Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_E04
(451 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3487|AAF46914.1| 140|Drosophila melanogaster CG3661-PA... 190 6e-49
M85295-1|AAA28867.1| 140|Drosophila melanogaster ribosomal prot... 176 1e-44
BT030159-1|ABN49298.1| 363|Drosophila melanogaster IP17715p pro... 31 0.71
AE013599-2351|AAF57949.1| 366|Drosophila melanogaster CG15615-P... 31 0.71
U43733-1|AAA86639.1| 904|Drosophila melanogaster Abrupt protein. 30 1.7
BT003807-1|AAO41490.1| 369|Drosophila melanogaster AT11330p pro... 30 1.7
BT001583-1|AAN71338.1| 894|Drosophila melanogaster RE25924p pro... 30 1.7
AE014134-2051|AAN10774.1| 894|Drosophila melanogaster CG4807-PB... 30 1.7
AE014134-2050|AAF53087.2| 904|Drosophila melanogaster CG4807-PA... 30 1.7
Z11527-1|CAA77616.1| 614|Drosophila melanogaster CYS3HIS finger... 29 2.2
BT021256-1|AAX33404.1| 608|Drosophila melanogaster RE58038p pro... 29 2.2
AE014297-3282|AAO41594.1| 599|Drosophila melanogaster CG4620-PB... 29 2.2
AE014297-3281|AAO41593.1| 599|Drosophila melanogaster CG4620-PA... 29 2.2
AY118357-1|AAM48386.1| 920|Drosophila melanogaster RE03056p pro... 29 2.9
AE013599-1937|AAM68547.1| 920|Drosophila melanogaster CG30480-P... 29 2.9
AY051587-1|AAK93011.1| 523|Drosophila melanogaster GH23377p pro... 28 6.7
AE014134-2961|AAF53691.1| 784|Drosophila melanogaster CG10383-P... 28 6.7
>AE013599-3487|AAF46914.1| 140|Drosophila melanogaster CG3661-PA
protein.
Length = 140
Score = 190 bits (464), Expect = 6e-49
Identities = 90/97 (92%), Positives = 93/97 (95%)
Frame = +2
Query: 8 GGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVK 187
GG+AG KFRISLGLPVGAV+NCADNTGAKNLYVIAV GI+GRLNRLPAAG GDM VATVK
Sbjct: 7 GGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVK 66
Query: 188 KGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
KGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG
Sbjct: 67 KGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 103
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 297 GVIVNNKGEMKGSAITGPVAKECADLWPR 383
GVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPR 131
>M85295-1|AAA28867.1| 140|Drosophila melanogaster ribosomal protein
L17A protein.
Length = 140
Score = 176 bits (428), Expect = 1e-44
Identities = 84/97 (86%), Positives = 87/97 (89%)
Frame = +2
Query: 8 GGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVK 187
GG+AG KFRISLGLPVGAV+NCADNTGAKNLYVIAV GI+GRLNRLPAAG GDM VATVK
Sbjct: 7 GGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVK 66
Query: 188 KGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
KGKPELRKKV RQRKPFRRRDGVFIYFEDNAG
Sbjct: 67 KGKPELRKKVSVVPSARQRKPFRRRDGVFIYFEDNAG 103
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 297 GVIVNNKGEMKGSAITGPVAKECADLWPR 383
GVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPR 131
>BT030159-1|ABN49298.1| 363|Drosophila melanogaster IP17715p
protein.
Length = 363
Score = 31.1 bits (67), Expect = 0.71
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 268 PVPPSKWFPLPDHHCWHY 215
PV S+WFP PDHH H+
Sbjct: 266 PVVISEWFPSPDHHDHHH 283
>AE013599-2351|AAF57949.1| 366|Drosophila melanogaster CG15615-PA
protein.
Length = 366
Score = 31.1 bits (67), Expect = 0.71
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 268 PVPPSKWFPLPDHHCWHY 215
PV S+WFP PDHH H+
Sbjct: 269 PVVISEWFPSPDHHDHHH 286
>U43733-1|AAA86639.1| 904|Drosophila melanogaster Abrupt protein.
Length = 904
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/59 (44%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 294 ALSSKYMNTPSRLLNG-FRCLITTAGITFFLSSGLPFLTVATIMSPEPAAGNLF-RRPL 124
A+ N P LL G F AG F SG P LT+ IM E AAGNL RPL
Sbjct: 785 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 842
>BT003807-1|AAO41490.1| 369|Drosophila melanogaster AT11330p
protein.
