Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_E02
(534 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 83 8e-16
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 83 8e-16
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 83 8e-16
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 83 8e-16
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 83 8e-16
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 83 8e-16
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 83 8e-16
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 83 8e-16
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 83 8e-16
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 82 1e-15
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 77 3e-14
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 82.6 bits (195), Expect = 8e-16
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = +3
Query: 9 RRLVRVGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 140
RRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 18 RRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKS 61
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 82.6 bits (195), Expect = 8e-16
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = +3
Query: 9 RRLVRVGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 140
RRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 79 RRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKS 122
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 82.6 bits (195), Expect = 8e-16
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = +3
Query: 9 RRLVRVGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 140
RRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 79 RRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKS 122
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 82.6 bits (195), Expect = 8e-16
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = +3
Query: 9 RRLVRVGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 140
RRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 79 RRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKS 122
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 82.6 bits (195), Expect = 8e-16
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = +3
Query: 9 RRLVRVGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 140
RRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 79 RRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKS 122
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 82.6 bits (195), Expect = 8e-16
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = +3
Query: 9 RRLVRVGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 140
RRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 79 RRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKS 122
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 82.6 bits (195), Expect = 8e-16
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = +3
Query: 9 RRLVRVGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 140
RRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 79 RRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKS 122
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 82.6 bits (195), Expect = 8e-16
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = +3
Query: 9 RRLVRVGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 140
RRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 79 RRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKS 122
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 82.6 bits (195), Expect = 8e-16
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = +3
Query: 9 RRLVRVGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 140
RRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 79 RRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKS 122
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 81.8 bits (193), Expect = 1e-15
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = +3
Query: 9 RRLVRVGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 140
RRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 79 RRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKS 122
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 77.4 bits (182), Expect = 3e-14
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = +3
Query: 12 RLVRVGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 140
RLV +GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 80 RLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKS 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,348,801
Number of Sequences: 237096
Number of extensions: 1417991
Number of successful extensions: 3039
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3039
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -