Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_D24
(541 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 24 0.86
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 24 0.86
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 23 1.5
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 23 1.5
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 22 3.5
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 4.6
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 4.6
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 4.6
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 6.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 21 8.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.1
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 8.1
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 8.1
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 24.2 bits (50), Expect = 0.86
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 171 RCRQECKKSCPLVRMGKLCIEV 236
RC C++ CP V LCI++
Sbjct: 45 RCDGRCQRFCPNVVPKPLCIKI 66
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 24.2 bits (50), Expect = 0.86
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 171 RCRQECKKSCPLVRMGKLCIEV 236
RC C++ CP V LCI++
Sbjct: 45 RCDGRCQRFCPNVVPKPLCIKI 66
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 23.4 bits (48), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 23 EAGKRTRERRQSIANVRSFISSDVPKTR 106
E +RT+ER QS S + SD+P R
Sbjct: 182 EERQRTKERDQSEVESTSSLHSDMPIER 209
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 23.4 bits (48), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 23 EAGKRTRERRQSIANVRSFISSDVPKTR 106
E +RT+ER QS S + SD+P R
Sbjct: 182 EERQRTKERDQSEVESTSSLHSDMPIER 209
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 22.2 bits (45), Expect = 3.5
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +3
Query: 249 KIATISEELCIGCGI 293
K+ TI + C+ CG+
Sbjct: 534 KVETIGDAYCVACGL 548
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 4.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 268 SEMVAILSLGVTSMHSLPIRTSG 200
S + A +SLGVT++ ++ +TSG
Sbjct: 268 SAVPARVSLGVTTLLTMATQTSG 290
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 4.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 268 SEMVAILSLGVTSMHSLPIRTSG 200
S + A +SLGVT++ ++ +TSG
Sbjct: 268 SAVPARVSLGVTTLLTMATQTSG 290
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = -2
Query: 279 YTVLQRWSLFYHWVLLRCTVCPYAQVGN 196
Y V+ W++FY ++ +R + P+ N
Sbjct: 77 YIVILAWAIFYFFMSMRSEL-PWGSCNN 103
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 6.1
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 332 DDGDRVKGAFLYTNTAPNTQFFRDGRYF 249
D+GDR+ + N N GRYF
Sbjct: 351 DNGDRIFAEYDIINIQENGDQVSVGRYF 378
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +3
Query: 333 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 419
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +3
Query: 333 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 419
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +3
Query: 333 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 419
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +3
Query: 333 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 419
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +3
Query: 333 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 419
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +3
Query: 333 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 419
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +3
Query: 333 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 419
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +3
Query: 333 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 419
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +3
Query: 333 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 419
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 21.0 bits (42), Expect = 8.1
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 343 QIWRNTPLIVIPR 381
+IWRN + +PR
Sbjct: 73 EIWRNKLFVTVPR 85
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +3
Query: 333 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 419
N +N + H Y+K + ++ ++PIP P
Sbjct: 326 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 357
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +3
Query: 333 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 419
N +N + H Y+K + ++ ++PIP P
Sbjct: 326 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 357
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.0 bits (42), Expect = 8.1
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +3
Query: 450 GIGKSTALKILAGKQKPN 503
G+G S + ++ GKQ+P+
Sbjct: 1215 GVGVSNSGSVVLGKQQPS 1232
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 21.0 bits (42), Expect = 8.1
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +3
Query: 276 CIGCGICVKKCPF 314
C+GCG KC +
Sbjct: 36 CLGCGDSCHKCKY 48
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,289
Number of Sequences: 438
Number of extensions: 3830
Number of successful extensions: 29
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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