Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_D23
(481 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23159-1|AAA85857.1| 1005|Caenorhabditis elegans bifunctional gl... 27 7.0
AF026209-2|AAN84883.1| 863|Caenorhabditis elegans Gex interacti... 27 7.0
AF026209-1|AAB71278.2| 968|Caenorhabditis elegans Gex interacti... 27 7.0
Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical pr... 27 9.3
U41011-4|AAA82287.1| 294|Caenorhabditis elegans Hypothetical pr... 27 9.3
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 27 9.3
U00043-5|AAN65292.1| 505|Caenorhabditis elegans Hypothetical pr... 27 9.3
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr... 27 9.3
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 27 9.3
>U23159-1|AAA85857.1| 1005|Caenorhabditis elegans bifunctional
glyoxylate cycle proteinprotein.
Length = 1005
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 101 NIYVYTSDSLPLCRGTFVCRQISKVCRQILQIYNNVNIIK 220
+++ YT D L L RGT C + + Q++ ++ +K
Sbjct: 702 DVFKYTEDKLGLARGTIKCTVLIEHLLASFQLHEIIHALK 741
>AF026209-2|AAN84883.1| 863|Caenorhabditis elegans Gex interacting
protein protein7, isoform b protein.
Length = 863
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 101 NIYVYTSDSLPLCRGTFVCRQISKVCRQILQIYNNVNIIK 220
+++ YT D L L RGT C + + Q++ ++ +K
Sbjct: 662 DVFKYTEDKLGLARGTIKCTVLIEHLLASFQLHEIIHALK 701
>AF026209-1|AAB71278.2| 968|Caenorhabditis elegans Gex interacting
protein protein7, isoform a protein.
Length = 968
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 101 NIYVYTSDSLPLCRGTFVCRQISKVCRQILQIYNNVNIIK 220
+++ YT D L L RGT C + + Q++ ++ +K
Sbjct: 662 DVFKYTEDKLGLARGTIKCTVLIEHLLASFQLHEIIHALK 701
>Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical
protein F53H10.2 protein.
Length = 900
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 133 SVPRHFCVPPNFKSVPPNF 189
S P H+ VPP S+ PNF
Sbjct: 119 STPNHYSVPPRKCSLAPNF 137
>U41011-4|AAA82287.1| 294|Caenorhabditis elegans Hypothetical
protein D2024.4 protein.
Length = 294
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 267 VNNFYLFLCVPPNFEIVKICSATKKKVENHWYIL 368
++ + +C P +I K S TK K+E +W L
Sbjct: 149 IHRYTFKMCTPTQDDINKEESDTKDKIEEYWQYL 182
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 127 STSVPRHFCVPPNFKSVPPNFANI 198
S S P H C PP+ S PP ++++
Sbjct: 474 SDSEPDHHCPPPHRHSPPPAYSSL 497
>U00043-5|AAN65292.1| 505|Caenorhabditis elegans Hypothetical
protein T26A5.5b protein.
Length = 505
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 110 VYTSDSLPLCRGTFVCRQISKVCRQILQIYNNVNIIKLYHL 232
VYT D + G F+ Q K ++ Q+ N +NI + + L
Sbjct: 235 VYTPDDSLVFGGNFLHSQSCKTQLRVYQVENKLNITRKFRL 275
>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical
protein T26A5.5a protein.
Length = 1076
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 110 VYTSDSLPLCRGTFVCRQISKVCRQILQIYNNVNIIKLYHL 232
VYT D + G F+ Q K ++ Q+ N +NI + + L
Sbjct: 235 VYTPDDSLVFGGNFLHSQSCKTQLRVYQVENKLNITRKFRL 275
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 127 STSVPRHFCVPPNFKSVPPNFANI 198
S S P H C PP+ S PP ++++
Sbjct: 474 SDSEPDHHCPPPHRHSPPPAYSSL 497
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,308,423
Number of Sequences: 27780
Number of extensions: 208801
Number of successful extensions: 469
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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