Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_D24
(541 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical ... 217 6e-57
Z75537-2|CAA99835.1| 622|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical ... 39 0.003
AF098999-6|AAC68724.2| 787|Caenorhabditis elegans Half transpor... 37 0.011
Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical pr... 35 0.033
AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transport... 35 0.033
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 35 0.043
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 35 0.043
AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical ... 34 0.057
AF040659-5|AAO12389.1| 674|Caenorhabditis elegans Half transpor... 34 0.075
AF040659-4|AAK39394.1| 815|Caenorhabditis elegans Half transpor... 34 0.075
Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical p... 33 0.100
U20783-1|AAC46845.1| 535|Caenorhabditis elegans unknown protein. 33 0.100
AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical ... 33 0.100
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 33 0.13
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 33 0.13
U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z46787-11|CAA86750.1| 610|Caenorhabditis elegans Hypothetical p... 32 0.23
U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical pr... 32 0.23
U00037-2|AAA50662.1| 212|Caenorhabditis elegans Hypothetical pr... 32 0.23
AF140272-1|AAD34863.1| 212|Caenorhabditis elegans NADH oxidored... 32 0.23
AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transport... 32 0.23
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p... 32 0.30
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ... 32 0.30
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ... 32 0.30
AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transpor... 31 0.40
Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical pr... 31 0.53
AL032646-1|CAA21676.1| 385|Caenorhabditis elegans Hypothetical ... 31 0.70
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 31 0.70
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 31 0.70
Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical p... 30 0.93
Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical pr... 30 0.93
Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical pr... 30 1.2
X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein ... 30 1.2
AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotei... 30 1.2
Z83319-4|CAB05909.1| 734|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr... 29 2.1
U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein ... 29 2.1
EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transport... 29 2.1
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c... 29 2.1
AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transpor... 29 2.1
AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical... 29 2.1
AF067213-1|AAC17000.2| 462|Caenorhabditis elegans Hypothetical ... 29 2.8
Z70783-5|CAA94855.1| 121|Caenorhabditis elegans Hypothetical pr... 28 3.7
U46673-6|AAC48149.2| 1382|Caenorhabditis elegans P-glycoprotein ... 28 3.7
Z98866-7|CAB11549.1| 454|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81044-9|CAB02812.2| 677|Caenorhabditis elegans Hypothetical pr... 28 4.9
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 27 6.5
U00043-12|AAC77504.2| 613|Caenorhabditis elegans Hypothetical p... 27 6.5
AF125954-5|AAD14708.2| 338|Caenorhabditis elegans Seven tm rece... 27 6.5
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 27 8.6
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 27 8.6
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 27 8.6
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 8.6
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 8.6
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 27 8.6
>AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical
protein Y39E4B.1 protein.
Length = 610
Score = 217 bits (529), Expect = 6e-57
Identities = 104/151 (68%), Positives = 113/151 (74%), Gaps = 3/151 (1%)
Frame = +3
Query: 90 MSRKRD---NEETDKLTRIAIVNADRCKPKRCRQECKKSCPLVRMGKLCIEVTPNDKIAT 260
MSRK N ETD RIAIV DRCKPK C CK++CP+ R GK CI V I+
Sbjct: 1 MSRKGPLIKNNETDVPLRIAIVEKDRCKPKNCGLACKRACPVNRQGKQCIVVEATSTISQ 60
Query: 261 ISEELCIGCGICVKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLV 440
ISE LCIGCGICVKKCP+DAI IIN+P+NL TTHRYS+NSFKLHRLP PR GEVLGLV
Sbjct: 61 ISEILCIGCGICVKKCPYDAIKIINLPANLANETTHRYSQNSFKLHRLPTPRCGEVLGLV 120
Query: 441 GPNGIGKSTALKILAGKQKPNLGRFADPPDW 533
G NGIGKSTALKILAGKQKPNLG F +W
Sbjct: 121 GTNGIGKSTALKILAGKQKPNLGNFQKEQEW 151
Score = 33.1 bits (72), Expect = 0.13
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 423 EVLGLVGPNGIGKSTALKILAGKQKP 500
E++ ++G NG GK+T +K++AG KP
Sbjct: 382 EIIVMLGENGTGKTTMIKMMAGSLKP 407
>Z75537-2|CAA99835.1| 622|Caenorhabditis elegans Hypothetical
protein F18E2.2 protein.
