Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_D22
(558 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 27 0.13
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 25 0.39
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 25 0.39
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 25 0.39
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 25 0.39
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 25 0.39
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 25 0.39
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 25 0.39
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 25 0.39
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 25 0.39
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 25 0.39
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 25 0.39
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 25 0.52
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 24 0.91
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 24 0.91
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 2.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.7
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 22 3.7
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 3.7
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 4.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.4
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 8.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 8.4
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 27.1 bits (57), Expect = 0.13
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -2
Query: 143 YKY*NNIYTNENKHNLYINILIYFANNAKKAFQYYQNISLVP 18
Y Y NN Y N N +N Y NN KK + NI +P
Sbjct: 331 YNYNNNNYNNNNYNNNY-------NNNCKKLYYNIINIEQIP 365
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.39
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = -2
Query: 143 YKY*NNIYTNENKHN---LYINI 84
Y Y NN Y N NKHN LY NI
Sbjct: 92 YNY-NNNYNNYNKHNYNKLYYNI 113
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.39
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = -2
Query: 143 YKY*NNIYTNENKHN---LYINI 84
Y Y NN Y N NKHN LY NI
Sbjct: 92 YNY-NNNYNNYNKHNYNKLYYNI 113
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.39
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = -2
Query: 143 YKY*NNIYTNENKHN---LYINI 84
Y Y NN Y N NKHN LY NI
Sbjct: 92 YNY-NNNYNNYNKHNYNKLYYNI 113
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.39
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = -2
Query: 143 YKY*NNIYTNENKHN---LYINI 84
Y Y NN Y N NKHN LY NI
Sbjct: 92 YNY-NNNYNNYNKHNYNKLYYNI 113
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.39
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = -2
Query: 143 YKY*NNIYTNENKHN---LYINI 84
Y Y NN Y N NKHN LY NI
Sbjct: 92 YNY-NNNYNNYNKHNYNKLYYNI 113
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.39
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = -2
Query: 143 YKY*NNIYTNENKHN---LYINI 84
Y Y NN Y N NKHN LY NI
Sbjct: 92 YNY-NNNYNNYNKHNYNKLYYNI 113
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.39
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = -2
Query: 143 YKY*NNIYTNENKHN---LYINI 84
Y Y NN Y N NKHN LY NI
Sbjct: 92 YNY-NNNYNNYNKHNYNKLYYNI 113
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.39
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = -2
Query: 143 YKY*NNIYTNENKHN---LYINI 84
Y Y NN Y N NKHN LY NI
Sbjct: 92 YNY-NNNYNNYNKHNYNKLYYNI 113
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.39
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = -2
Query: 143 YKY*NNIYTNENKHN---LYINI 84
Y Y NN Y N NKHN LY NI
Sbjct: 92 YNY-NNNYNNYNKHNYNKLYYNI 113
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 25.4 bits (53), Expect = 0.39
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = -2
Query: 143 YKY*NNIYTNENKHN---LYINI 84
Y Y NN Y N NKHN LY NI
Sbjct: 325 YNY-NNNYNNYNKHNYNKLYYNI 346
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 25.4 bits (53), Expect = 0.39
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = -2
Query: 143 YKY*NNIYTNENKHN---LYINI 84
Y Y NN Y N NKHN LY NI
Sbjct: 325 YNY-NNNYNNYNKHNYNKLYYNI 346
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 25.0 bits (52), Expect = 0.52
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 164 ISFVPRFYKY*NNIYTNENKHNLYINI 84
IS + Y NN Y N N LY NI
Sbjct: 304 ISSLSNSCNYSNNYYNNNNYKKLYYNI 330
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 24.2 bits (50), Expect = 0.91
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 300 FAINHNCLHDILGNCYIGLRIGRNNCS 220
F N + LHD LG Y G+R C+
Sbjct: 97 FLQNLDALHDHLGTLYPGMRAPSFRCT 123
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 24.2 bits (50), Expect = 0.91
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 300 FAINHNCLHDILGNCYIGLRIGRNNCS 220
F N + LHD LG Y G+R C+
Sbjct: 97 FLQNLDALHDHLGTLYPGMRAPSFRCT 123
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +1
Query: 298 KTHNVMTQAIDLIFQMNGMILKMVLMMLY 384
+ H +Q ID+ ++ IL M+ ++LY
Sbjct: 353 RVHKTQSQTIDIYSRIGFPILFMLFIILY 381
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 15 IRHEGNVLIILKGFFCIICKIN 80
+ H+G+ L + G F CKI+
Sbjct: 93 VTHDGSCLYVPPGIFKSTCKID 114
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 15 IRHEGNVLIILKGFFCIICKIN 80
+ H+G+ L + G F CKI+
Sbjct: 93 VTHDGSCLYVPPGIFKSTCKID 114
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 15 IRHEGNVLIILKGFFCIICKIN 80
+ H+G+ L + G F CKI+
Sbjct: 93 VTHDGSCLYVPPGIFGSTCKID 114
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 22.2 bits (45), Expect = 3.7
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 365 WYS*CYTFNICQSQ*DGHRQTTSLQG-TSIFW 457
WYS C TFN + H T SL G ++W
Sbjct: 185 WYSQCVTFNAFPTY--THEITYSLFGMIMMYW 214
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 131 NNIYTNENKHNLYINI 84
NN Y N N LY NI
Sbjct: 315 NNNYNNYNNKKLYYNI 330
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.8 bits (44), Expect = 4.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 98 LYINILIYFANNAKKAFQYYQNISLVP 18
LY NIL YF K QY Q+ +P
Sbjct: 423 LYQNILSYFLRYKKLQPQYSQSELQMP 449
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 15 IRHEGNVLIILKGFFCIICKIN 80
+ H G+ L + G F CKI+
Sbjct: 93 VTHNGSCLYVPPGIFKSTCKID 114
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 6.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 15 IRHEGNVLIILKGFFCIICKIN 80
+ H G+ L + G F CKI+
Sbjct: 161 VTHNGSCLYVPPGIFKSTCKID 182
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 6.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 15 IRHEGNVLIILKGFFCIICKIN 80
+ H G+ L + G F CKI+
Sbjct: 161 VTHNGSCLYVPPGIFKSTCKID 182
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +3
Query: 15 IRHEGNVLIILKGFFCIICKIN 80
+ H+G+ L + G F CK++
Sbjct: 93 VTHDGSCLYVPPGIFKSTCKMD 114
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +3
Query: 15 IRHEGNVLIILKGFFCIICKIN 80
+ H+G+ L + G F CK++
Sbjct: 93 VTHDGSCLYVPPGIFKSTCKMD 114
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -2
Query: 125 IYTNENKHNLYINILIYFANNAKKAFQYYQNISLV 21
I+ N N +N N Y NN + Y NI+ +
Sbjct: 90 IHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNINYI 124
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -3
Query: 553 DSPALTQFCCDCPNSEELCIGLKN 482
D P L++ CD + ++L +GL++
Sbjct: 1880 DRPELSEAECDIDSLKKLKLGLRS 1903
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -3
Query: 553 DSPALTQFCCDCPNSEELCIGLKN 482
D P L++ CD + ++L +GL++
Sbjct: 1876 DRPELSEAECDIDSLKKLKLGLRS 1899
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,436
Number of Sequences: 438
Number of extensions: 3192
Number of successful extensions: 30
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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