Length = 369
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/59 (44%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 294 ALSSKYMNTPSRLLNG-FRCLITTAGITFFLSSGLPFLTVATIMSPEPAAGNLF-RRPL 124
A+ N P LL G F AG F SG P LT+ IM E AAGNL RPL
Sbjct: 250 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 307
>BT001583-1|AAN71338.1| 894|Drosophila melanogaster RE25924p
protein.
Length = 894
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/59 (44%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 294 ALSSKYMNTPSRLLNG-FRCLITTAGITFFLSSGLPFLTVATIMSPEPAAGNLF-RRPL 124
A+ N P LL G F AG F SG P LT+ IM E AAGNL RPL
Sbjct: 775 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 832
>AE014134-2051|AAN10774.1| 894|Drosophila melanogaster CG4807-PB,
isoform B protein.
Length = 894
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/59 (44%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 294 ALSSKYMNTPSRLLNG-FRCLITTAGITFFLSSGLPFLTVATIMSPEPAAGNLF-RRPL 124
A+ N P LL G F AG F SG P LT+ IM E AAGNL RPL
Sbjct: 775 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 832
>AE014134-2050|AAF53087.2| 904|Drosophila melanogaster CG4807-PA,
isoform A protein.
Length = 904
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/59 (44%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 294 ALSSKYMNTPSRLLNG-FRCLITTAGITFFLSSGLPFLTVATIMSPEPAAGNLF-RRPL 124
A+ N P LL G F AG F SG P LT+ IM E AAGNL RPL
Sbjct: 785 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 842
>Z11527-1|CAA77616.1| 614|Drosophila melanogaster CYS3HIS finger
protein protein.
Length = 614
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +2
Query: 236 RQRKPFRRRDGVFIYFEDN-AGCHREQQG----GDERLGYHRT 349
R+R+P R+RDG F Y DN + E G GDE HRT
Sbjct: 72 RRRRPVRKRDGTFNYSADNYCTKYDETTGICPEGDECPYLHRT 114
>BT021256-1|AAX33404.1| 608|Drosophila melanogaster RE58038p
protein.
Length = 608
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +2
Query: 236 RQRKPFRRRDGVFIYFEDN-AGCHREQQG----GDERLGYHRT 349
R+R+P R+RDG F Y DN + E G GDE HRT
Sbjct: 66 RRRRPVRKRDGTFNYSADNYCTKYDETTGICPEGDECPYLHRT 108
>AE014297-3282|AAO41594.1| 599|Drosophila melanogaster CG4620-PB,
isoform B protein.
Length = 599
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +2
Query: 236 RQRKPFRRRDGVFIYFEDN-AGCHREQQG----GDERLGYHRT 349
R+R+P R+RDG F Y DN + E G GDE HRT
Sbjct: 57 RRRRPVRKRDGTFNYSADNYCTKYDETTGICPEGDECPYLHRT 99
>AE014297-3281|AAO41593.1| 599|Drosophila melanogaster CG4620-PA,
isoform A protein.
Length = 599
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +2
Query: 236 RQRKPFRRRDGVFIYFEDN-AGCHREQQG----GDERLGYHRT 349
R+R+P R+RDG F Y DN + E G GDE HRT
Sbjct: 57 RRRRPVRKRDGTFNYSADNYCTKYDETTGICPEGDECPYLHRT 99
>AY118357-1|AAM48386.1| 920|Drosophila melanogaster RE03056p
protein.
Length = 920
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 346 PVIAEPFISPLLFTMTPRIILEIYEHPVPPSKWFP 242
PV +P +SP+ + ++ E E P+PP+ + P
Sbjct: 205 PVAQQPPLSPIAEVVQTDVVAESVEPPLPPTGYIP 239
>AE013599-1937|AAM68547.1| 920|Drosophila melanogaster CG30480-PA
protein.
Length = 920
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 346 PVIAEPFISPLLFTMTPRIILEIYEHPVPPSKWFP 242
PV +P +SP+ + ++ E E P+PP+ + P
Sbjct: 205 PVAQQPPLSPIAEVVQTDVVAESVEPPLPPTGYIP 239
>AY051587-1|AAK93011.1| 523|Drosophila melanogaster GH23377p
protein.
Length = 523
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 91 KKSVCDCRTRYQGSSEQVTSCW 156
K SVC R Q +SE+ T+CW
Sbjct: 226 KFSVCGSEWRNQDTSEEYTNCW 247
>AE014134-2961|AAF53691.1| 784|Drosophila melanogaster CG10383-PA
protein.
Length = 784
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 91 KKSVCDCRTRYQGSSEQVTSCW 156
K SVC R Q +SE+ T+CW
Sbjct: 487 KFSVCGSEWRNQDTSEEYTNCW 508
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,501,462
Number of Sequences: 53049
Number of extensions: 528474
Number of successful extensions: 1855
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1855
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -