Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_D22
         (558 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003148-5|AAB54209.3|  792|Caenorhabditis elegans Hypothetical ...    29   1.7  
AL132895-2|CAC14404.1|  613|Caenorhabditis elegans Hypothetical ...    29   3.0  
AC084158-8|AAK68567.1|   78|Caenorhabditis elegans Hypothetical ...    29   3.0  
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p...    28   4.0  
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr...    28   4.0  
Z77661-12|CAB01191.1|  381|Caenorhabditis elegans Hypothetical p...    28   5.2  
Z77658-13|CAB01162.1|  381|Caenorhabditis elegans Hypothetical p...    28   5.2  
Z81030-14|CAJ43441.1|   75|Caenorhabditis elegans Hypothetical p...    27   6.9  
AF016682-3|AAB66186.2|  308|Caenorhabditis elegans Hypothetical ...    27   9.1  

>AF003148-5|AAB54209.3|  792|Caenorhabditis elegans Hypothetical
           protein F32B5.7 protein.
          Length = 792

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 378 VIPSTSASLNRMVIDRQPLYKEPQFSGYNVRNRDTFFNPMQSS 506
           V     A+  RM+  + PL  EP    + +R  +TF+ PMQ++
Sbjct: 62  VAAQREANFLRMIDRKAPLLYEPDVVNHALRRYETFWLPMQAA 104


>AL132895-2|CAC14404.1|  613|Caenorhabditis elegans Hypothetical
           protein Y59A8A.2 protein.
          Length = 613

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 333 YISNEWNDSENGTHDVIPSTSASLNRMVIDRQP 431
           +I +E N+S +   ++IP  S S  R V  R+P
Sbjct: 571 WICHECNESSDSEQEIIPEASESTTRSVRSRRP 603


>AC084158-8|AAK68567.1|   78|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.22 protein.
          Length = 78

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = -3

Query: 157 LYLDFISIKTIYTQTRINTIYILTY*FILQIMQKKPFNIIKTF 29
           L+++ ++   ++    ++  Y +TY  + QI+   P N + TF
Sbjct: 4   LHINLVAFLAVFVSVTVDAQYPVTYGCVAQILAYSPMNKLNTF 46


>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
           protein ZK1251.9 protein.
          Length = 1701

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -2

Query: 167 PISFVPRFYKY*NNIYTNENKHNLYINILIYFANNAKKAFQY-YQNISLVP 18
           P  F+PR Y +  +  TNE      + +L     N + A +Y  +N  LVP
Sbjct: 145 PDDFIPRLYTWAGSEGTNETLQGYAMGLLAAALENTENASKYRNENALLVP 195


>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical
           protein ZK1251.9 protein.
          Length = 1701

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -2

Query: 167 PISFVPRFYKY*NNIYTNENKHNLYINILIYFANNAKKAFQY-YQNISLVP 18
           P  F+PR Y +  +  TNE      + +L     N + A +Y  +N  LVP
Sbjct: 145 PDDFIPRLYTWAGSEGTNETLQGYAMGLLAAALENTENASKYRNENALLVP 195


>Z77661-12|CAB01191.1|  381|Caenorhabditis elegans Hypothetical
           protein F40G12.11 protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +3

Query: 339 SNEWNDSENGTHDVIPSTS 395
           +N +NDSENG+++V P+ S
Sbjct: 254 ANNFNDSENGSNEVTPNKS 272


>Z77658-13|CAB01162.1|  381|Caenorhabditis elegans Hypothetical
           protein F40G12.11 protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +3

Query: 339 SNEWNDSENGTHDVIPSTS 395
           +N +NDSENG+++V P+ S
Sbjct: 254 ANNFNDSENGSNEVTPNKS 272


>Z81030-14|CAJ43441.1|   75|Caenorhabditis elegans Hypothetical
           protein C01G10.17 protein.
          Length = 75

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 146 FYKY*NNIYTNENKHNLYINILIYFANNAKKAFQYYQN 33
           +Y Y NN Y N N +  Y     Y+ NN    + YY N
Sbjct: 23  YYYYPNNNYNNNNGYTTY----YYYPNNNNNGY-YYNN 55


>AF016682-3|AAB66186.2|  308|Caenorhabditis elegans Hypothetical
           protein T07D3.6 protein.
          Length = 308

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 80  IYFANNAKKAFQYYQNISLVPNSCK 6
           I F  + K+ F Y QN++L+PN+ +
Sbjct: 57  ICFQKSRKQKFTYSQNVTLLPNNTR 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,008,124
Number of Sequences: 27780
Number of extensions: 240077
Number of successful extensions: 625
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)