Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_E01
(611 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U11313-1|AAB41286.1| 547|Homo sapiens sterol carrier protein-X/... 162 1e-39
M75883-1|AAA03557.1| 547|Homo sapiens sterol carrier protein-X/... 162 1e-39
AL445183-3|CAH72590.1| 547|Homo sapiens sterol carrier protein ... 162 1e-39
AB208789-1|BAD92026.1| 406|Homo sapiens sterol carrier protein ... 162 1e-39
BC067108-1|AAH67108.1| 322|Homo sapiens sterol carrier protein ... 70 3e-15
X65140-1|CAA46270.1| 424|Homo sapiens peroxisomal 3-oxoacyl-CoA... 32 1.8
X51460-1|CAA35825.1| 326|Homo sapiens 3-oxoacyl-CoA thiolase pr... 32 1.8
X14813-1|CAA32918.1| 424|Homo sapiens protein ( Human liver mRN... 32 1.8
X12966-1|CAA31412.1| 424|Homo sapiens protein ( Human mRNA for ... 32 1.8
BC011977-1|AAH11977.1| 424|Homo sapiens acetyl-Coenzyme A acylt... 32 1.8
BC000635-1|AAH00635.1| 424|Homo sapiens acetyl-Coenzyme A acylt... 32 1.8
BC109230-1|AAI09231.1| 402|Homo sapiens LIM homeobox 5 protein. 31 3.2
AF291181-1|AAG36963.1| 402|Homo sapiens LHX5 protein protein. 31 3.2
>U11313-1|AAB41286.1| 547|Homo sapiens sterol carrier
protein-X/sterol carrier protein-2 protein.
Length = 547
Score = 162 bits (393), Expect = 1e-39
Identities = 79/127 (62%), Positives = 97/127 (76%), Gaps = 3/127 (2%)
Frame = +3
Query: 240 RKVFVVGVGMTNFIKPSTGG--DYPELGKEAVLAALADARIKYDDIQQAVCGYVFGDSTC 413
R+VFVVGVGMT F+KP DYP+L +EA ALADA+I Y + QA GYVFGDSTC
Sbjct: 12 RRVFVVGVGMTKFVKPGAENSRDYPDLAEEAGKKALADAQIPYSAVDQACVGYVFGDSTC 71
Query: 414 GQRVLYQ-VGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGICDVALAVGFEKMSPGALAS 590
GQR +Y +GMTGIPI NVNNNC+TGS ALF+++QLI+GG+ + LA+GFEKMS G+L
Sbjct: 72 GQRAIYHSLGMTGIPIINVNNNCATGSTALFMARQLIQGGVAECVLALGFEKMSKGSLGI 131
Query: 591 GFVNDRT 611
F +DRT
Sbjct: 132 KF-SDRT 137
>M75883-1|AAA03557.1| 547|Homo sapiens sterol carrier
protein-X/sterol carrier protein-2 protein.
Length = 547
Score = 162 bits (393), Expect = 1e-39
Identities = 79/127 (62%), Positives = 97/127 (76%), Gaps = 3/127 (2%)
Frame = +3
Query: 240 RKVFVVGVGMTNFIKPSTGG--DYPELGKEAVLAALADARIKYDDIQQAVCGYVFGDSTC 413
R+VFVVGVGMT F+KP DYP+L +EA ALADA+I Y + QA GYVFGDSTC
Sbjct: 12 RRVFVVGVGMTKFVKPGAENSRDYPDLAEEAGKKALADAQIPYSAVDQACVGYVFGDSTC 71
Query: 414 GQRVLYQ-VGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGICDVALAVGFEKMSPGALAS 590
GQR +Y +GMTGIPI NVNNNC+TGS ALF+++QLI+GG+ + LA+GFEKMS G+L
Sbjct: 72 GQRAIYHSLGMTGIPIINVNNNCATGSTALFMARQLIQGGVAECVLALGFEKMSKGSLGI 131
Query: 591 GFVNDRT 611
F +DRT
Sbjct: 132 KF-SDRT 137
>AL445183-3|CAH72590.1| 547|Homo sapiens sterol carrier protein 2
protein.
Length = 547
Score = 162 bits (393), Expect = 1e-39
Identities = 79/127 (62%), Positives = 97/127 (76%), Gaps = 3/127 (2%)
Frame = +3
Query: 240 RKVFVVGVGMTNFIKPSTGG--DYPELGKEAVLAALADARIKYDDIQQAVCGYVFGDSTC 413
R+VFVVGVGMT F+KP DYP+L +EA ALADA+I Y + QA GYVFGDSTC
Sbjct: 12 RRVFVVGVGMTKFVKPGAENSRDYPDLAEEAGKKALADAQIPYSAVDQACVGYVFGDSTC 71
Query: 414 GQRVLYQ-VGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGICDVALAVGFEKMSPGALAS 590
GQR +Y +GMTGIPI NVNNNC+TGS ALF+++QLI+GG+ + LA+GFEKMS G+L
Sbjct: 72 GQRAIYHSLGMTGIPIINVNNNCATGSTALFMARQLIQGGVAECVLALGFEKMSKGSLGI 131
Query: 591 GFVNDRT 611
F +DRT
Sbjct: 132 KF-SDRT 137
>AB208789-1|BAD92026.1| 406|Homo sapiens sterol carrier protein X
isoform 1 proprotein variant protein.
Length = 406
Score = 162 bits (393), Expect = 1e-39
Identities = 79/127 (62%), Positives = 97/127 (76%), Gaps = 3/127 (2%)
Frame = +3
Query: 240 RKVFVVGVGMTNFIKPSTGG--DYPELGKEAVLAALADARIKYDDIQQAVCGYVFGDSTC 413
R+VFVVGVGMT F+KP DYP+L +EA ALADA+I Y + QA GYVFGDSTC
Sbjct: 52 RRVFVVGVGMTKFVKPGAENSRDYPDLAEEAGKKALADAQIPYSAVDQACVGYVFGDSTC 111
Query: 414 GQRVLYQ-VGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGICDVALAVGFEKMSPGALAS 590
GQR +Y +GMTGIPI NVNNNC+TGS ALF+++QLI+GG+ + LA+GFEKMS G+L
Sbjct: 112 GQRAIYHSLGMTGIPIINVNNNCATGSTALFMARQLIQGGVAECVLALGFEKMSKGSLGI 171
Query: 591 GFVNDRT 611
F +DRT
Sbjct: 172 KF-SDRT 177
>BC067108-1|AAH67108.1| 322|Homo sapiens sterol carrier protein 2
protein.
Length = 322
Score = 69.7 bits (163), Expect(2) = 3e-15
Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Frame = +3
Query: 240 RKVFVVGVGMTNFIKPSTGG--DYPELGKEAVLAALADARIKYDDIQQAVCGYVFGDSTC 413
R+VFVVGVGMT F+KP DYP+L +EA ALADA+I Y + QA GYVFG + C
Sbjct: 12 RRVFVVGVGMTKFVKPGAENSRDYPDLAEEAGKKALADAQIPYSAVDQACVGYVFGVAEC 71
Score = 31.5 bits (68), Expect(2) = 3e-15
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 528 GICDVALAVGFEKMSPGALASGFVNDRT 611
G+ + LA+GFEKMS G+L F +DRT
Sbjct: 67 GVAECVLALGFEKMSKGSLGIKF-SDRT 93
>X65140-1|CAA46270.1| 424|Homo sapiens peroxisomal 3-oxoacyl-CoA
thiolase protein.
Length = 424
Score = 31.9 bits (69), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 450 IPIYNVNNNCSTGSNALFLSKQLIEGGICDVALAVGFEKMS 572
+P+ VN CS+G A+ I G D+ +A G E MS
Sbjct: 114 VPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMS 154
>X51460-1|CAA35825.1| 326|Homo sapiens 3-oxoacyl-CoA thiolase
protein.
Length = 326
Score = 31.9 bits (69), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 450 IPIYNVNNNCSTGSNALFLSKQLIEGGICDVALAVGFEKMS 572
+P+ VN CS+G A+ I G D+ +A G E MS
Sbjct: 16 VPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMS 56
>X14813-1|CAA32918.1| 424|Homo sapiens protein ( Human liver mRNA
for 3-oxoacyl-CoA thiolase. ).
Length = 424
Score = 31.9 bits (69), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 450 IPIYNVNNNCSTGSNALFLSKQLIEGGICDVALAVGFEKMS 572
+P+ VN CS+G A+ I G D+ +A G E MS
Sbjct: 114 VPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMS 154
>X12966-1|CAA31412.1| 424|Homo sapiens protein ( Human mRNA for
3-oxoacyl-CoA peroxisomal thiolase. ).
Length = 424
Score = 31.9 bits (69), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 450 IPIYNVNNNCSTGSNALFLSKQLIEGGICDVALAVGFEKMS 572
+P+ VN CS+G A+ I G D+ +A G E MS
Sbjct: 114 VPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMS 154
>BC011977-1|AAH11977.1| 424|Homo sapiens acetyl-Coenzyme A
acyltransferase 1 (peroxisomal 3-oxoacyl-Coenzyme A
thiolase) protein.
Length = 424
Score = 31.9 bits (69), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 450 IPIYNVNNNCSTGSNALFLSKQLIEGGICDVALAVGFEKMS 572
+P+ VN CS+G A+ I G D+ +A G E MS
Sbjct: 114 VPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMS 154
>BC000635-1|AAH00635.1| 424|Homo sapiens acetyl-Coenzyme A
acyltransferase 1 (peroxisomal 3-oxoacyl-Coenzyme A
thiolase) protein.
Length = 424
Score = 31.9 bits (69), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 450 IPIYNVNNNCSTGSNALFLSKQLIEGGICDVALAVGFEKMS 572
+P+ VN CS+G A+ I G D+ +A G E MS
Sbjct: 114 VPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMS 154
>BC109230-1|AAI09231.1| 402|Homo sapiens LIM homeobox 5 protein.
Length = 402
Score = 31.1 bits (67), Expect = 3.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 464 CEQQLFDRFKRTVLI*TTHRRWHMRCSSCSRI*KNVSRR 580
CE+ + DRF VL R WH++C C N+S +
Sbjct: 8 CERPILDRFLLNVL----DRAWHIKCVQCCECKTNLSEK 42
>AF291181-1|AAG36963.1| 402|Homo sapiens LHX5 protein protein.
Length = 402
Score = 31.1 bits (67), Expect = 3.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 464 CEQQLFDRFKRTVLI*TTHRRWHMRCSSCSRI*KNVSRR 580
CE+ + DRF VL R WH++C C N+S +
Sbjct: 8 CERPILDRFLLNVL----DRAWHIKCVQCCECKTNLSEK 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,204,451
Number of Sequences: 237096
Number of extensions: 1899024
Number of successful extensions: 3668
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3657
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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