Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_E03
(568 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 272 1e-73
03_01_0034 + 318432-318825,318902-319851 270 7e-73
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 270 7e-73
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 270 7e-73
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 269 9e-73
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 269 9e-73
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 268 2e-72
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 264 4e-71
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 119 2e-27
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 118 3e-27
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 118 4e-27
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 116 1e-26
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 49 3e-06
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 29 2.6
02_05_0453 + 29132041-29132293,29133309-29133388,29133622-291337... 29 2.6
02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622 29 3.4
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 28 4.5
11_01_0595 + 4732330-4732723,4732839-4732903,4733023-4733143,473... 28 6.0
08_02_0787 - 21200762-21201142 28 6.0
08_01_0469 - 4127950-4127988,4127989-4128264,4128845-4130861,413... 28 6.0
06_01_0370 - 2660569-2661591,2661685-2662260 28 6.0
04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280 28 6.0
12_02_0352 - 17862577-17863528,17864076-17864827 27 7.9
07_03_1539 + 27567397-27568985,27569153-27569279,27569361-27569837 27 7.9
01_05_0465 + 22485728-22485835,22486125-22486955 27 7.9
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 272 bits (667), Expect = 1e-73
Identities = 121/138 (87%), Positives = 134/138 (97%)
Frame = +3
Query: 18 ELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPN 197
ELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPN
Sbjct: 288 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPN 347
Query: 198 NVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEME 377
NVK++VCDIPPRGLKMAATF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEME
Sbjct: 348 NVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 407
Query: 378 FTEAESNMNDLVSEYQQY 431
FTEAESNMNDLV+EYQQY
Sbjct: 408 FTEAESNMNDLVAEYQQY 425
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 270 bits (661), Expect = 7e-73
Identities = 121/138 (87%), Positives = 132/138 (95%)
Frame = +3
Query: 18 ELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPN 197
ELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPN
Sbjct: 288 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPN 347
Query: 198 NVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEME 377
NVK+ VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEME
Sbjct: 348 NVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 407
Query: 378 FTEAESNMNDLVSEYQQY 431
FTEAESNMNDLVSEYQQY
Sbjct: 408 FTEAESNMNDLVSEYQQY 425
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 270 bits (661), Expect = 7e-73
Identities = 120/138 (86%), Positives = 133/138 (96%)
Frame = +3
Query: 18 ELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPN 197
ELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPN
Sbjct: 309 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPN 368
Query: 198 NVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEME 377
NVK++VCDIPPRGL MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEME
Sbjct: 369 NVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 428
Query: 378 FTEAESNMNDLVSEYQQY 431
FTEAESNMNDLVSEYQQY
Sbjct: 429 FTEAESNMNDLVSEYQQY 446
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 270 bits (661), Expect = 7e-73
Identities = 120/138 (86%), Positives = 133/138 (96%)
Frame = +3
Query: 18 ELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPN 197
ELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPN
Sbjct: 288 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPN 347
Query: 198 NVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEME 377
NVK++VCDIPPRGL MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEME
Sbjct: 348 NVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 407
Query: 378 FTEAESNMNDLVSEYQQY 431
FTEAESNMNDLVSEYQQY
Sbjct: 408 FTEAESNMNDLVSEYQQY 425
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 269 bits (660), Expect = 9e-73
Identities = 119/138 (86%), Positives = 133/138 (96%)
Frame = +3
Query: 18 ELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPN 197
ELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPN
Sbjct: 468 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPN 527
Query: 198 NVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEME 377
NVK++VCDIPPRGL MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEME
Sbjct: 528 NVKSSVCDIPPRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 587
