Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_D24
(541 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0031 + 19425011-19425113,19425552-19425637,19425732-194258... 258 3e-69
02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541... 232 2e-61
06_03_0179 - 17604561-17606435 46 3e-05
03_05_0628 - 26245714-26245755,26245854-26245938,26246022-262461... 41 5e-04
09_04_0483 + 17979566-17980019,17980242-17980321,17980431-179808... 41 7e-04
11_06_0325 + 22376195-22377001,22377136-22377525,22377638-223777... 40 0.001
11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680 40 0.001
09_04_0484 + 17990020-17990488,17990930-17991009,17991122-179915... 40 0.001
01_05_0703 - 24404580-24406373 40 0.001
07_01_1181 + 11203073-11203604,11204124-11204143 40 0.001
06_03_0710 + 23792138-23792293,23792974-23793257,23794344-237944... 40 0.001
04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141 40 0.002
03_04_0206 - 18493178-18495310 40 0.002
12_02_0038 - 12630564-12630580,12630789-12631260 38 0.004
03_01_0393 - 3062859-3062972,3063027-3063311,3063472-3063759,306... 38 0.004
02_02_0028 + 6196453-6196512,6196936-6197320,6197843-6197925,619... 38 0.004
06_03_0611 - 22721977-22722276,22722765-22722853,22722978-227230... 38 0.005
08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831 36 0.016
09_02_0068 - 3832858-3833228,3835773-3836223 36 0.021
09_01_0131 - 1966406-1966425,1967469-1967901 36 0.021
07_03_0293 + 16321539-16321893,16322020-16322207,16322881-163229... 36 0.021
03_02_0898 - 12246747-12246833,12247425-12247601,12248054-122481... 36 0.027
11_04_0014 - 12253341-12253358,12253520-12253729,12254388-122545... 35 0.036
09_03_0029 + 11724581-11724583,11726413-11726610,11726874-117270... 35 0.036
10_08_0489 + 18269824-18270270,18271659-18271948,18272341-182725... 35 0.048
08_02_1614 - 28243532-28244589,28245149-28245383,28245524-282457... 34 0.063
05_04_0148 - 18426903-18427106,18430516-18430594,18430752-184309... 34 0.063
05_03_0017 - 7392742-7393110,7393212-7393319,7393522-7394079,739... 34 0.063
05_01_0418 - 3288844-3288990,3289256-3289332,3289578-3289653,329... 34 0.063
04_04_0582 + 26369537-26369914,26371598-26371887,26371985-263721... 34 0.063
02_05_1169 + 34656450-34656603,34657321-34657481,34657907-346579... 34 0.063
12_01_0833 - 7730761-7731030,7731171-7731425,7731565-7731736,773... 34 0.083
01_06_0371 + 28819035-28819322,28820541-28820595,28821179-288213... 34 0.083
08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,304... 33 0.11
06_03_1249 - 28688997-28689248,28689469-28689533,28690016-286900... 33 0.11
01_06_0857 - 32507119-32507328,32507936-32508058,32508194-325082... 33 0.11
01_01_0134 - 1224084-1224269,1224578-1224662,1224763-1225050,122... 33 0.11
09_06_0365 - 22582467-22583524,22584407-22584641,22585474-225856... 33 0.15
08_02_0582 + 18993816-18993890,18994050-18994446,18995645-189957... 33 0.15
06_03_1508 - 30653967-30654245,30654342-30654631,30654773-306548... 33 0.15
05_01_0147 - 981697-983739 33 0.15
04_01_0490 - 6440176-6440448,6440785-6441074,6441156-6441304,644... 33 0.15
01_02_0042 - 10513799-10514152,10514252-10514545,10514630-105148... 33 0.15
11_06_0223 - 21419128-21419397,21419493-21419747,21420243-214204... 33 0.19
08_02_1616 + 28260204-28262555 33 0.19
07_03_0635 + 20151861-20152249,20152589-20152709,20154914-201549... 33 0.19
04_04_1232 - 31956286-31956463,31957822-31957880,31959343-319593... 33 0.19
01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,403... 33 0.19
09_04_0037 + 13992103-13992624,13993001-13993180,13993423-139936... 32 0.25
09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,995... 32 0.25
05_07_0003 + 26981956-26982190,26982258-26982318,26982739-269828... 32 0.25
02_02_0654 - 12662931-12663200,12663296-12663550,12664097-126642... 32 0.25
10_08_0352 + 17091637-17091945,17092049-17096617,17096975-170971... 32 0.34
09_02_0496 - 9892242-9892499,9892956-9893045,9893046-9893094,989... 32 0.34
08_02_0581 + 18986084-18986176,18986284-18986668,18986779-189868... 32 0.34
02_04_0067 - 19425019-19425288,19425393-19425647,19425766-194259... 32 0.34
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991... 31 0.44
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635... 31 0.44
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 31 0.44
08_01_0345 + 3055522-3055827,3055968-3056022,3056744-3056919,305... 31 0.44
07_01_0663 + 4975950-4977688,4978183-4978528 31 0.44
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606... 31 0.44
01_06_0556 + 30207124-30207581,30207692-30207901,30208016-302081... 31 0.44
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044... 31 0.44
01_05_0660 - 24071523-24071780,24071873-24072127,24072209-240723... 31 0.44
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621... 31 0.44
01_05_0658 - 24043655-24043945,24044003-24044257,24044359-240445... 31 0.44
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 31 0.44
10_08_0173 + 15414628-15414890,15415001-15415074,15416322-154164... 31 0.59
05_07_0004 + 26990250-26990516,26990877-26990931,26991286-269914... 31 0.78
01_06_1488 + 37716986-37717076,37717424-37717558,37717755-377178... 31 0.78
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026... 31 0.78
08_02_1615 + 28257275-28258428,28258523-28259144 30 1.0
04_03_0867 - 20414999-20415160,20415255-20415384,20415515-204157... 30 1.0
09_02_0434 + 9365038-9366150,9367352-9368680,9368906-9370012,937... 30 1.4
06_01_0102 + 834660-834911,835460-835568,835891-836006,836116-83... 30 1.4
03_06_0759 - 36059872-36059928,36059934-36060125,36060241-360603... 30 1.4
03_06_0128 - 31879286-31879381,31879463-31879574,31879680-318797... 30 1.4
10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136,713... 29 1.8
05_01_0271 + 2105122-2105470,2105557-2105954,2106035-2106273,210... 29 1.8
05_01_0055 - 390371-390457,390637-390715,390804-390856,390951-39... 29 1.8
04_04_0271 + 24069218-24069433,24069695-24070365,24070458-24073410 29 1.8
01_06_1760 - 39697079-39697162,39697280-39697340,39697415-396974... 29 1.8
01_06_1264 + 35854600-35856849 29 1.8
11_06_0150 - 20640535-20640600,20641299-20641451,20641567-20641830 29 2.4
09_02_0504 - 10013784-10014041,10014558-10014660,10014932-100150... 29 2.4
06_03_0437 - 20765682-20765951,20766040-20766294,20766374-207665... 29 2.4
05_01_0149 + 989698-991797 29 2.4
03_02_0582 + 9624481-9626844 29 3.1
03_06_0004 + 30936670-30936726,30936858-30936905,30937045-309370... 28 4.1
02_02_0682 - 12923103-12923747,12924607-12924870,12924953-129252... 28 4.1
02_02_0490 - 10879761-10879861,10879946-10880185,10880274-108803... 28 4.1
10_01_0133 + 1621574-1625779 28 5.5
05_04_0388 - 20841566-20841667,20841861-20842031 28 5.5
11_04_0359 + 16735204-16735676,16736597-16736647,16736860-167369... 27 7.2
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 7.2
08_02_0669 + 19868149-19870179 27 7.2
06_01_0144 + 1089090-1091390 27 7.2
03_02_0583 + 9635002-9637299 27 7.2
01_07_0299 + 42594363-42594424,42594516-42594798,42595185-425954... 27 7.2
01_06_0365 + 28767538-28767696,28768299-28768520,28768630-287688... 27 7.2
01_05_0215 + 19374279-19374327,19374629-19374633,19376902-193769... 27 7.2
11_02_0150 - 8816714-8817806,8817993-8818126 27 9.6
06_01_0602 - 4342333-4342790,4342899-4345623 27 9.6
05_06_0191 - 26265460-26267016,26267858-26268356,26268789-262688... 27 9.6
