
P+PIS
Sbjct: 223 QPVPIS 228
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 261 DSAPPSSQKTWVQPLSPNVSP---TIRYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNM 428
D +P S T + + P+++P + + + P+ Q A Q+ P VP H+ +
Sbjct: 164 DLSPTSRDSTQFEQI-PSIAPEESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIV 222
Query: 429 APIPIS 446
P+PIS
Sbjct: 223 QPVPIS 228
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 261 DSAPPSSQKTWVQPLSPNVSP---TIRYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNM 428
D +P S T + + P+++P + + + P+ Q A Q+ P VP H+ +
Sbjct: 164 DLSPTSRDSTQFEQI-PSIAPEESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIV 222
Query: 429 APIPIS 446
P+PIS
Sbjct: 223 QPVPIS 228
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 261 DSAPPSSQKTWVQPLSPNVSP---TIRYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNM 428
D +P S T + + P+++P + + + P+ Q A Q+ P VP H+ +
Sbjct: 164 DLSPTSRDSTQFEQI-PSIAPEESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIV 222
Query: 429 APIPIS 446
P+PIS
Sbjct: 223 QPVPIS 228
>AF125463-1|AAD12861.2| 263|Caenorhabditis elegans Hypothetical
protein Y49F6C.6 protein.
Length = 263
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +3
Query: 258 SDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQ---YSQPEVP 413
++S P S QKT Q +PT+ QY+YS + Y P+ QP+ P
Sbjct: 60 NNSKPISLQKTKTQFFLNYSNPTVLLQYLYSTTTVPRPYPTTNPKLISLQQPKTP 114
>AF100305-4|AAC68916.2| 426|Caenorhabditis elegans Hypothetical
protein W04B5.3a protein.
Length = 426
Score = 28.7 bits (61), Expect = 2.9
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = +3
Query: 273 PSSQKTWVQPLSPNVSPTIRY----QYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAP-I 437
PS T P S N +P I Q ++ Q P Y+ Q MA +
Sbjct: 295 PSVPYTVTYPQSANSTPGIPQPLPQQMSRQQAPIYQNQQQMPPGYNPYLQQQQQQMAATV 354
Query: 438 PISIPAGASLTPVSLQHVQLVPCMCPVAP 524
P+ P+GA+ PVS Q+V V P
Sbjct: 355 PMPYPSGAAAVPVSAMAPQVVQYPTTVVP 383
>AF100305-3|AAL65795.1| 426|Caenorhabditis elegans Hypothetical
protein W04B5.3b protein.
Length = 426
Score = 28.7 bits (61), Expect = 2.9
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = +3
Query: 273 PSSQKTWVQPLSPNVSPTIRY----QYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAP-I 437
PS T P S N +P I Q ++ Q P Y+ Q MA +
Sbjct: 295 PSVPYTVTYPQSANSTPGIPQPLPQQMSRQQAPIYQNQQQMPPGYNPYLQQQQQQMAATV 354
Query: 438 PISIPAGASLTPVSLQHVQLVPCMCPVAP 524
P+ P+GA+ PVS Q+V V P
Sbjct: 355 PMPYPSGAAAVPVSAMAPQVVQYPTTVVP 383
>Z32683-10|CAA83625.1| 381|Caenorhabditis elegans Hypothetical
protein R07E5.3 protein.
Length = 381
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 360 SHKTYQLQAPQYSQPEVP-IHQNMAPIPISIPAGASLTPVSLQHVQLVPCMCPVA 521
S + Y+ S P + +A P + AG +T S H++ VPC CP+A
Sbjct: 94 SEEKYRAAGAAPSTPRTEGASRTVAKTPATGWAGQQVTSGS-HHLESVPCSCPIA 147
>AF038608-10|AAC25814.2| 327|Caenorhabditis elegans Serpentine
receptor, class z protein78 protein.
Length = 327
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 406 KFRSTKIWLLYLSVFLPERALPRYLCSTFNS 498
K + IW LYL F+ E AL C+T ++
Sbjct: 152 KLMAKHIWYLYLVCFIKELALAIIFCTTIST 182
>Z74032-2|CAA98466.2| 248|Caenorhabditis elegans Hypothetical
protein F35B12.3 protein.
Length = 248
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 383 STAILSARSSDPPKYGSYTYQYSCRSEPYP 472
S IL+A +YG+Y QYS +S+ YP
Sbjct: 10 SCGILAAAYPYSQQYGNYDQQYSQQSQYYP 39
>AF047660-1|AAC04431.1| 900|Caenorhabditis elegans Osm-9 and
capsaicin receptor-relatedprotein 2 protein.
Length = 900
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 414 IHQNMAPIPISIPAGASLTPVSLQHVQLVPCMCPVAPEE 530
IH+NMA +++ GASL V+ Q + + +A +E
Sbjct: 307 IHENMAMFKLALECGASLRTVNKQSLSPLTLAAKLAKKE 345
>AC024839-3|AAF60829.1| 308|Caenorhabditis elegans T box family
protein 30 protein.
Length = 308
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +3
Query: 300 PLSPNVSPTIRYQY---MYSPYESHKTYQLQAPQYSQPEVPIHQNMAP 434
P SP S +YQY YSP++S Y YS P Q+ +P
Sbjct: 249 PSSPLYSSQNQYQYPFHPYSPFDSSIPYPYSPMDYSYYFNPTFQSFSP 296
>AC024839-2|AAF60830.1| 308|Caenorhabditis elegans Hypothetical
protein Y59E9AR.5 protein.
Length = 308
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +3
Query: 300 PLSPNVSPTIRYQY---MYSPYESHKTYQLQAPQYSQPEVPIHQNMAP 434
P SP S +YQY YSP++S Y YS P Q+ +P
Sbjct: 249 PSSPLYSSQNQYQYPFHPYSPFDSSIPYPYSPMDYSYYFNPTFQSFSP 296
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 27.1 bits (57), Expect = 8.7
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Frame = +3
Query: 189 RMMSFLVILAIVASSDAFFLKWGSDSAPPSSQKTWVQPLSPN----VSPTIRYQYMYSPY 356
R++ F+V L + S + + P Q+T P+ N + RY++ P
Sbjct: 2 RLLLFIVALVPLVLSQYYMQQQMRPVMQPQQQRTMYYPVRTNCQNRCNQQTRYRWNVRPT 61
Query: 357 ESHKTYQLQ---APQYSQPEVPIHQNMAPIP-ISIPAGASLTPVS 479
Q+Q P P P+ P+P + P ++L P++
Sbjct: 62 NIRPNVQVQIRTIPSAPGPIRPVVNPAPPLPTLPTPPPSTLPPIT 106
>Z29094-15|CAA82341.3| 672|Caenorhabditis elegans Hypothetical
protein C07A9.11 protein.
Length = 672
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 360 SHKTYQLQAPQYSQPEVPIHQNMAPIP-ISIPAGA 461
S K+ AP PE+ +H AP P IS+ GA
Sbjct: 269 SRKSIHSVAPMPVIPEIEVHDQEAPFPEISVVTGA 303
>U97013-6|AAB52337.1| 221|Caenorhabditis elegans Hypothetical
protein F28H1.1 protein.
Length = 221
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 336 QYMYSPYES--HKTYQLQAPQYSQPEVPIHQNMA 431
QY + Y++ H+ YQ P Y QPE P+H A
Sbjct: 92 QYQQNQYQARQHQYYQNPPPFY-QPEQPVHYQSA 124
>AF106575-14|AAC78163.2| 365|Caenorhabditis elegans Serpentine
receptor, class w protein98 protein.
Length = 365
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 192 MMSFLVILAIVASSDAFFLKWGSDSAPPSS 281
+ F+ ++A + SS FF + G+D PP S
Sbjct: 79 LCDFVAMIATIVSSGMFFDEEGTDCTPPVS 108
>AF067942-6|AAG45579.1| 345|Caenorhabditis elegans Hypothetical
protein ZK6.4 protein.
Length = 345
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 255 GSDSAPPSSQKTWVQPLSPNVSPTIR 332
GSD PP+S + + +SPN+ IR
Sbjct: 205 GSDVLPPASSEWHISKISPNLENKIR 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,528,678
Number of Sequences: 27780
Number of extensions: 295980
Number of successful extensions: 929
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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