Query: 378 FTEAESNMNDLVSEYQQY 431
FTEAESNMNDLVSEYQQY
Sbjct: 588 FTEAESNMNDLVSEYQQY 605
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 269 bits (660), Expect = 9e-73
Identities = 120/138 (86%), Positives = 133/138 (96%)
Frame = +3
Query: 18 ELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPN 197
ELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPN
Sbjct: 288 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPN 347
Query: 198 NVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEME 377
NVK++VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEME
Sbjct: 348 NVKSSVCDIPPNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 407
Query: 378 FTEAESNMNDLVSEYQQY 431
FTEAESNMNDLV+EYQQY
Sbjct: 408 FTEAESNMNDLVAEYQQY 425
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 268 bits (657), Expect = 2e-72
Identities = 120/138 (86%), Positives = 133/138 (96%)
Frame = +3
Query: 18 ELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPN 197
ELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPN
Sbjct: 288 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPN 347
Query: 198 NVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEME 377
NVK++VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEME
Sbjct: 348 NVKSSVCDIPPIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 407
Query: 378 FTEAESNMNDLVSEYQQY 431
FTEAESNMNDLV+EYQQY
Sbjct: 408 FTEAESNMNDLVAEYQQY 425
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 264 bits (646), Expect = 4e-71
Identities = 117/138 (84%), Positives = 131/138 (94%)
Frame = +3
Query: 18 ELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPN 197
ELTQQM+DAKNMM A DPRHGRYLT +A+FRGRMS KEVDEQM+N+QNKNSSYFVEWIPN
Sbjct: 304 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPN 363
Query: 198 NVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEME 377
NVK++VCDIPP GL MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYT EGMDEME
Sbjct: 364 NVKSSVCDIPPVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEME 423
Query: 378 FTEAESNMNDLVSEYQQY 431
FTEAESNMNDLV+EYQQY
Sbjct: 424 FTEAESNMNDLVAEYQQY 441
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 119 bits (286), Expect = 2e-27
Identities = 54/146 (36%), Positives = 86/146 (58%), Gaps = 8/146 (5%)
Frame = +3
Query: 15 AELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIP 194
AE+T F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P
Sbjct: 289 AEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 348
Query: 195 NNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 350
K + PP ++ A I NST++ E+F RI +F M+ ++AF+HWY
Sbjct: 349 TGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWY 408
Query: 351 TGEGMDEMEFTEAESNMNDLVSEYQQ 428
GEGM+E EF+EA ++ L +Y++
Sbjct: 409 VGEGMEEGEFSEAREDLAALEKDYEE 434
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 118 bits (284), Expect = 3e-27
Identities = 53/145 (36%), Positives = 86/145 (59%), Gaps = 8/145 (5%)
Frame = +3
Query: 18 ELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPN 197
E+T +F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P
Sbjct: 290 EITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPT 349
Query: 198 NVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 353
K + PP ++ A I N+TA+ E+F RI +F M+ ++AF+HWY
Sbjct: 350 GFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYV 409
Query: 354 GEGMDEMEFTEAESNMNDLVSEYQQ 428
GEGM+E EF+EA ++ L +Y++
Sbjct: 410 GEGMEEGEFSEAREDLAALEKDYEE 434
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 118 bits (283), Expect = 4e-27
Identities = 54/146 (36%), Positives = 86/146 (58%), Gaps = 8/146 (5%)
Frame = +3
Query: 15 AELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIP 194
AE+T F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P
Sbjct: 289 AEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 348
Query: 195 NNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 350
K + PP ++ A I NST++ E+F RI +F M+ ++AF+HWY
Sbjct: 349 TGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWY 408
Query: 351 TGEGMDEMEFTEAESNMNDLVSEYQQ 428
GEGM+E EF+EA ++ L +Y++
Sbjct: 409 VGEGMEEGEFSEAREDLAALEKDYEE 434
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 116 bits (279), Expect = 1e-26
Identities = 51/145 (35%), Positives = 87/145 (60%), Gaps = 8/145 (5%)
Frame = +3
Query: 18 ELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPN 197
E+T +F+ ++MA CDPRHG+Y+ ++RG + K+V+ + +I+ + + FV+W P
Sbjct: 371 EITNSVFEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPT 430
Query: 198 NVKTAVCDIPPRGL--------KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 353
K + PP + + A I N+TA+ E+F RI +F M+ ++AF+HWY
Sbjct: 431 GFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYV 490
Query: 354 GEGMDEMEFTEAESNMNDLVSEYQQ 428
GEGM+E EF+EA ++ L +Y++
Sbjct: 491 GEGMEEGEFSEAREDLAALEKDYEE 515
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 48.8 bits (111), Expect = 3e-06
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 9/145 (6%)
Frame = +3
Query: 18 ELTQQMFDAKNMMAACDPRH-----GRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFV 182
++ +++ KN+M + R+ +Y+++ I +G + +V E + I+ + F+
Sbjct: 292 DVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFI 351
Query: 183 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG-- 356
EW P +++ + GL +A N T+I+ LF + Q+ + +++AFL Y
Sbjct: 352 EWGPASIQVS-------GLMLA-----NHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFP 399
Query: 357 --EGMDEMEFTEAESNMNDLVSEYQ 425
E D EF E+ + LV EY+
Sbjct: 400 MFEDNDLSEFDESREIIESLVDEYK 424
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 371 LVH-ALAGVPVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHG 210
LVH ALA + A+ + +RDAL L + + GRR +AG A G
Sbjct: 96 LVHRALAAAGASDVAAASRACRAWRDALRPLREAAALHARGRRVKHAAGAAAAAG 150
>02_05_0453 +
29132041-29132293,29133309-29133388,29133622-29133740,
29134131-29134191
Length = 170
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = -3
Query: 407 IVHVALRLRELHLVHALAGVPVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAG 228
+VH A LHLVHA++ V L E S EL D + L V + R AG
Sbjct: 67 LVHFARMADTLHLVHAVSS--VNNDLVYEKSQELMEDLAIEALKTSLVRTKARIVEGDAG 124
Query: 227 R 225
+
Sbjct: 125 K 125
>02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622
Length = 501
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 415 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 293
E RS LL A N + +P+ + + LN++ N S+MR
Sbjct: 328 EMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMR 368
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 394 LSASVNSISSMPSPVYQCKKALRLNIAVN 308
L+AS N+IS +P + C K RLN+ N
Sbjct: 142 LNASNNTISVLPDELAGCSKLFRLNLEGN 170
>11_01_0595 +
4732330-4732723,4732839-4732903,4733023-4733143,
4733596-4733687,4733850-4733915,4734106-4734125,
4734147-4734239,4734358-4734445,4734570-4734635,
4734728-4734843,4735410-4735500,4736133-4736234,
4736342-4736425,4736551-4736643,4736728-4736823,
4736914-4736999,4737528-4737606,4737675-4737788,
4737890-4737985,4738060-4738123,4738221-4738510,
4738901-4738956,4739060-4739177,4739287-4739367,
4739683-4739762,4740001-4740055,4740142-4740211,
4740279-4740468,4740567-4740690,4741055-4741129,
4741217-4741390
Length = 1112
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 245 HLQSAGRDV-AHGGLHVVRDPFHEVRRV 165
H + G +V A GGLHV+ HE RR+
Sbjct: 742 HCSTEGAEVKALGGLHVIGTSLHESRRI 769
>08_02_0787 - 21200762-21201142
Length = 126
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 119 HTTTEDGCDGEVTAVTRVTRRHHVLSVE 36
H E G DGE AVTR+ RR V + E
Sbjct: 99 HQVVEVGDDGEGAAVTRLRRRRMVRTCE 126
>08_01_0469 -
4127950-4127988,4127989-4128264,4128845-4130861,
4131134-4131987
Length = 1061
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +3
Query: 117 MSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM---AATFIGNSTAIQEL 287
++MKE+DE++ + +++ Y ++ I N + PR L M A +G + EL
Sbjct: 120 VAMKEIDEKLQEVATRHARYTIDNIAIN-PAGPATVDPRLLSMYKTLAELVGIEGPMDEL 178
Query: 288 FKRI 299
K +
Sbjct: 179 MKML 182
>06_01_0370 - 2660569-2661591,2661685-2662260
Length = 532
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +3
Query: 6 RPRAELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFV 182
RP AEL + +A ++A+C R Y V A GR++ ++ ++Q+K SY +
Sbjct: 72 RPLAELGDTLREAHELVASCQGRSAAYRFVMA---GRLA-----DRFRDVQSKIDSYLI 122
>04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280
Length = 434
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 415 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 293
E RS LL A N + +PS + + LN++ N S+++
Sbjct: 264 EMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLK 304
>12_02_0352 - 17862577-17863528,17864076-17864827
Length = 567
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 338 ESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRD 189
E ++S GE + +L+ GG D+G R ++AH + V D
Sbjct: 4 EMISSAVVGETLNRVVSRLVSGGSHNDDGMRGNSMERLEMAHSRMEAVLD 53
>07_03_1539 + 27567397-27568985,27569153-27569279,27569361-27569837
Length = 730
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 186 WIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRR 329
WI N VK + D+P G K+ FI +++ Q+ A ++R
Sbjct: 568 WITNKVKESWSDVPLHGNKI-EWFINQGDMVKKAIASFPFQYQANYKR 614
>01_05_0465 + 22485728-22485835,22486125-22486955
Length = 312
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 168 SSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQEL 287
++YF++ P N DIPP + +I + ++ EL
Sbjct: 99 ATYFIQHRPKNTAADFPDIPPAARESLDAYIAQAVSLAEL 138
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,829,488
Number of Sequences: 37544
Number of extensions: 236251
Number of successful extensions: 866
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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