Length = 622
Score = 40.7 bits (91), Expect = 7e-04
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 429 LGLVGPNGIGKSTALKILAGKQKPNLG 509
+ +VGPNG+GKST LK+L GK PN G
Sbjct: 433 IAIVGPNGVGKSTLLKLLIGKIDPNDG 459
Score = 31.9 bits (69), Expect = 0.30
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQ 494
G GLVGPNG+GK+T LK + ++
Sbjct: 105 GRRYGLVGPNGMGKTTLLKHIGARK 129
>AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical
protein Y42G9A.6a protein.
Length = 684
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 408 IPRPGEVLGLVGPNGIGKSTALKILAGKQKPNL 506
+ RPGEV ++GP+G GK+T L +L + NL
Sbjct: 88 VARPGEVTAIIGPSGAGKTTLLNVLTKRNLSNL 120
>AF098999-6|AAC68724.2| 787|Caenorhabditis elegans Half transporter
(pgp related)protein 4 protein.
Length = 787
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
PGE + LVGP+G GKS+ + +L PN G+
Sbjct: 525 PGETVALVGPSGSGKSSCISLLENFYVPNAGQ 556
>Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical
protein F19B6.4 protein.
Length = 695
Score = 35.1 bits (77), Expect = 0.033
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 408 IPRPGEVLGLVGPNGIGKSTALKILAGKQKPNL 506
+ RPGE+ ++G +G GK+T L IL G+ N+
Sbjct: 125 VARPGELTFIMGSSGAGKTTLLNILTGRNLKNI 157
>AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transporter
family protein 2 protein.
Length = 1551
Score = 35.1 bits (77), Expect = 0.033
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
PGE GL+G NG GK+T +L K +P G
Sbjct: 1232 PGECFGLLGLNGAGKTTTFAMLTAKIRPGHG 1262
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical protein
C47A10.1 protein.
Length = 1294
Score = 34.7 bits (76), Expect = 0.043
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKIL 482
+PG+ L LVGP+G GKST + +L
Sbjct: 1056 KPGQTLALVGPSGCGKSTVISLL 1078
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
+PG+ + LVG +G GKST +++L P+ G+
Sbjct: 409 QPGQTVALVGSSGCGKSTIIQLLQRFYNPDAGQ 441
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 34.7 bits (76), Expect = 0.043
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKIL 482
+PG+ L LVGP+G GKST + +L
Sbjct: 1056 KPGQTLALVGPSGCGKSTVISLL 1078
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
+PG+ + LVG +G GKST +++L P+ G+
Sbjct: 409 QPGQTVALVGSSGCGKSTIIQLLQRFYNPDAGQ 441
>AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical
protein Y50E8A.16 protein.
Length = 807
Score = 34.3 bits (75), Expect = 0.057
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 378 KNSFKLHRLPIP-RPGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
KN+ L+++ + PG+ + LVGP+G GKST + ++ P GR
Sbjct: 562 KNANVLNKINLSIDPGKTIALVGPSGNGKSTLVSLIQQFYTPQSGR 607
>AF040659-5|AAO12389.1| 674|Caenorhabditis elegans Half transporter
(pgp related)protein 9, isoform b protein.
Length = 674
Score = 33.9 bits (74), Expect = 0.075
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
PGEV+ LVGP+G GKS+ + +L +P G
Sbjct: 549 PGEVVALVGPSGGGKSSCIAMLEHFYEPTSG 579
>AF040659-4|AAK39394.1| 815|Caenorhabditis elegans Half transporter
(pgp related)protein 9, isoform a protein.
