Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_E04
         (451 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.40 
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    23   3.8  
L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.       23   5.0  
L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.       23   5.0  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   6.6  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   6.6  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.6 bits (56), Expect = 0.40
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = -2

Query: 90  APVLSAQLITAPTGRPSE--MRNFAPAEP 10
           APV+ + ++TAP  RPS+     FAP EP
Sbjct: 91  APVVPSSVVTAPPARPSQPPTTRFAP-EP 118


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 256 SKWFPLPDHHC 224
           SKW+P   HHC
Sbjct: 98  SKWYPEIKHHC 108


>L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = +2

Query: 272 FIYFEDNAGCHREQQGGD--ERLGY 340
           F++ +DNA CH+  +  +  + LGY
Sbjct: 123 FLFHQDNAPCHKSVKTMEKIQELGY 147


>L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = +2

Query: 272 FIYFEDNAGCHREQQGGD--ERLGY 340
           F++ +DNA CH+  +  +  + LGY
Sbjct: 123 FLFHQDNAPCHKSVKTMEKIQELGY 147


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -1

Query: 250 WFPLPDHHC 224
           WFP  D HC
Sbjct: 154 WFPFDDQHC 162


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -1

Query: 250 WFPLPDHHC 224
           WFP  D HC
Sbjct: 154 WFPFDDQHC 162


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,993
Number of Sequences: 2352
Number of extensions: 11021
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)