04_03_0989 - 21475147-21475361,21477029-21477074,21477364-21479292 27 9.6
04_03_0687 + 18713603-18713962,18715318-18715539,18717068-187172... 27 9.6
02_05_0385 - 28506326-28506891,28506993-28507405,28507496-285077... 27 9.6
02_02_0025 + 6183328-6186127,6186265-6186623 27 9.6
02_01_0672 - 4989053-4990432,4990523-4991410,4995896-4996436,499... 27 9.6
02_01_0670 - 4976658-4978037,4978128-4979015,4982590-4983130,498... 27 9.6
01_06_0555 - 30182818-30183169,30183268-30183674,30183804-301847... 27 9.6
01_05_0212 + 19347142-19347444,19348853-19348907,19349117-193492... 27 9.6
01_01_0517 + 3803740-3806106,3806226-3806312,3806397-3807035,380... 27 9.6
>11_06_0031 +
19425011-19425113,19425552-19425637,19425732-19425829,
19425950-19426067,19426200-19426289,19426770-19427074,
19427162-19427357,19427435-19427617,19427713-19427982,
19428906-19429151,19429633-19429704,19430087-19430104
Length = 594
Score = 258 bits (631), Expect = 3e-69
Identities = 112/140 (80%), Positives = 127/140 (90%)
Frame = +3
Query: 120 DKLTRIAIVNADRCKPKRCRQECKKSCPLVRMGKLCIEVTPNDKIATISEELCIGCGICV 299
++LTRIAIV+ D+CKPK+CRQECKKSCP+V+ GKLCIEVTP K+A ISEELCIGCGICV
Sbjct: 3 ERLTRIAIVSEDKCKPKKCRQECKKSCPVVKTGKLCIEVTPASKLAFISEELCIGCGICV 62
Query: 300 KKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGPNGIGKSTALKI 479
KKCPFDAI IIN+P +LEK TTHRY N+FKLHRLP+PRPG+VLGLVG NGIGKSTALK+
Sbjct: 63 KKCPFDAIEIINLPKDLEKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKV 122
Query: 480 LAGKQKPNLGRFADPPDWQE 539
LAGK KPNLGRF +PPDWQE
Sbjct: 123 LAGKLKPNLGRFKNPPDWQE 142
Score = 30.7 bits (66), Expect = 0.78
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 354 KHTTHRYSKNSFKLHRLPIP-RPGEVLGLVGPNGIGKSTALKILAGKQKPN 503
K+ T ++ +FKL + +++ ++G NG GK+T +++LAG KP+
Sbjct: 350 KYPTMSKTQGNFKLTVVEGEFTDSQIVVMLGENGTGKTTFIRMLAGLLKPD 400
>02_02_0464 -
10552347-10552466,10552683-10552928,10553866-10554135,
10554231-10554413,10554493-10554688,10554775-10555079,
10555515-10555604,10555689-10555806,10555991-10556088,
10556187-10556272,10557622-10557736
Length = 608
Score = 232 bits (567), Expect = 2e-61
Identities = 98/144 (68%), Positives = 120/144 (83%)
Frame = +3
Query: 108 NEETDKLTRIAIVNADRCKPKRCRQECKKSCPLVRMGKLCIEVTPNDKIATISEELCIGC 287
+ + + +RIA+V DRC+P +C Q+C+K CP+ G+ CIEVTP+ +++ ISEELCIGC
Sbjct: 3 SSSSGRSSRIAVVTEDRCRPSKCGQQCRKRCPVNATGRQCIEVTPSSRVSLISEELCIGC 62
Query: 288 GICVKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGPNGIGKST 467
GICVK CPFDAI IIN+PS+L+K TTHRY NSFKLHRLP+PRPG+VLGLVG NGIGKST
Sbjct: 63 GICVKVCPFDAIQIINLPSDLDKETTHRYGPNSFKLHRLPVPRPGQVLGLVGTNGIGKST 122
Query: 468 ALKILAGKQKPNLGRFADPPDWQE 539
ALKILAGK KPNLG+F DPP+W E
Sbjct: 123 ALKILAGKVKPNLGKFTDPPNWDE 146
Score = 32.3 bits (70), Expect = 0.25
Identities = 11/27 (40%), Positives = 22/27 (81%)
Frame = +3
Query: 423 EVLGLVGPNGIGKSTALKILAGKQKPN 503
+++ ++G NG GK+T +++LAG+ KP+
Sbjct: 378 QIIVMLGENGTGKTTFIRMLAGRVKPD 404
>06_03_0179 - 17604561-17606435
Length = 624
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
RPGE+L +VGP+G GKST L ILA + P GR
Sbjct: 87 RPGEILAVVGPSGAGKSTLLDILAARTAPTHGR 119
>03_05_0628 -
26245714-26245755,26245854-26245938,26246022-26246197,
26246325-26246432,26246713-26246788,26246878-26246939,
26247228-26247323,26247735-26247861,26247969-26248036
Length = 279
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQKPN 503
R GE +G++GP+G GKST LK++AG P+
Sbjct: 67 RHGEAVGIIGPSGTGKSTVLKVMAGLLAPD 96
>09_04_0483 +
17979566-17980019,17980242-17980321,17980431-17980895,
17981460-17981597,17982574-17982660,17982781-17982909,
17983034-17983225,17983393-17983479,17983707-17984378
Length = 767
Score = 40.7 bits (91), Expect = 7e-04
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQKPNLGRFAD 521
RPGEVL ++GP+G GKST L LAG+ ++ + D
Sbjct: 128 RPGEVLAIMGPSGCGKSTLLDALAGRLGSSVSQKGD 163
>11_06_0325 +
22376195-22377001,22377136-22377525,22377638-22377778,
22377888-22378067,22378268-22378447,22378536-22378637,
22378768-22378896,22379318-22379422,22379528-22379623
Length = 709
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLGRFADPPD 530
GE +GLVG NG GK+T L+I+AG + P+ G D
Sbjct: 116 GEKVGLVGVNGAGKTTQLRIIAGLEDPDAGAVVKAKD 152
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
GE + ++GPNG GKST LK++ G +K G
Sbjct: 459 GEKIAIIGPNGCGKSTLLKLILGMEKTQGG 488
>11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680
Length = 612
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGK 491
RPGEVL ++GP+G GKST L IL G+
Sbjct: 67 RPGEVLAVLGPSGSGKSTLLSILGGR 92
>09_04_0484 +
17990020-17990488,17990930-17991009,17991122-17991586,
17994670-17994756,17994887-17995018,17995102-17995293,
17995409-17995495,17995621-17996295
Length = 728
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQKPNLGRFAD 521
RPGEVL ++GP+G GKST L LAG+ ++ + D
Sbjct: 133 RPGEVLAIMGPSGCGKSTLLDSLAGRLGSSVSQKGD 168
>01_05_0703 - 24404580-24406373
Length = 597
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGKQKP 500
PGEV+ +VGP+G GK+T L +LAG P
Sbjct: 61 PGEVVAIVGPSGAGKTTLLSVLAGSADP 88
>07_01_1181 + 11203073-11203604,11204124-11204143
Length = 183
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGK 491
RPGEVL L+GP+G GK+T L LAG+
Sbjct: 154 RPGEVLALMGPSGCGKTTLLDALAGR 179
>06_03_0710 +
23792138-23792293,23792974-23793257,23794344-23794499,
23795318-23795804,23795864-23796181,23796773-23797165,
23797752-23798021
Length = 687
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGK 491
PGE+L L+GP+G GK+T LKIL G+
Sbjct: 100 PGEILALMGPSGSGKTTLLKILGGR 124
>04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141
Length = 606
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
G+ + +VGPNG GKST LK+LAG+ P G
Sbjct: 401 GQRVAVVGPNGAGKSTLLKLLAGELTPTSG 430
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKP 500
G GLVGPNG GK+T LK+L ++ P
Sbjct: 114 GRRYGLVGPNGKGKTTLLKLLHWRKLP 140
>03_04_0206 - 18493178-18495310
Length = 710
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/51 (45%), Positives = 28/51 (54%)
Frame = +3
Query: 348 LEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGPNGIGKSTALKILAGKQKP 500
LE + K K L I G GLVGPNG+GKST LK+L+ +Q P
Sbjct: 160 LENFSVSARGKELLKNASLRISH-GRRYGLVGPNGMGKSTLLKLLSWRQVP 209
Score = 35.9 bits (79), Expect = 0.021
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
G + +VGPNG GKST L +LAG P G
Sbjct: 510 GTRVAIVGPNGAGKSTLLNLLAGDLTPTKG 539
>12_02_0038 - 12630564-12630580,12630789-12631260
Length = 162
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAG 488
RPGEVL ++GP+G GK+T L LAG
Sbjct: 134 RPGEVLAIMGPSGCGKTTLLDTLAG 158
>03_01_0393 -
3062859-3062972,3063027-3063311,3063472-3063759,
3063844-3064161,3064232-3064415,3064504-3064659,
3066394-3066620,3066734-3066804,3067090-3067534
Length = 695
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGK 491
PGEVL L+GP+G GK+T L IL G+
Sbjct: 199 PGEVLALMGPSGSGKTTLLSILGGR 223
>02_02_0028 +
6196453-6196512,6196936-6197320,6197843-6197925,
6198060-6198183,6198404-6198523,6198595-6198755,
6198999-6199157,6199272-6199434,6199604-6199729,
6199775-6199900,6200400-6200764,6201204-6201404,
6201685-6201794,6201919-6202003,6202553-6202681,
6202763-6202868,6202984-6203072,6203172-6203474
Length = 964
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 402 LPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
L +PR G+ G++GPNG GK+T + +L G KP G
Sbjct: 667 LSMPR-GQCFGVLGPNGAGKTTLINMLTGFTKPTSG 701
>06_03_0611 -
22721977-22722276,22722765-22722853,22722978-22723083,
22723178-22723306,22723803-22723887,22723994-22724103,
22724424-22724624,22725033-22725394,22725612-22725695,
22725791-22725916,22725999-22726161,22726378-22726536,
22727147-22727274,22727371-22727493,22727755-22727899,
22727992-22728068,22728318-22728696,22729325-22729411
Length = 950
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 381 NSFKLHRLPIPRP-GEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
+ F + L + P GE LG++GPNG GKS+ + ++ G +P G
Sbjct: 645 DKFAVRGLSLALPYGECLGILGPNGAGKSSFISMMIGLTRPTSG 688
>08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831
Length = 757
Score = 36.3 bits (80), Expect = 0.016
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 408 IPRPGEVLGLVGPNGIGKSTALKILAGK 491
+ RPGE+L ++GP+G GK+T L L G+
Sbjct: 155 VVRPGEMLAMLGPSGSGKTTLLTALGGR 182
>09_02_0068 - 3832858-3833228,3835773-3836223
Length = 273
Score = 35.9 bits (79), Expect = 0.021
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILA 485
RPGEVL ++GP+G GK+T L LA
Sbjct: 127 RPGEVLAIMGPSGCGKTTLLDTLA 150
>09_01_0131 - 1966406-1966425,1967469-1967901
Length = 150
Score = 35.9 bits (79), Expect = 0.021
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILA 485
RPGEVL ++GP+G GK+T L LA
Sbjct: 121 RPGEVLAIMGPSGCGKTTLLDTLA 144
>07_03_0293 +
16321539-16321893,16322020-16322207,16322881-16322904,
16323497-16323550,16323854-16323944,16324715-16324815,
16324949-16324999,16326626-16326754,16327772-16327834,
16327928-16328171,16329628-16329776,16329855-16329944,
16330343-16330477,16330579-16330635,16331079-16331135,
16332299-16332336,16332532-16332601,16332971-16333207
Length = 710
Score = 35.9 bits (79), Expect = 0.021
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
G++ LVGP+G GKST +++LA +P GR
Sbjct: 458 GKITALVGPSGAGKSTVVQLLARYYEPTHGR 488
>03_02_0898 -
12246747-12246833,12247425-12247601,12248054-12248176,
12248545-12248766,12249556-12249606,12249712-12249987
Length = 311
Score = 35.5 bits (78), Expect = 0.027
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAG 488
R GE+ L+G NG GKST +K+LAG
Sbjct: 89 REGEIHALMGQNGSGKSTLMKVLAG 113
>11_04_0014 -
12253341-12253358,12253520-12253729,12254388-12254523,
12254631-12254752,12254789-12254842,12254872-12255161,
12255737-12255948,12256008-12256475,12256560-12256856,
12257467-12258329,12258417-12258490,12258616-12258650,
12259024-12259087,12259452-12259733,12259870-12259946,
12260045-12260325
Length = 1160
Score = 35.1 bits (77), Expect = 0.036
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGK 491
RPG V ++GP+G GK+T L +AGK
Sbjct: 482 RPGRVAAVMGPSGAGKTTFLSAIAGK 507
>09_03_0029 +
11724581-11724583,11726413-11726610,11726874-11727038,
11727217-11727283,11727645-11727812,11728070-11728194,
11728288-11728446,11728552-11728714,11728795-11728920,
11729000-11729083,11729161-11729528,11729613-11729813,
11729909-11730018,11730113-11730197,11730360-11730488,
11730580-11730667,11730805-11730893,11730968-11731267
Length = 875
Score = 35.1 bits (77), Expect = 0.036
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 402 LPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
L +P+ G+ G++GPNG GK++ + ++ G KP G
Sbjct: 585 LAVPK-GQCFGMLGPNGAGKTSFISMMIGLVKPTSG 619
>10_08_0489 +
18269824-18270270,18271659-18271948,18272341-18272512,
18272608-18272730,18272832-18272960,18273061-18273255,
18273384-18273470,18273563-18273835,18274047-18274154,
18274769-18275116
Length = 723
Score = 34.7 bits (76), Expect = 0.048
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGKQKPN 503
PG + L+GP+G GKST L LAG+ N
Sbjct: 100 PGTITALMGPSGSGKSTLLDALAGRLAAN 128
>08_02_1614 -
28243532-28244589,28245149-28245383,28245524-28245734,
28245834-28245907,28246465-28246665
Length = 592
Score = 34.3 bits (75), Expect = 0.063
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 429 LGLVGPNGIGKSTALKILAGKQKP 500
+ LVGPNG GKST LK++ G P
Sbjct: 406 IALVGPNGAGKSTLLKLMTGDLAP 429
>05_04_0148 -
18426903-18427106,18430516-18430594,18430752-18430935,
18431020-18431063,18432028-18432165,18432713-18434511
Length = 815
Score = 34.3 bits (75), Expect = 0.063
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = +3
Query: 423 EVLGLVGPNGIGKSTALKILAGK 491
++L +VGP+G GKST L+IL+G+
Sbjct: 96 QILAVVGPSGAGKSTLLRILSGR 118
>05_03_0017 -
7392742-7393110,7393212-7393319,7393522-7394079,
7394186-7394311,7394396-7394521,7394673-7395137,
7396822-7396901,7397394-7397664
Length = 700
Score = 34.3 bits (75), Expect = 0.063
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGKQKPNL 506
PG V+ ++GP+G GKST L L+G+ N+
Sbjct: 68 PGRVVAIMGPSGSGKSTLLDALSGRLARNV 97
>05_01_0418 -
3288844-3288990,3289256-3289332,3289578-3289653,
3290125-3290220,3290307-3290376,3290474-3290564,
3290753-3290822,3290908-3291044,3291313-3291465,
3291816-3291864,3292205-3292366
Length = 375
Score = 34.3 bits (75), Expect = 0.063
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Frame = +3
Query: 132 RIAIVNADRCKPKRCRQECKKSCPL--VRMGKLCIEVTPNDKIATISE-------ELCIG 284
R A + + C P C + C+K CP + + ++ IE + + + E C G
Sbjct: 119 RKAEFDPEDCPPD-CSKPCEKVCPADAILLERVMIEEEHSQSDPSCGKLEGGVITERCYG 177
Query: 285 CGICVKKCPFDAI 323
CG C+ CP+D I
Sbjct: 178 CGRCLSVCPYDRI 190
>04_04_0582 +
26369537-26369914,26371598-26371887,26371985-26372156,
26372271-26372393,26372499-26372627,26372785-26372979,
26373128-26373214,26373296-26373568,26374166-26374273,
26374363-26374686
Length = 692
Score = 34.3 bits (75), Expect = 0.063
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGKQKPN 503
PG + L+GP+G GKST L LAG+ N
Sbjct: 77 PGSLTALMGPSGSGKSTLLDALAGRLAAN 105
>02_05_1169 +
34656450-34656603,34657321-34657481,34657907-34657958,
34658289-34658425,34658775-34658861,34658939-34659226
Length = 292
Score = 34.3 bits (75), Expect = 0.063
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGK 491
PG L+G NG GK+T LKILAGK
Sbjct: 39 PGSRCLLIGANGSGKTTLLKILAGK 63
>12_01_0833 -
7730761-7731030,7731171-7731425,7731565-7731736,
7731873-7732106,7732362-7732495,7734116-7734199,
7735086-7735376,7735566-7735898,7736351-7736424,
7736558-7736653,7736876-7737029,7737118-7737221,
7737325-7737485,7737774-7738087,7738950-7739231,
7739909-7740210,7740513-7740713,7740924-7741014,
7741424-7741500,7741595-7741754,7742026-7742110,
7742194-7742288
Length = 1322
Score = 33.9 bits (74), Expect = 0.083
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +3
Query: 363 THRYSKNSFKLHRLPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNL 506
+H SK + I +P + L+GP G GK+T LK LAG+ +L
Sbjct: 12 SHHQSKVQILENVSGIIKPSRITLLLGPPGCGKTTLLKALAGRLNKSL 59
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
+PG + L+G G GK+T L +LAG++
Sbjct: 755 QPGILSALMGVTGAGKTTLLDVLAGRK 781
>01_06_0371 + 28819035-28819322,28820541-28820595,28821179-28821354,
28821481-28821702,28821796-28822034,28822107-28822632,
28822726-28822999,28823098-28823737,28823833-28824061,
28824299-28824565,28824700-28824963,28825045-28825689
Length = 1274
Score = 33.9 bits (74), Expect = 0.083
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 324 TIINIPSNLE-KHTTHRYSKNS----FKLHRLPIPRPGEVLGLVGPNGIGKSTALKILAG 488
T+ N+ N++ +H + +Y F L IP G+ + LVG +G GKSTA+ +L
Sbjct: 1023 TLANVKGNIDFRHVSFKYPTRPDVQIFSDFTLHIPS-GKTVALVGESGSGKSTAIALLER 1081
Query: 489 KQKPNLG 509
P G
Sbjct: 1082 FYNPESG 1088
>08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,
3045083-3045283,3045383-3045642,3045909-3046222,
3046399-3046622,3047046-3047398,3047709-3047826,
3047875-3048133,3048252-3049729
Length = 1245
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
PG+ + LVGP+G GKS+ L +L P GR
Sbjct: 1021 PGQRVALVGPSGAGKSSVLALLLRFYDPQRGR 1052
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 402 LPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
L IP G+V+ LVG +G GKST + +L P G
Sbjct: 402 LSIPA-GKVVALVGSSGCGKSTVISLLQRFYDPTSG 436
>06_03_1249 -
28688997-28689248,28689469-28689533,28690016-28690093,
28691480-28691824,28693314-28693510,28695601-28696601
Length = 645
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 402 LPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
L +PR G V+G++GP+G GKST L+ L +P G
Sbjct: 448 LDVPR-GVVVGVIGPSGSGKSTLLRALNRLWEPAPG 482
>01_06_0857 -
32507119-32507328,32507936-32508058,32508194-32508262,
32509963-32510238
Length = 225
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +3
Query: 402 LPIPRPGEVLGLVGPNGIGKSTALKIL 482
L +P PG++ L+GPNG GKST LK++
Sbjct: 69 LRVP-PGQLWMLLGPNGCGKSTLLKVV 94
>01_01_0134 -
1224084-1224269,1224578-1224662,1224763-1225050,
1225114-1225334,1225511-1225642,1226218-1226494,
1226722-1226770,1226993-1227088,1227779-1227911,
1228241-1228391,1228484-1228674,1229167-1229382
Length = 674
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGK 491
+ G +L L+GP+G GK+T L +LAG+
Sbjct: 85 KSGRLLALMGPSGSGKTTLLNVLAGQ 110
>09_06_0365 -
22582467-22583524,22584407-22584641,22585474-22585684,
22585775-22585848,22585943-22586092
Length = 575
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 429 LGLVGPNGIGKSTALKILAGKQKP 500
+ LVGPNG GKST LK++ G P
Sbjct: 389 VALVGPNGAGKSTLLKLMTGDLIP 412
>08_02_0582 +
18993816-18993890,18994050-18994446,18995645-18995748,
18995863-18996004,18996118-18996237,18996341-18996465,
18996903-18997061,18997161-18997323,18997420-18997545,
18997628-18997711,18997761-18998173,18998199-18998273,
18998463-18998663,18998862-18998971,18999072-18999156,
18999365-18999493,18999596-18999701,18999825-18999913,
19000064-19000366
Length = 1001
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
R G+ G++GPNG GK++ + ++ G P G
Sbjct: 707 RKGQCFGMLGPNGAGKTSFINMMIGLVAPTYG 738
>06_03_1508 -
30653967-30654245,30654342-30654631,30654773-30654841,
30654854-30654921,30655016-30655492,30655578-30655874,
30655974-30656824,30656917-30656990,30657270-30657292,
30657709-30657772,30658098-30658370,30658511-30658587,
30658686-30658912
Length = 1022
Score = 33.1 bits (72), Expect = 0.15
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGK 491
PG V ++GP+G GK+T L +AGK
Sbjct: 454 PGRVAAVMGPSGAGKTTFLSAIAGK 478
>05_01_0147 - 981697-983739
Length = 680
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGK 491
R GEVL ++G +G GKST L LAG+
Sbjct: 66 RDGEVLAVMGASGSGKSTLLDALAGR 91
>04_01_0490 -
6440176-6440448,6440785-6441074,6441156-6441304,
6441432-6441890,6441973-6442269,6442604-6443502,
6443793-6443827,6443984-6444078,6444184-6444247,
6446099-6446175,6446330-6446514
Length = 940
Score = 33.1 bits (72), Expect = 0.15
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGK 491
RPG V ++GP+G GK+T L + GK
Sbjct: 375 RPGRVTAVMGPSGAGKTTFLNAVTGK 400
>01_02_0042 - 10513799-10514152,10514252-10514545,10514630-10514893,
10515019-10515285,10515363-10516207,10516311-10516584,
10516694-10517219,10518009-10518247,10518370-10518591,
10518689-10518864,10518962-10519358
Length = 1285
Score = 33.1 bits (72), Expect = 0.15
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Frame = +3
Query: 321 ITIINIPSNLE-KHTTHRY-SKNSFKLHR---LPIPRPGEVLGLVGPNGIGKSTALKILA 485
+T+ + N+E +H + RY ++ ++ R L I G+ + LVG +G GKSTA+ +L
Sbjct: 1032 VTVETLHGNIEFQHVSFRYPTRPDVEIFRDLCLTI-HSGKTVALVGESGSGKSTAISLLQ 1090
Query: 486 GKQKPNLG 509
P++G
Sbjct: 1091 RFYDPDVG 1098
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 369 RYSKNSFKLHRLPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
R + F+ L IP G + LVG +G GKST + ++ P LG
Sbjct: 406 RPDEQIFRGFSLSIPS-GTTVALVGQSGSGKSTVISLIERFYDPQLG 451
>11_06_0223 -
21419128-21419397,21419493-21419747,21420243-21420414,
21420530-21420757,21420916-21421049,21421309-21421392,
21421554-21421760,21421871-21422203,21422343-21422449,
21422823-21422988,21423127-21423230,21423347-21423507,
21423595-21424495,21424642-21424732,21424837-21425127,
21425491-21425575,21425665-21425747,21427653-21427773,
21427785-21428260
Length = 1422
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RPG + LVG +G GK+T + +LAG++
Sbjct: 885 RPGVLTALVGVSGAGKTTLMDVLAGRK 911
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 408 IPRPGEVLGLVGPNGIGKSTALKILAGKQKPNL 506
I +P + L+GP GKST ++ L GK NL
Sbjct: 222 IIKPSRMTLLLGPPSSGKSTLMRALTGKLDKNL 254
>08_02_1616 + 28260204-28262555
Length = 783
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
R G L LVG +G GKS+ L ++ +PN GR
Sbjct: 549 RAGRTLALVGASGCGKSSVLALVQRFYEPNSGR 581
>07_03_0635 +
20151861-20152249,20152589-20152709,20154914-20154996,
20155819-20155903,20155987-20156277,20156555-20156645,
20157380-20158280,20158401-20158561,20158759-20158862,
20159040-20159205,20159283-20159378,20159694-20159800,
20160443-20160775,20161393-20161599,20161774-20161857,
20162887-20163020,20163166-20163393,20163541-20163712,
20164301-20164555,20164647-20164919
Length = 1426
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RPG + LVG +G GK+T + +LAG++
Sbjct: 888 RPGVLTALVGVSGAGKTTLMDVLAGRK 914
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +3
Query: 324 TIINIPSN-LEKHTTHRYSKNSFKLHRLP----IPRPGEVLGLVGPNGIGKSTALKILAG 488
T++N N LE + S N KL L I +P + L+GP GKST ++ L G
Sbjct: 160 TLLNATINTLEGLVSLFISSNKRKLKILNDVNGIIKPSRMTLLLGPPSSGKSTLMRALTG 219
Query: 489 KQKPNL 506
K NL
Sbjct: 220 KPDKNL 225
>04_04_1232 -
31956286-31956463,31957822-31957880,31959343-31959385,
31959599-31959679,31959779-31959890,31960764-31960824,
31961853-31962518
Length = 399
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 429 LGLVGPNGIGKSTALKILAGKQKPNLG 509
L L G NG GKST L++LAG +P+ G
Sbjct: 39 LVLTGANGSGKSTFLRMLAGFSRPSAG 65
>01_01_0548 -
4033077-4033349,4034007-4034261,4034362-4034533,
4034616-4034839,4035168-4035332,4035591-4035881,
4035971-4036303,4036391-4036485,4036570-4036689,
4036778-4036934,4037176-4037279,4037383-4037543,
4037636-4037952,4038655-4038936,4039020-4039321,
4039453-4039543,4040227-4040280,4040367-4040684,
4041008-4041092,4041178-4041266,4041474-4041594,
4042136-4042431
Length = 1434
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQKPNL 506
RPG + LVG +G GK+T + +LAG++ L
Sbjct: 887 RPGILTALVGVSGAGKTTLMDVLAGRKTGGL 917
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 408 IPRPGEVLGLVGPNGIGKSTALKILAGKQKPNL 506
I RP + L+GP GK+T L LAG+ P L
Sbjct: 164 IIRPSRMTLLLGPPSSGKTTLLLALAGRLGPGL 196
>09_04_0037 +
13992103-13992624,13993001-13993180,13993423-13993691,
13994120-13995773
Length = 874
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3
Query: 411 PRPGEVLGLVGPNGIGKSTALKILAGK 491
PR G+V ++GP+G GKST L LAG+
Sbjct: 133 PR-GQVTAILGPSGAGKSTFLDALAGR 158
>09_02_0501 -
9955987-9956244,9956329-9956583,9956713-9956884,
9957000-9957227,9959102-9959235,9959319-9959402,
9959539-9959829,9960076-9960405,9960526-9960668,
9960970-9961126,9961210-9961313,9961423-9961583,
9961664-9961980,9962094-9962375,9962471-9962772,
9962848-9962938,9963262-9963338,9963428-9963587,
9963682-9963766,9963838-9963949,9964864-9964943,
9968644-9968981
Length = 1386
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RPG + L+G +G GK+T L +LAG++
Sbjct: 825 RPGVLTALMGVSGAGKTTLLDVLAGRK 851
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 357 HTTHRYSKNSFKLHRLP-IPRPGEVLGLVGPNGIGKSTALKILAG 488
H T + + LH + I +P + L+GP G GK++ L LAG
Sbjct: 154 HITRKKKQKISILHNVSGIVKPHRMTLLLGPPGSGKTSLLMALAG 198
>05_07_0003 + 26981956-26982190,26982258-26982318,26982739-26982833,
26983304-26983479,26983738-26983959,26984041-26984279,
26984786-26985311,26985407-26985680,26985759-26986410,
26986508-26986736,26986841-26987107,26987180-26987443,
26987526-26988194
Length = 1302
Score = 32.3 bits (70), Expect = 0.25
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = +3
Query: 315 DAITIINIPSNLE-KHTTHRY-SKNSFKLHR---LPIPRPGEVLGLVGPNGIGKSTALKI 479
D + + N+ LE H Y S+ ++ R L IP G+++ LVG +G GKST + +
Sbjct: 1040 DGMVLANVAGELELHHVCFSYPSRPDIQIFRNLSLRIPS-GKMVALVGESGCGKSTVIAL 1098
Query: 480 LAGKQKPNLG 509
L P+ G
Sbjct: 1099 LERFYDPDSG 1108
>02_02_0654 -
12662931-12663200,12663296-12663550,12664097-12664268,
12664354-12664581,12664727-12664860,12665018-12665101,
12665332-12665538,12665641-12665973,12666175-12666281,
12666439-12666593,12666778-12666810,12666924-12666972,
12667152-12667312,12667413-12668313,12668391-12668481,
12668558-12668749
Length = 1123
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RPG + LVG +G GK+T + +LAG++
Sbjct: 586 RPGLLTALVGVSGAGKTTLMDVLAGRK 612
>10_08_0352 +
17091637-17091945,17092049-17096617,17096975-17097187,
17097266-17097494,17097857-17097981
Length = 1814
Score = 31.9 bits (69), Expect = 0.34
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 393 LHRLPIPRPGEVLGLVGPNGIGKSTALKILAGKQK 497
+ RL P G V+ + GP+GIGK+T K++ ++
Sbjct: 186 VRRLTQPDSGGVVAIYGPDGIGKTTLAKVVFDSER 220
>09_02_0496 -
9892242-9892499,9892956-9893045,9893046-9893094,
9893330-9893557,9894095-9894261,9894312-9894395,
9894614-9894820,9894919-9895251,9895371-9895513,
9895607-9895723,9895824-9895980,9896054-9896157,
9896272-9896432,9896518-9896707,9896732-9896834,
9896950-9897231,9897327-9897649,9897750-9897786,
9898109-9898162,9898292-9898368,9898449-9898502,
9898738-9898822,9900289-9900426,9900592-9900603
Length = 1150
Score = 31.9 bits (69), Expect = 0.34
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RPG + L+G +G GK+T L +LAG++
Sbjct: 702 RPGVLTALMGISGAGKTTLLDVLAGRK 728
>08_02_0581 +
18986084-18986176,18986284-18986668,18986779-18986861,
18986966-18987110,18987823-18987951,18988047-18988171,
18988261-18988419,18988503-18988665,18988750-18988875,
18989110-18989471,18989572-18989772,18989873-18989982,
18990079-18990163,18990298-18990426,18990505-18990610,
18990688-18990776,18990885-18991184
Length = 929
Score = 31.9 bits (69), Expect = 0.34
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 402 LPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
L +P+ G+ G++GPNG GK++ + ++ G P G
Sbjct: 633 LALPK-GQCFGMLGPNGAGKTSFISMMIGLIPPTSG 667
>02_04_0067 -
19425019-19425288,19425393-19425647,19425766-19425937,
19426069-19426302,19426523-19426656,19427663-19427746,
19428355-19428645,19428788-19429120,19429317-19429390,
19429464-19429644,19429993-19430096,19430232-19430392,
19430727-19431040,19431583-19431864,19432431-19432732,
19433176-19433266,19433368-19433421,19438917-19438993,
19439081-19439240,19439410-19439494,19439574-19440130
Length = 1404
Score = 31.9 bits (69), Expect = 0.34
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 408 IPRPGEVLGLVGPNGIGKSTALKILAGKQKPNL 506
I +P + L+GP G GK+T L LAGK NL
Sbjct: 181 ILKPSRLTLLLGPPGCGKTTLLLALAGKLDKNL 213
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
+PG + L+G G GK+T L +LAG++
Sbjct: 837 QPGVLSALMGVTGAGKTTLLDVLAGRK 863
>09_02_0499 -
9917891-9918148,9918240-9918494,9918769-9918940,
9919056-9919283,9919628-9919761,9919842-9919925,
9920007-9920297,9920569-9920901,9921029-9921171,
9921266-9921379,9921470-9921626,9921709-9921812,
9921914-9922074,9922158-9922474,9922574-9922855,
9923205-9923506,9923603-9923693,9923864-9923917,
9924052-9924128,9924213-9924372,9924473-9924557,
9924635-9924723,9925791-9925925
Length = 1341
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RPG + L+G +G GK+T + +LAG++
Sbjct: 780 RPGVLTALMGVSGAGKTTLMDVLAGRK 806
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 360 TTHRYSKNSFKLHRLP-IPRPGEVLGLVGPNGIGKSTALKILAG 488
T +R K S LH + I +P + L+GP G GK+T L LAG
Sbjct: 54 TPNRKQKISI-LHNVSGIIKPHRMTLLLGPPGAGKTTLLLALAG 96
>08_02_1457 +
27260841-27260965,27261126-27261246,27263455-27263543,
27263776-27263860,27263970-27264074,27264446-27264527,
27264573-27264686,27265029-27265330,27265519-27266114,
27266216-27266376,27266489-27266592,27266697-27266856,
27266942-27267105,27267213-27267545,27267640-27267930,
27268276-27268359,27268430-27268563,27268665-27268892,
27268993-27269164,27269263-27269517,27269778-27270047
Length = 1324
Score = 31.5 bits (68), Expect = 0.44
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RPG + L+G G GK+T L +LAG++
Sbjct: 759 RPGVLTALMGITGAGKTTLLDVLAGRK 785
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQKPNL 506
RP + L+G G GK+T LK LAGK +L
Sbjct: 109 RPSRMTLLLGAPGSGKTTLLKALAGKLDSSL 139
>08_02_0520 - 18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RPG + L+G +G GK+T + +LAG++
Sbjct: 927 RPGVLTALMGVSGAGKTTLMDVLAGRK 953
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGK 491
+P + L+GP G GK+T L LAGK
Sbjct: 226 KPRRMTLLLGPPGSGKTTLLLALAGK 251
>08_01_0345 + 3055522-3055827,3055968-3056022,3056744-3056919,
3057104-3057232,3057313-3057572,3057688-3058001,
3058268-3058491,3058862-3059214,3059489-3059916,
3060031-3061514
Length = 1242
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGKQKPNLGR-FADPPDWQE 539
PG+ + LVGP+G GKST + +L P G+ D D +E
Sbjct: 1016 PGQRVALVGPSGAGKSTIVSLLLRFYDPCRGQVLVDGKDVRE 1057
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 369 RYSKNSFKLHRLPIPRPGEVLGLVGPNGIGKSTALKIL 482
R K + L IP G+V+ LVG +G GKST + ++
Sbjct: 369 RVDKPILRSFSLSIPA-GKVVALVGSSGCGKSTVISLV 405
>07_01_0663 + 4975950-4977688,4978183-4978528
Length = 694
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
G V ++GP+G GKST L LAG+ LG
Sbjct: 63 GCVTAVMGPSGAGKSTLLDALAGRIAARLG 92
>02_02_0009 +
6068260-6068591,6068797-6068917,6069034-6069122,
6069207-6069291,6069421-6069580,6069667-6069743,
6069848-6069898,6069979-6070069,6070167-6070468,
6070549-6070830,6070911-6071388,6071457-6071560,
6071647-6071809,6071895-6072017,6072099-6072217,
6072304-6072636,6072713-6073003,6073088-6073171,
6073260-6073393,6073478-6073705,6073795-6073966,
6074062-6074316,6074408-6074668
Length = 1444
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RPG + L+G +G GK+T + +LAG++
Sbjct: 882 RPGVLTALMGVSGAGKTTLMDVLAGRK 908
Score = 30.7 bits (66), Expect = 0.78
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 408 IPRPGEVLGLVGPNGIGKSTALKILAGK 491
I RPG + L+GP G GK++ L LAGK
Sbjct: 176 IIRPGRMSLLLGPPGSGKTSLLLALAGK 203
>01_06_0556 +
30207124-30207581,30207692-30207901,30208016-30208100,
30208517-30208676,30208768-30208844,30208985-30209032,
30209504-30209594,30209703-30210004,30210214-30210495,
30210695-30211011,30211113-30211273,30211556-30211665,
30211752-30211902,30212438-30212578,30212688-30212857,
30213485-30213817,30213981-30214271,30214356-30214439,
30214620-30214753,30214946-30215173,30215273-30215444,
30215621-30215875,30215963-30216232
Length = 1509
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 408 IPRPGEVLGLVGPNGIGKSTALKILAGKQKPNL 506
I RP + L+GP GK+T L LAGK P L
Sbjct: 218 IVRPSRMTLLLGPPSSGKTTLLLALAGKLDPTL 250
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RPG + L+G +G GK+T + +L+G++
Sbjct: 944 RPGVLTALMGVSGAGKTTLMDVLSGRK 970
>01_05_0662 -
24103475-24103735,24103831-24104085,24104280-24104451,
24104535-24104762,24104864-24104997,24105101-24105184,
24105273-24105563,24105660-24105992,24106081-24106334,
24106435-24106591,24106674-24106777,24106879-24107039,
24107216-24107529,24107614-24107895,24107991-24108292,
24108367-24108457,24108566-24108619,24108785-24108861,
24108963-24109207,24109322-24109410,24110811-24111254
Length = 1443
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RPG + L+G +G GK+T + +LAG++
Sbjct: 881 RPGVLTALMGVSGAGKTTLMDVLAGRK 907
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 408 IPRPGEVLGLVGPNGIGKSTALKILAGKQKPNL 506
I +P + L+GP G GK+T L LAGK +L
Sbjct: 173 IIKPRRMTLLLGPPGSGKTTLLLALAGKLDKDL 205
>01_05_0660 -
24071523-24071780,24071873-24072127,24072209-24072380,
24072458-24072685,24072785-24072918,24073005-24073088,
24073231-24073521,24073599-24073931,24074016-24074266,
24074354-24074620,24074707-24074867,24074978-24075294,
24075386-24075667,24075753-24076054,24076147-24076237,
24076326-24076379,24076497-24076573,24076700-24076859,
24077129-24077213,24077421-24077630,24077736-24078097
Length = 1457
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RPG + L+G +G GK+T + +LAG++
Sbjct: 896 RPGVLTALMGVSGAGKTTLMDVLAGRK 922
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 408 IPRPGEVLGLVGPNGIGKSTALKILAGK 491
I +P + L+GP G GK+T L LAG+
Sbjct: 186 IIKPRRMTLLLGPPGSGKTTLLLALAGR 213
>01_05_0659 -
24061318-24061575,24061664-24061918,24062001-24062172,
24062258-24062381,24062442-24062485,24063601-24063734,
24063822-24063905,24064100-24064390,24064713-24065045,
24065145-24065389,24065644-24065910,24065997-24066157,
24066253-24066569,24066665-24066946,24067024-24067325,
24067398-24067488,24067796-24067849,24067963-24068039,
24068159-24068318,24068653-24068737,24069029-24069238,
24069344-24069732
Length = 1444
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RPG + L+G +G GK+T + +LAG++
Sbjct: 903 RPGVLTALMGVSGAGKTTLMDVLAGRK 929
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 408 IPRPGEVLGLVGPNGIGKSTALKILAGK 491
I +P + L+GP G GK+T L LAG+
Sbjct: 195 IVKPRRMTLLLGPPGSGKTTLLLALAGR 222
>01_05_0658 -
24043655-24043945,24044003-24044257,24044359-24044530,
24044617-24044844,24045688-24045821,24045908-24045991,
24046202-24046492,24046571-24046903,24047002-24047246,
24047476-24047742,24048305-24048465,24048556-24048872,
24048966-24049247,24049325-24049626,24049699-24049789,
24049881-24049934,24050028-24050104,24050192-24050367,
24051331-24051540,24051626-24052029
Length = 1457
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RPG + L+G +G GK+T + +LAG++
Sbjct: 885 RPGVLTALMGVSGAGKTTLMDVLAGRK 911
>01_03_0179 +
13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 408 IPRPGEVLGLVGPNGIGKSTALKILAGKQKPNL 506
I +P + L+GP G GK+T L LAGK + NL
Sbjct: 225 IIKPRRMTLLLGPPGSGKTTLLLALAGKLEDNL 257
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RPG + L+G +G GK+T + +LAG++
Sbjct: 926 RPGVLTALMGVSGAGKTTLMDVLAGRK 952
>10_08_0173 +
15414628-15414890,15415001-15415074,15416322-15416401,
15417186-15417231,15417334-15417368,15417751-15417771,
15418418-15419133,15419292-15419324,15419517-15419813,
15420213-15420659,15420738-15420886,15421408-15421697,
15421774-15421898,15422006-15422156
Length = 908
Score = 31.1 bits (67), Expect = 0.59
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGK 491
PG V ++GP+G GK+T L + GK
Sbjct: 336 PGRVTAIMGPSGAGKTTFLNAVLGK 360
>05_07_0004 + 26990250-26990516,26990877-26990931,26991286-26991461,
26991702-26991923,26992001-26992239,26992437-26992962,
26993042-26993315,26993391-26994009,26994082-26994121,
26994263-26994310,26994548-26994814,26994892-26995155,
26995260-26995904
Length = 1213
Score = 30.7 bits (66), Expect = 0.78
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +3
Query: 315 DAITIINIPSNLE-KHTTHRYSKNS----FKLHRLPIPRPGEVLGLVGPNGIGKSTALKI 479
+ +T+ + ++E H + RY F L IP G+ + LVG +G GKSTA+ +
Sbjct: 959 EGLTLELVKGDIEFTHISFRYPSRPDVQIFSDFTLSIPS-GKTVALVGQSGSGKSTAIAL 1017
Query: 480 LAGKQKPNLG 509
L P+ G
Sbjct: 1018 LERFYDPDSG 1027
>01_06_1488 +
37716986-37717076,37717424-37717558,37717755-37717831,
37717934-37718181,37718503-37718559,37718665-37718800,
37718944-37719001,37719110-37719195,37719270-37719326,
37719537-37719557,37720553-37720954,37721500-37721647,
37721940-37722036,37724065-37724202,37724496-37724598,
37724792-37724828,37724905-37725014,37725141-37725164
Length = 674
Score = 30.7 bits (66), Expect = 0.78
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 393 LHRLPIPRPGEVLGLVGPNGIGKSTAL 473
LHR P+ RPG V+ + GP+ GKS L
Sbjct: 429 LHRAPL-RPGNVVEIAGPSNSGKSQLL 454
>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
18303723-18303836,18303903-18304046,18316147-18316312,
18316396-18317130,18317219-18317422,18317496-18318177,
18318272-18318528,18318604-18319298,18319345-18319382,
18319847-18319928,18320018-18320112,18320443-18320526,
18320601-18320891,18321521-18321853,18321948-18322150,
18322243-18322399,18322482-18322585,18322675-18322835,
18323511-18323824,18324317-18324589,18324666-18324967,
18325459-18325549,18326140-18326190,18326700-18326768,
18326926-18327017,18327082-18327148,18328582-18328746,
18329027-18329103,18329572-18329766,18330208-18330275,
18331081-18331172,18331399-18331522,18331608-18331705,
18332384-18332997,18333620-18333626
Length = 2892
Score = 30.7 bits (66), Expect = 0.78
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RPG + L+G +G GK+T + +LAG++
Sbjct: 1131 RPGVLTALMGFSGAGKTTLMDVLAGRK 1157
>08_02_1615 + 28257275-28258428,28258523-28259144
Length = 591
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 402 LPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
L +P G+ + LVG +G GKST + ++ +PN G
Sbjct: 455 LSVPA-GKTIALVGSSGSGKSTVVSLIERFYEPNAG 489
>04_03_0867 -
20414999-20415160,20415255-20415384,20415515-20415702,
20415967-20416001,20416363-20416579,20416737-20416820,
20417609-20417875,20417954-20418061,20418163-20418249,
20418629-20419399
Length = 682
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQKP 500
R GE + VGP+G GK+T K+L +P
Sbjct: 481 RSGETIAFVGPSGGGKTTLAKLLLRLYQP 509
>09_02_0434 +
9365038-9366150,9367352-9368680,9368906-9370012,
9370960-9371022
Length = 1203
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 318 AITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGPNGIGKSTALK 476
A+ +NIP +E H + R P ++G+ GP G+GK+ LK
Sbjct: 122 ALAAVNIP--IESVQIHSQESILEEALRCITEGPSAIIGICGPGGVGKTHLLK 172
>06_01_0102 +
834660-834911,835460-835568,835891-836006,836116-836235,
836398-836436,836678-836811,837035-837299,837615-837698,
837943-838003,838748-838810,839174-839216,839632-839711,
839831-840267
Length = 600
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 426 VLGLVGPNGIGKSTALKILAG 488
V+G++GP G+GKST + L G
Sbjct: 94 VIGVIGPTGVGKSTIMNELYG 114
>03_06_0759 -
36059872-36059928,36059934-36060125,36060241-36060348,
36060440-36060712,36060923-36061009,36061085-36061276,
36061841-36061969,36062087-36062200,36062446-36062490,
36062785-36062956,36063229-36063515,36063989-36064456
Length = 707
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGKQKP 500
PG + ++GP GKST L+ +AG+ +P
Sbjct: 107 PGTLTVIMGPARSGKSTLLRAIAGRLRP 134
>03_06_0128 -
31879286-31879381,31879463-31879574,31879680-31879747,
31880959-31881072,31881207-31881247,31881340-31881393,
31881785-31881866,31882063-31882116
Length = 206
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 267 EELCIGCGICVKKCPFDAITI 329
EE CI C +C CP AITI
Sbjct: 104 EERCIACKLCEAICPAQAITI 124
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 276 CIGCGICVKKCPFDAI 323
CI CG C + CP DAI
Sbjct: 146 CIYCGFCQEACPVDAI 161
>10_03_0021 +
7129786-7130117,7130227-7130347,7131048-7131136,
7131375-7131459,7131609-7131771,7132861-7132937,
7133016-7133160,7133236-7133537,7133615-7133720,
7134781-7134935,7135556-7135712,7135799-7135891,
7136232-7136359,7136439-7136696,7136855-7137145,
7137235-7137318,7138335-7138468,7138557-7138784,
7139778-7139958,7140021-7140108,7140268-7140434,
7140750-7141012,7141117-7141120
Length = 1216
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RP + LVG +G GK+T + +LAG++
Sbjct: 674 RPRVLTALVGASGSGKTTLMDVLAGRK 700
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGK 491
+PG + L+GP GKST L LA K
Sbjct: 178 KPGRMTLLLGPPASGKSTLLLALADK 203
>05_01_0271 + 2105122-2105470,2105557-2105954,2106035-2106273,
2107120-2107645,2107817-2108090,2108197-2109056,
2109201-2109467,2109711-2109974,2110063-2110356,
2110455-2110814
Length = 1276
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
G+ + LVG +G GKSTA+ +L P+ G
Sbjct: 1058 GKTVALVGESGSGKSTAISLLQRFYDPDAG 1087
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
G + LVG +G GKST + ++ P LG
Sbjct: 406 GTTVALVGQSGSGKSTVISLIERFYDPQLG 435
>05_01_0055 - 390371-390457,390637-390715,390804-390856,390951-391105,
391216-391422,391518-391658,392044-392202,392296-392476,
393153-393252,393321-393470,393581-393705,394006-394096,
394364-394472,394558-394657,395143-395307,395401-395506,
395590-395894,396003-396241,397036-397114,397189-397327,
398004-398054,398316-398770,398961-399158,399199-399261,
400212-400436,400706-400988,401109-401170
Length = 1368
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLGRFADPPD 530
G+ L L GPNG GKS+ ++L GR P D
Sbjct: 1169 GKSLLLTGPNGSGKSSIFRVLRDLWPVCSGRVTKPSD 1205
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAG 488
G L + GPNG GKS+ ++L G
Sbjct: 512 GSNLLITGPNGSGKSSLFRVLGG 534
>04_04_0271 + 24069218-24069433,24069695-24070365,24070458-24073410
Length = 1279
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLGRFA 518
G +GLVG +G GKST + +L P+ G +
Sbjct: 373 GATVGLVGGSGSGKSTVISLLQRFYSPDSGEIS 405
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKIL 482
G+ + LVGP+G GKST + ++
Sbjct: 1056 GKTVALVGPSGSGKSTVIGLI 1076
>01_06_1760 -
39697079-39697162,39697280-39697340,39697415-39697479,
39697579-39697860,39697938-39698012,39698121-39698195,
39698343-39698399,39698653-39698726,39698912-39699055,
39699608-39699662,39700027-39700149,39700276-39700320,
39701068-39701160,39701249-39701662
Length = 548
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
P EV+ +VG +G GKST + +L +P G+
Sbjct: 329 PNEVVAIVGLSGSGKSTVVNLLLRLYEPTDGQ 360
>01_06_1264 + 35854600-35856849
Length = 749
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGK 491
R GE+L ++G +G GKST + LA +
Sbjct: 139 REGEILAVMGASGSGKSTLIDALANR 164
>11_06_0150 - 20640535-20640600,20641299-20641451,20641567-20641830
Length = 160
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 381 NSFKLHRLPIPRPGEVLGLV-GPNGIGKSTALKILA 485
N HRL RPG L LV GPNG GKS+ + +A
Sbjct: 46 NFMTYHRLAC-RPGPRLNLVLGPNGSGKSSLVCAIA 80
>09_02_0504 -
10013784-10014041,10014558-10014660,10014932-10015093,
10015416-10015549,10015633-10015716,10015839-10016129,
10016362-10016694,10016823-10016965,10017273-10017429,
10017513-10017616,10017728-10017888,10017971-10018287,
10018396-10018677,10018759-10019226,10019338-10019391,
10019689-10019742,10019943-10020021,10020108-10020196,
10021153-10021273,10022321-10022637
Length = 1236
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
R G + L+G +G GK+T L +LAG++
Sbjct: 805 RQGVLTALMGVSGAGKTTLLDVLAGRK 831
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 393 LHRLP-IPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
LH + I +P + L+GP G GK++ L LAG GR
Sbjct: 165 LHNVSGIIKPHRMTLLLGPPGSGKTSLLLALAGTSTLKFGR 205
>06_03_0437 -
20765682-20765951,20766040-20766294,20766374-20766545,
20766964-20767097,20767205-20767288,20767369-20767659,
20767867-20768214,20768321-20768496,20768579-20768695,
20768780-20768936,20769110-20769225,20769323-20769483,
20769567-20769883,20769969-20770250,20770347-20770648,
20771977-20772067,20773203-20773256,20773723-20773812
Length = 1138
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQ 494
RP + L+G +G GK+T + +LAG++
Sbjct: 644 RPAVLTALMGVSGAGKTTLMDVLAGRK 670
>05_01_0149 + 989698-991797
Length = 699
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGK 491
R GE+ ++G +G GKST + LAG+
Sbjct: 87 RDGELFAVMGASGSGKSTLVDALAGR 112
>03_02_0582 + 9624481-9626844
Length = 787
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGK 491
R GE++ ++G +G GKST + LA +
Sbjct: 166 RDGEIMAVLGASGSGKSTLIDALANR 191
>03_06_0004 +
30936670-30936726,30936858-30936905,30937045-30937080,
30937184-30937258,30937568-30937692,30937770-30937779,
30938125-30938296,30938547-30938665,30938868-30938978,
30939053-30939197,30939340-30939472,30939545-30939620,
30940141-30940206,30940308-30940415,30940750-30940857,
30940948-30941145,30941343-30941591
Length = 611
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
PG + LVGP+G GK+T ++ P GR
Sbjct: 377 PGSKVALVGPSGGGKTTIANLIERFYDPLKGR 408
>02_02_0682 - 12923103-12923747,12924607-12924870,12924953-12925219,
12925301-12925529,12925614-12926295,12926409-12926682,
12926822-12927347,12927460-12927698,12927799-12927896,
12928017-12928020,12928657-12928832,12929593-12929647,
12930787-12931047
Length = 1239
Score = 28.3 bits (60), Expect = 4.1
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Frame = +3
Query: 315 DAITIINIPSNLE-KHTTHRYSKNS----FKLHRLPIPRPGEVLGLVGPNGIGKSTALKI 479
D + I N+E +H + +Y + F L IP G+ + LVG +G GKST + +
Sbjct: 985 DGMAPEKIEGNIEFQHVSFKYPARTDVQIFTNLCLRIPS-GKTVALVGESGSGKSTVVAL 1043
Query: 480 LAGKQKPNLGR-FADPPD 530
L P+ G F D D
Sbjct: 1044 LERFYDPDSGAIFLDGMD 1061
>02_02_0490 - 10879761-10879861,10879946-10880185,10880274-10880337,
10880426-10880731,10881098-10881312,10881417-10881711,
10882193-10882357,10882477-10882527,10882657-10883109,
10883195-10883281,10883736-10884800,10884858-10885376
Length = 1186
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +3
Query: 339 PSN--LEKHTTH-RYSKN-SFKLHRLPIPRPGEV-LGLVGPNGIGKSTALKILAGKQKPN 503
P+N +E H RY+ F L L PG + G+VG G GKST ++ L +P+
Sbjct: 939 PTNGEIELRNLHVRYATQLPFVLKGLTCTLPGGLKTGIVGRTGSGKSTLIQALFRIVEPS 998
Query: 504 LGR 512
+G+
Sbjct: 999 IGQ 1001
>10_01_0133 + 1621574-1625779
Length = 1401
Score = 27.9 bits (59), Expect = 5.5
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 342 SNLEKHTTHRYSKNSFKLHRLPIPRPG-EVLGLVGPNGIGKSTALKILAGKQK 497
++LE RY++ ++ + R G VL +VGP GIGK+T + L Q+
Sbjct: 193 TSLEAKLYGRYAEFYAAINEITGDRDGLAVLPVVGPGGIGKTTFTQHLFHDQR 245
>05_04_0388 - 20841566-20841667,20841861-20842031
Length = 90
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +3
Query: 396 HRLPIPRPGEVLGLVGPNGIGKSTA----LKILAGKQ 494
H P+P PG LG G G G S KI GKQ
Sbjct: 27 HATPLPVPGSWLGATGARGTGCSAVDGEPDKIFVGKQ 63
>11_04_0359 +
16735204-16735676,16736597-16736647,16736860-16736934,
16737011-16737062,16737147-16737280,16737397-16737511,
16737665-16737751,16737855-16737903,16738351-16738435,
16738641-16738715,16738848-16739029,16739905-16739969
Length = 480
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 435 LVGPNGIGKSTALKILAGKQKPNLG 509
L G +G GK+T L++LAG +P G
Sbjct: 204 LFGRSGSGKTTLLQLLAGLSEPTHG 228
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 375 SKNSFKLHR-LPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
SKN F++ R + +P+P L L G G+GK++ + LAG N+ R
Sbjct: 1629 SKNVFRVLRGMQLPKP---LLLEGSPGVGKTSLIVALAGFSGHNVVR 1672
>08_02_0669 + 19868149-19870179
Length = 676
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +3
Query: 117 TDKLTRIAIVNADRCKPKRCRQECKKSCPLVRMGKLCIEVTPNDKIATISEELCIGCGI 293
TD +T DR KR + ++CP+ +V PN + I E+L + G+
Sbjct: 283 TDPVTLATGQTYDRASIKRWVKSGCRTCPVTGEKLRSADVVPNVAVRGIVEQLLLSSGV 341
>06_01_0144 + 1089090-1091390
Length = 766
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 252 FYHWVLLRCTVCPYAQVGNSSCIPVDIFLVC 160
+YH VL PY V N C PV +F +C
Sbjct: 351 YYHSVLPVVLASPYFFVVNYLCFPVVVFGLC 381
>03_02_0583 + 9635002-9637299
Length = 765
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGK 491
R GE++ ++G +G GK+T + LA +
Sbjct: 140 REGEIMAVLGASGAGKTTLIDALADR 165
>01_07_0299 +
42594363-42594424,42594516-42594798,42595185-42595409,
42596395-42596592,42596871-42597325,42597824-42597962,
42598035-42598113,42598686-42598924,42599058-42599362,
42599449-42599560,42599640-42599804,42599933-42600071,
42600111-42600219,42600733-42600823,42600940-42601064,
42601148-42601297,42601383-42601455,42601630-42601810,
42601888-42602046,42602939-42603085,42603176-42603220,
42603305-42603382,42603565-42603719,42603875-42603927,
42604012-42604090,42604271-42604357
Length = 1310
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAG 488
G L + GPNG GKS+ ++L G
Sbjct: 474 GSNLLITGPNGSGKSSLFRVLGG 496
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAG 488
G+ L + GPNG GKS+ ++L G
Sbjct: 1139 GKSLLVTGPNGSGKSSIFRVLRG 1161
>01_06_0365 + 28767538-28767696,28768299-28768520,28768630-28768868,
28769499-28770024,28770115-28770388,28770495-28771134,
28771220-28771448,28771682-28771948,28772031-28772294,
28772700-28773344
Length = 1154
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 402 LPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
L IP G+ + LVG +G GKST + +L P+ G
Sbjct: 934 LGIPS-GKTVALVGESGSGKSTVIALLERFYDPHSG 968
>01_05_0215 + 19374279-19374327,19374629-19374633,19376902-19376956,
19377159-19377334,19378020-19378241,19378334-19378572,
19379201-19379726,19379801-19380074,19380524-19381187,
19381604-19381832,19381924-19382190,19382308-19382496,
19382664-19383308
Length = 1179
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 435 LVGPNGIGKSTALKILAGKQKPNLGR 512
LVG +G GKST + +L +P+ GR
Sbjct: 969 LVGESGSGKSTVISLLERFYEPDAGR 994
>11_02_0150 - 8816714-8817806,8817993-8818126
Length = 408
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 426 VLGLVGPNGIGKSTALKILAGKQK 497
VL L GP GIGK+T ++ + Q+
Sbjct: 227 VLSLFGPGGIGKTTLVQYIYNNQE 250
>06_01_0602 - 4342333-4342790,4342899-4345623
Length = 1060
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 325 PSSIFHQIWRNTPLIVIPRILSNFTGYQFHVLE 423
P+ +F +W N + IPR LSN T ++ +LE
Sbjct: 239 PNLMFLVLWANNLVGEIPRSLSNSTNLKWLLLE 271
>05_06_0191 - 26265460-26267016,26267858-26268356,26268789-26268859,
26269079-26269515,26269626-26269681,26269682-26270479,
26270918-26270973
Length = 1157
Score = 27.1 bits (57), Expect = 9.6
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 6/140 (4%)
Frame = +3
Query: 96 RKRDNEETDKLTRIAIVNADRCKPKRCRQECKKSCPLVRM-GKLCIEVTPNDKIATISEE 272
R RD EE + R A+ +R K R + R L VT ++I ++E
Sbjct: 765 RFRDEEEDEVTPRFALSKFNRAKRIRFSDSSSNTQIQTRSTNDLHQTVTSLERIIGDTKE 824
Query: 273 LCIGCGIC--VKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGE---VLGL 437
+ V + P+ T + + + R + SF L R P+ E VL +
Sbjct: 825 FVVFLMSYPPVYRQPYS--THLYLDGCMFNRQMERENAISFLLQREPLAVAEEIVQVLPV 882
Query: 438 VGPNGIGKSTALKILAGKQK 497
VGP +GKST ++ + Q+
Sbjct: 883 VGPEFVGKSTLVEHICRDQR 902
>04_03_0989 - 21475147-21475361,21477029-21477074,21477364-21479292
Length = 729
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +3
Query: 372 YSKNSFKLHRLPIPRPGEVLGLVGPNGIGKSTALKILAGKQK 497
++K+ + LHR+ +P L ++G GIG + + + +QK
Sbjct: 683 HAKHMYNLHRMKHQKPKVYLSVLGAVGIGIAVPVYAVVFQQK 724
>04_03_0687 +
18713603-18713962,18715318-18715539,18717068-18717256,
18717419-18717612,18718193-18718328
Length = 366
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQ 494
G+ +VGP+G+GKS+ + L Q
Sbjct: 156 GQTTVIVGPSGVGKSSLINALRSNQ 180
>02_05_0385 -
28506326-28506891,28506993-28507405,28507496-28507743,
28507820-28508480,28508572-28509498,28509588-28509847,
28509943-28510143,28515547-28515633,28516200-28516375,
28516465-28516519,28516623-28516910
Length = 1293
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 393 LHRLPIPRP-GEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
L R + P G+++ LVG +G GKST + ++ +P G
Sbjct: 423 LDRFSLDFPAGKIVALVGGSGSGKSTVVSLIERFYEPLTG 462
>02_02_0025 + 6183328-6186127,6186265-6186623
Length = 1052
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +3
Query: 183 ECKKSC--PLVRMGKLCIEVTPNDKI 254
E +SC P+V++G LC ++P D++
Sbjct: 1007 EIMQSCIIPMVKLGLLCSSISPKDRL 1032
>02_01_0672 -
4989053-4990432,4990523-4991410,4995896-4996436,
4996532-4997168,4997266-4997320,4997439-4997675
Length = 1245
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 387 FKLHRLPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
F L +P G + LVG +G GKST + +L P+ G
Sbjct: 377 FVSFNLRVPA-GRTVALVGGSGSGKSTVIALLERFYDPSAG 416
>02_01_0670 -
4976658-4978037,4978128-4979015,4982590-4983130,
4983209-4983845,4983962-4983992,4984094-4984324
Length = 1235
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 387 FKLHRLPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
F L +P G + LVG +G GKST + +L P+ G
Sbjct: 367 FVSFNLRVPA-GRTVALVGGSGSGKSTVIALLERFYDPSAG 406
>01_06_0555 -
30182818-30183169,30183268-30183674,30183804-30184773,
30184829-30184902,30184941-30185084,30185186-30185365,
30185448-30185988,30186081-30186538,30187723-30187901,
30187998-30188052,30188217-30188468
Length = 1203
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 402 LPIPRPGEVLGLVGPNGIGKSTALKIL 482
L IP G+ + LVG +G GKSTA+ ++
Sbjct: 387 LQIPA-GQTVALVGSSGSGKSTAIALV 412
>01_05_0212 + 19347142-19347444,19348853-19348907,19349117-19349292,
19350033-19350254,19350359-19350597,19351100-19351625,
19351707-19351980,19352166-19352225,19352362-19353025,
19353747-19353975,19354071-19354337,19354414-19354602,
19354771-19355415
Length = 1282
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 429 LGLVGPNGIGKSTALKILAGKQKPNLGR 512
+ LVG +G GKSTA+ +L P+ G+
Sbjct: 1070 VALVGESGSGKSTAIALLERFYDPDTGK 1097
>01_01_0517 + 3803740-3806106,3806226-3806312,3806397-3807035,
3807118-3807282,3807363-3807657,3807739-3807953,
3808125-3808430,3808539-3808602,3808735-3808974,
3809150-3809253
Length = 1493
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 369 RYSKN-SFKLHRLPIPRPGEV-LGLVGPNGIGKSTALKILAGKQKPNLGR 512
RY+ + F L L + PG + G+VG G GKST ++ L P +G+
Sbjct: 1258 RYAPHLPFVLKGLTVTFPGGMKTGIVGRTGSGKSTLIQALFRIIDPTVGQ 1307
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,064,245
Number of Sequences: 37544
Number of extensions: 340903
Number of successful extensions: 1377
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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