Length = 815
Score = 33.9 bits (74), Expect = 0.075
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
PGEV+ LVGP+G GKS+ + +L +P G
Sbjct: 549 PGEVVALVGPSGGGKSSCIAMLEHFYEPTSG 579
>Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 33.5 bits (73), Expect = 0.100
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 339 PSNLEKHTTHRYSKNSFKLHR---LPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
P + +H + RY++N+ +++ I + LVGPNG GKST LK+L P G
Sbjct: 392 PVIMVQHVSFRYNENTPWIYKDIDFGIDLDTRI-ALVGPNGAGKSTLLKLLCTDVMPTDG 450
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKP 500
G GL+G NG GKST ++ + K+ P
Sbjct: 107 GRRYGLIGLNGSGKSTIIQAIYNKEMP 133
>U20783-1|AAC46845.1| 535|Caenorhabditis elegans unknown protein.
Length = 535
Score = 33.5 bits (73), Expect = 0.100
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 339 PSNLEKHTTHRYSKNSFKLHR---LPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
P + +H + RY++N+ +++ I + LVGPNG GKST LK+L P G
Sbjct: 391 PVIMVQHVSFRYNENTPWIYKDIDFGIDLDTRI-ALVGPNGAGKSTLLKLLCTDVMPTDG 449
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKP 500
G GL+G NG GKST ++ + K+ P
Sbjct: 106 GRRYGLIGLNGSGKSTIIQAIYNKEMP 132
>AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 33.5 bits (73), Expect = 0.100
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 339 PSNLEKHTTHRYSKNSFKLHR---LPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
P + +H + RY++N+ +++ I + LVGPNG GKST LK+L P G
Sbjct: 392 PVIMVQHVSFRYNENTPWIYKDIDFGIDLDTRI-ALVGPNGAGKSTLLKLLCTDVMPTDG 450
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKP 500
G GL+G NG GKST ++ + K+ P
Sbjct: 107 GRRYGLIGLNGSGKSTIIQAIYNKEMP 133
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical protein
K08E7.9 protein.
Length = 1321
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKIL 482
PG+ L LVGP+G GKST + +L
Sbjct: 1104 PGQTLALVGPSGCGKSTVVALL 1125
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical protein
T21E8.1b protein.
Length = 1204
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKIL 482
PG+ L LVGP+G GKST + +L
Sbjct: 984 PGKTLALVGPSGCGKSTIISLL 1005
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKIL 482
GE + LVG +G GKST +++L
Sbjct: 350 GECIALVGASGSGKSTVVQLL 370
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.1a protein.
Length = 1263
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKIL 482
PG+ L LVGP+G GKST + +L
Sbjct: 1043 PGKTLALVGPSGCGKSTIISLL 1064
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKIL 482
GE + LVG +G GKST +++L
Sbjct: 409 GECIALVGASGSGKSTVVQLL 429
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.2 protein.
Length = 1263
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKIL 482
PG+ L LVGP+G GKST + +L
Sbjct: 1043 PGKTLALVGPSGCGKSTIISLL 1064
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKIL 482
GE + LVG +G GKST +++L
Sbjct: 409 GECIALVGASGSGKSTVVQLL 429
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKIL 482
PG+ L LVGP+G GKST + +L
Sbjct: 1104 PGQTLALVGPSGCGKSTVVALL 1125
>U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical
protein F42A10.1 protein.
Length = 712
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQ 494
G GLVG NGIGK+T LK+++ +Q
Sbjct: 204 GRRYGLVGRNGIGKTTLLKMISSQQ 228
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 435 LVGPNGIGKSTALKILAGKQKPNLG 509
+VG NG GK+T LK+L +P++G
Sbjct: 528 IVGENGAGKTTLLKLLLDDLQPSVG 552
>Z46787-11|CAA86750.1| 610|Caenorhabditis elegans Hypothetical
protein C16C10.12 protein.
Length = 610
Score = 32.3 bits (70), Expect = 0.23
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Frame = +3
Query: 315 DAITIINIP-SNLEKHTTHR-YSKNSFKL-HRLP-IPRPGEVLGLVGPNGIGKSTALKIL 482
+ +T I + N+E T + +SK +L +R+ I +PGE++ L+G +G GK+T + +L
Sbjct: 28 EVVTPITVTWENIEVKTRKKLFSKKQKQLLNRVSGIAKPGEMVALMGASGAGKTTLMNVL 87
>U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical protein
C25F6.3 protein.
Length = 1059
Score = 32.3 bits (70), Expect = 0.23
Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Frame = +3
Query: 204 LVRMGKLCIEVTPNDKIATISEELCIGCGICVKKCPFDAITIINI-PSNLEKHTTHRYSK 380
L R+G K+A I +++CI CG C C I P + H T
Sbjct: 940 LPRIGPYVTLDNQEQKVAIIDDDMCINCGKCYMTCNDSGYQAITFDPVTHQPHVTEDDCT 999
Query: 381 NSFKLHRL-PIPRPGEVLGLVGP 446
+ + PIP E++ GP
Sbjct: 1000 GCTLCYSVCPIPECIEMVPRTGP 1022
>U00037-2|AAA50662.1| 212|Caenorhabditis elegans Hypothetical
protein T20H4.5 protein.
Length = 212
Score = 32.3 bits (70), Expect = 0.23
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 276 CIGCGICVKKCPFDAITI-INIPSNLEKHTTHRYSKNSFKLH 398
CI CG+C + CP DAI N + E H Y+K L+
Sbjct: 152 CIYCGLCQEACPVDAIVEGPNFEYSTETHEELLYNKEKLLLN 193
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 267 EELCIGCGICVKKCPFDAITI 329
EE CI C +C CP AITI
Sbjct: 110 EERCIACKLCEAICPAQAITI 130
>AF140272-1|AAD34863.1| 212|Caenorhabditis elegans NADH
oxidoreductase complex I 23.8kDa subunit protein.
Length = 212
Score = 32.3 bits (70), Expect = 0.23
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 276 CIGCGICVKKCPFDAITI-INIPSNLEKHTTHRYSKNSFKLH 398
CI CG+C + CP DAI N + E H Y+K L+
Sbjct: 152 CIYCGLCQEACPVDAIVEGPNFEYSTETHEELLYNKEKLLLN 193
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 267 EELCIGCGICVKKCPFDAITI 329
EE CI C +C CP AITI
Sbjct: 110 EERCIACKLCEAICPAQAITI 130
>AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transporter
family protein 4 protein.
Length = 1802
Score = 32.3 bits (70), Expect = 0.23
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
PG+ L+G NG GKST +L G P+ G
Sbjct: 624 PGQCTVLLGHNGAGKSTTFSMLTGVASPSSG 654
>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 31.9 bits (69), Expect = 0.30
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
GEV+ L G +G G L I+AG+ KP G
Sbjct: 420 GEVVTLYGHHGCGSGEILSIIAGQMKPEYG 449
>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 31.9 bits (69), Expect = 0.30
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
GEV+ L G +G G L I+AG+ KP G
Sbjct: 420 GEVVTLYGHHGCGSGEILSIIAGQMKPEYG 449
>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 31.9 bits (69), Expect = 0.30
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
GEV+ L G +G G L I+AG+ KP G
Sbjct: 420 GEVVTLYGHHGCGSGEILSIIAGQMKPEYG 449
>AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transporter
(pgp related)protein 6 protein.
Length = 668
Score = 31.5 bits (68), Expect = 0.40
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +3
Query: 402 LPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
L IP G+V+ L GP+G GKST +L +P GR
Sbjct: 448 LSIPA-GQVVALCGPSGEGKSTITHLLERFYEPKSGR 483
>Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical
protein C10C6.5 protein.
Length = 610
Score = 31.1 bits (67), Expect = 0.53
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 408 IPRPGEVLGLVGPNGIGKSTALKILAGK 491
I +PG++L L+G +G GK+T L +L +
Sbjct: 57 IAKPGQLLALMGASGAGKTTLLNMLLSR 84
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical protein
C05A9.1 protein.
Length = 1283
Score = 31.1 bits (67), Expect = 0.53
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 354 KHTTHRYSKNSFK--LHRLPIPRP-GEVLGLVGPNGIGKSTALKIL 482
K+ + Y++ S K L + + P G L LVGP+G GKST + +L
Sbjct: 1039 KNVSFEYAQRSDKMILDGVSLKLPAGRTLALVGPSGSGKSTIISLL 1084
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLGRFA 518
GE + LVG +G GKST +++L + GR +
Sbjct: 433 GECIALVGASGSGKSTVIQLLLHYYNIDSGRIS 465
>Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical protein
F42E11.1 protein.
Length = 1266
Score = 31.1 bits (67), Expect = 0.53
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKIL 482
GE + LVGP+G GKST+++++
Sbjct: 1055 GETVALVGPSGCGKSTSIQLI 1075
Score = 30.3 bits (65), Expect = 0.93
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKIL 482
PGE + LVG +G GKST++ +L
Sbjct: 401 PGETIALVGHSGCGKSTSIGLL 422
>AL032646-1|CAA21676.1| 385|Caenorhabditis elegans Hypothetical
protein Y54E2A.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 0.70
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 426 VLGLVGPNGIGKSTALKILAGKQKPNLGR 512
V+ +GP G GKST L +LAG + R
Sbjct: 88 VISAIGPQGAGKSTLLSMLAGNNSRQMYR 116
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 30.7 bits (66), Expect = 0.70
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 396 HRLPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
HR PI R LG G GK+T LK+L G+ +L R
Sbjct: 16 HRTPIIRREIKLGCFGIGSAGKTTFLKVLKGEDPRDLLR 54
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 30.7 bits (66), Expect = 0.70
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 396 HRLPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
HR PI R LG G GK+T LK+L G+ +L R
Sbjct: 16 HRTPIIRREIKLGCFGIGSAGKTTFLKVLKGEDPRDLLR 54
>Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical
protein Y57G11C.1 protein.
Length = 633
Score = 30.3 bits (65), Expect = 0.93
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
G+ + LVGP+G GKST + ++ P GR
Sbjct: 401 GKTVALVGPSGNGKSTLVSLIQQFYTPQSGR 431
>Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical
protein F55G11.9 protein.
Length = 1431
Score = 30.3 bits (65), Expect = 0.93
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3
Query: 315 DAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGPNGIGKSTALKILAGKQ 494
+A+ I + ++ +T + N L + G+V L+G NG GKST ++ G
Sbjct: 442 NAVADIELSGLVKVYTNGEKAVNGLSLRAIR----GQVSILLGHNGCGKSTTFGMITGMH 497
Query: 495 KPNLGR 512
K GR
Sbjct: 498 KATEGR 503
>Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical
protein F22E10.1 protein.
Length = 1318
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
+PG + LVG +G GKST++ +L +P G+
Sbjct: 443 KPGTSVALVGHSGCGKSTSVGLLTRLYEPEGGK 475
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKIL 482
G+ + LVGP+G GKST + +L
Sbjct: 1105 GQTVALVGPSGTGKSTCIAML 1125
>Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical
protein F22E10.3 protein.
Length = 1327
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 408 IPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
+ PG + LVG +G GKST++ +L +P G
Sbjct: 453 VVEPGTSVALVGHSGCGKSTSVGLLTRLYEPEAG 486
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKIL 482
G+ + LVGP+G GKST + +L
Sbjct: 1114 GQTVALVGPSGSGKSTNIGML 1134
>Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKIL 482
PGE + LVG +G GKST++ +L
Sbjct: 403 PGETVALVGHSGCGKSTSIGLL 424
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKIL 482
G+ + LVGP+G GKST ++++
Sbjct: 1057 GQTVALVGPSGCGKSTTIQLI 1077
>Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKIL 482
PGE + LVG +G GKST++ +L
Sbjct: 403 PGETVALVGHSGCGKSTSIGLL 424
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKIL 482
G+ + LVGP+G GKST ++++
Sbjct: 1057 GQTVALVGPSGCGKSTTIQLI 1077
>X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein C
protein.
Length = 1254
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKIL 482
PGE + LVG +G GKST++ +L
Sbjct: 403 PGETVALVGHSGCGKSTSIGLL 424
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKIL 482
G+ + LVGP+G GKST ++++
Sbjct: 1043 GQTVALVGPSGCGKSTTIQLI 1063
>AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotein
related (146.8 kD)(pgp-14) protein.
Length = 1327
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 408 IPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
+ PG + LVG +G GKST++ +L +P G
Sbjct: 453 VVEPGTSVALVGHSGCGKSTSVGLLTRLYEPEAG 486
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKIL 482
G+ + LVGP+G GKST + +L
Sbjct: 1114 GQTVALVGPSGSGKSTNIGML 1134
>Z83319-4|CAB05909.1| 734|Caenorhabditis elegans Hypothetical
protein T02D1.5 protein.
Length = 734
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAG 488
PG + + GPNG GKS+ +IL G
Sbjct: 493 PGMHVLITGPNGCGKSSLFRILGG 516
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKIL 482
G+ L +VGP+G GKST + +L
Sbjct: 1030 GKTLAIVGPSGSGKSTIISLL 1050
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKIL 482
+ GE + LVG +G GKST +++L
Sbjct: 406 KQGECIALVGASGSGKSTIVQLL 428
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKIL 482
G+ L +VGP+G GKST + +L
Sbjct: 1030 GKTLAIVGPSGSGKSTIISLL 1050
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKIL 482
+ GE + LVG +G GKST +++L
Sbjct: 406 KQGECIALVGASGSGKSTIVQLL 428
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical
protein F22E10.2 protein.
Length = 1324
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
PG + LVG +G GKST++ +L +P G
Sbjct: 444 PGTSVALVGHSGCGKSTSVGLLTRLYEPEQG 474
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKIL 482
G+ + LVGP+G GKST + +L
Sbjct: 1111 GQTVALVGPSGSGKSTCIGML 1131
>Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical
protein DH11.3 protein.
Length = 1270
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 417 PGEVLGLVGPNGIGKSTALKIL 482
PG+ + LVG +G GKST++ +L
Sbjct: 426 PGQTVALVGTSGCGKSTSIGLL 447
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +3
Query: 360 TTHRYSKNSFKLHRLPIPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLGRFA 518
T HR F L+ IP+ G + LVG +G GKST + +L GR +
Sbjct: 1042 TPHRNVCEGFSLN---IPK-GHSIALVGASGCGKSTIISMLERFYSAKAGRIS 1090
>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical
protein C48B4.4c protein.
Length = 1704
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
G+ L+G NG GKST +AG +P GR
Sbjct: 573 GQCSILLGHNGAGKSTTFSSIAGIIRPTNGR 603
>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical
protein C48B4.4b protein.
Length = 1691
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
G+ L+G NG GKST +AG +P GR
Sbjct: 560 GQCSILLGHNGAGKSTTFSSIAGIIRPTNGR 590
>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical
protein C48B4.4a protein.
Length = 1689
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
G+ L+G NG GKST +AG +P GR
Sbjct: 560 GQCSILLGHNGAGKSTTFSSIAGIIRPTNGR 590
>U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein
related protein 2 protein.
Length = 1272
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
+ G+ + LVG +G GKST + +L P GR
Sbjct: 425 KAGDKIALVGSSGCGKSTIVNLLQRFYDPTKGR 457
>EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transporter
PGP-2 protein.
Length = 1272
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
+ G+ + LVG +G GKST + +L P GR
Sbjct: 425 KAGDKIALVGSSGCGKSTIVNLLQRFYDPTKGR 457
>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
cassette transporter protein.
Length = 1704
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
G+ L+G NG GKST +AG +P GR
Sbjct: 573 GQCSILLGHNGAGKSTTFSSIAGIIRPTNGR 603
>AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transporter
(pgp related)protein 2 protein.
Length = 761
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKILAGKQKPNLG 509
+ GE + LVGP+G GKS+ + ++ +P+ G
Sbjct: 540 KSGETVALVGPSGGGKSSIVSLIEHFYEPDEG 571
>AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical
protein Y61A9LA.10 protein.
Length = 986
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 393 LHRLPIPRPGEVLGLVGPNGIGKSTALK 476
+ R PI P ++ +VGP+ +GK+T L+
Sbjct: 1 MDRKPIETPPIIVAIVGPSKVGKTTLLR 28
>AF067213-1|AAC17000.2| 462|Caenorhabditis elegans Hypothetical
protein T25B2.2 protein.
Length = 462
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 152 GSLQTKKMSTGMQEELPTCAYGQTVHRSNT 241
G TKK++ + +E+PT G VHRS T
Sbjct: 416 GKTATKKVTIQVPDEIPTQPKGHFVHRSAT 445
>Z70783-5|CAA94855.1| 121|Caenorhabditis elegans Hypothetical
protein ZK856.7 protein.
Length = 121
Score = 28.3 bits (60), Expect = 3.7
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = -3
Query: 194 LLAFLSTSFWFATIRIYYSDTGKFICFLIISFSGHHC**KSERWRYFAYVRVSFYQPRAE 15
LL FLS + I SDT K I++ +G KSERW Y ++ + +Q +A+
Sbjct: 7 LLFFLSVALACDIIVHLKSDTDKKFSGQIVASNGK----KSERWSYLKKLQKNTFQQKAD 62
>U46673-6|AAC48149.2| 1382|Caenorhabditis elegans P-glycoprotein
related protein 10 protein.
Length = 1382
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKI 479
R GE + LVGP+G GKS+ + +
Sbjct: 1165 RGGESIALVGPSGSGKSSVISL 1186
>Z98866-7|CAB11549.1| 454|Caenorhabditis elegans Hypothetical
protein Y49E10.9 protein.
Length = 454
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNL 506
GE+ ++G +G GK+T L +L G+ L
Sbjct: 132 GELTFIMGSSGAGKTTLLNVLTGRNMDGL 160
>Z81044-9|CAB02812.2| 677|Caenorhabditis elegans Hypothetical
protein C30H6.6 protein.
Length = 677
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 408 IPRPGEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
IPR G++ ++GP+G GKS+ ++ P GR
Sbjct: 436 IPR-GKITAVIGPSGSGKSSIANLMLRLYDPADGR 469
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +3
Query: 159 CKPKRCRQECKKSCPLVRMGKLCIEVTPNDKIA---TISEELCIGCGICVKKC 308
C C Q+C SC + + + +++ P A + E CI CV+ C
Sbjct: 318 CVQSMCPQQCYPSCDMNCIQQYAVQMAPTPCAAQCMPLCESSCIARLSCVQTC 370
>U00043-12|AAC77504.2| 613|Caenorhabditis elegans Hypothetical
protein T26A5.1 protein.
Length = 613
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 414 RPGEVLGLVGPNGIGKSTALKIL 482
+ GE+L L+G +G GK+T L +L
Sbjct: 59 KSGELLALMGASGAGKTTLLNML 81
>AF125954-5|AAD14708.2| 338|Caenorhabditis elegans Seven tm
receptor protein 120 protein.
Length = 338
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 330 INIPSNLEKHTTHRYSKNSFKLHR 401
+NI + +HT HR SK ++++HR
Sbjct: 223 LNIFRTVYRHTKHRKSKKNWEIHR 246
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 342 SNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGPNGIGKSTALKILAGK 491
+ LE Y K+ K RL P VL LVGP G GK+ + +AG+
Sbjct: 209 AKLEVEEIVDYLKDPEKYSRLGGRLPKGVL-LVGPPGTGKTLLARAIAGE 257
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 228 IEVTPNDKIATISEELCIGCGICVKKC 308
IEV P A ++E LC+ C + C
Sbjct: 2283 IEVLPGRSQANLNESLCVECSVSAYPC 2309
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 228 IEVTPNDKIATISEELCIGCGICVKKC 308
IEV P A ++E LC+ C + C
Sbjct: 2298 IEVLPGRSQANLNESLCVECSVSAYPC 2324
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 228 IEVTPNDKIATISEELCIGCGICVKKC 308
IEV P A ++E LC+ C + C
Sbjct: 18109 IEVLPGRSQANLNESLCVECSVSAYPC 18135
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 228 IEVTPNDKIATISEELCIGCGICVKKC 308
IEV P A ++E LC+ C + C
Sbjct: 18124 IEVLPGRSQANLNESLCVECSVSAYPC 18150
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 420 GEVLGLVGPNGIGKSTALKILAGKQKPNLGR 512
G+V L+G NG GKST ++ G + G+
Sbjct: 477 GQVSILLGHNGCGKSTTFGMITGMHQATEGK 507
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,843,439
Number of Sequences: 27780
Number of extensions: 308978
Number of successful extensions: 1092
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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