Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_D21
(458 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0452 + 3198475-3198962,3199062-3199191,3199332-3199497,319... 48 3e-06
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 47 6e-06
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 42 3e-04
10_01_0066 + 848523-849269,849520-849741 30 1.0
01_01_0822 - 6401993-6402133,6402542-6402708,6402865-6402966,640... 30 1.0
09_03_0058 + 11950668-11950701,11951068-11951106,11951586-119519... 29 1.8
06_02_0041 + 10889741-10890092,10890161-10890235,10891139-108923... 29 1.8
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 29 1.8
09_01_0178 - 2548611-2548670,2549816-2549918,2549993-2550096,255... 28 3.1
12_02_0491 + 19648754-19650021,19650135-19650248,19650871-196514... 28 4.2
01_01_0347 + 2765517-2767109,2767214-2767228 27 5.5
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 27 7.3
05_06_0066 + 25307863-25307871,25308431-25308570,25308712-253087... 27 7.3
07_03_1597 + 28016737-28016771,28016881-28017742 27 9.6
07_01_0353 + 2563807-2564496,2564595-2564660,2564853-2564918,256... 27 9.6
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 27 9.6
04_03_0433 + 15878709-15878798,15879271-15879336,15880608-158807... 27 9.6
02_04_0298 - 21733620-21733805,21733900-21734025,21734128-217342... 27 9.6
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 27 9.6
>06_01_0452 +
3198475-3198962,3199062-3199191,3199332-3199497,
3199765-3199883,3200056-3200136,3200236-3200322,
3200644-3200715,3200791-3200859,3201349-3201426,
3201540-3201680,3202333-3202386,3202465-3202581
Length = 533
Score = 48.4 bits (110), Expect = 3e-06
Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +3
Query: 21 LEAKEGDVVLFKNFEENRVKYDGEAFDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIK 200
+ ++E + L K+ E K++G AF+E +V + P+I F+ + K++G IK
Sbjct: 241 IASEEQFLGLVKSEPEKFEKFNG-AFEEKEIIQFVELNKFPLITVFTDLNSGKVYGSPIK 299
Query: 201 YHLLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAID-ADEDEHQRILEFFGMKKEE 371
L +F +A FE ++ VA+ ++ K+M + +D A+E + L +G++ E+
Sbjct: 300 --LQVFTFAEAYDFEDLESMIQEVARGFKTKIMLIYVDTAEEKLAKPFLTLYGLEPEK 355
>02_04_0214 -
20976977-20977171,20977499-20977611,20978041-20978158,
20978585-20978701,20978836-20978973,20979193-20979318,
20979827-20980015,20980539-20980863,20980977-20981134
Length = 492
Score = 47.2 bits (107), Expect = 6e-06
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 7/138 (5%)
Frame = +3
Query: 42 VVLFKNFEENRVKYDGEAFDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYH----- 206
V LFK F+E V D + FD D + ++ P +V F A++ + +KY
Sbjct: 210 VRLFKPFDELFV--DSQDFDRDALEKFIESSGFPTVVTFDTSPANQKY--LLKYFDNAGT 265
Query: 207 -LLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAA 383
+LFLS D E++ + A Y ++ I D Q ++FG+K+ EVP
Sbjct: 266 KAMLFLSFSDDRAEEFRTQFHEAANQYSANNISFLI-GDVTASQGAFQYFGLKESEVPLV 324
Query: 384 RLIALEQDMAKY-KPTTD 434
++A +KY KPT +
Sbjct: 325 FILA---SKSKYIKPTVE 339
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 41.5 bits (93), Expect = 3e-04
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Frame = +3
Query: 42 VVLFKNFEENRVKYDGEAFDEDLFKSWVFVQSMPVIVEF-----SHETASKIFGGQIKYH 206
V LFK F+E V D + FD + ++ S P +V F +H K F
Sbjct: 223 VRLFKPFDELVV--DSKDFDVTALEKFIDASSTPKVVTFDKNPDNHPYLLKFFQSSAA-K 279
Query: 207 LLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVP 377
+LFL+ FE + A+ ++DK + I D + Q ++FG+++++VP
Sbjct: 280 AMLFLNFSTGPFESFKSVYYGAAEEFKDKEIKFLI-GDIEASQGAFQYFGLREDQVP 335
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 30 KEGDVVLFKNFEENRVKYDGEAFDEDL 110
++GDV+L K + ENR+K + + FD +L
Sbjct: 257 EQGDVLLVKTYNENRMKENLDIFDWEL 283
>01_01_0822 -
6401993-6402133,6402542-6402708,6402865-6402966,
6403437-6403577,6403685-6403768,6403858-6404164,
6404286-6404357
Length = 337
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 234 DTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRI 341
D FE+ V+ + KNY D + A++ ED H+R+
Sbjct: 13 DKFEENVKRFIELPKNYLDTAVDTAVEFMEDIHERM 48
>09_03_0058 +
11950668-11950701,11951068-11951106,11951586-11951982,
11952016-11952314,11953743-11956795
Length = 1273
Score = 29.1 bits (62), Expect = 1.8
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = +3
Query: 162 HETASKIFGGQIKYHLLLFLSKKADTFEKYVEELKPVAK-----NYRDKLMTVAIDADED 326
HE +K+ G I +H+ + K D + +E L + + R + + +I+ ++D
Sbjct: 359 HELQNKVEGHAILFHVQDYHETKIDKIQGKLEHLVRQMEQLGLYDERQQFIIESINREDD 418
Query: 327 EHQRILEFFGMKKEEVPAARLIALEQDMAKYKPTTD 434
FG +KE LI L+++ K T+
Sbjct: 419 LFGEEQTIFGRQKEMSELIELIVLQENSPTDKQVTE 454
>06_02_0041 + 10889741-10890092,10890161-10890235,10891139-10892341,
10892970-10893253,10893343-10893459,10894126-10894388,
10894557-10894725,10894838-10895110,10895674-10895718,
10896472-10896591,10896926-10896987,10897296-10897318,
10897911-10898128
Length = 1067
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 449 VSAKLIGGRFVLSHVLFESDQSGRWNFFLLHAEEL 345
++ + + RF + +LF+ D S W F +LH EL
Sbjct: 964 IAQEFLNKRFGILPILFKIDHSKLWGFKILHCLEL 998
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 129 VQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVEELKPVAKN 281
V+ MP E ++E+ KIF + YHL D F Y+E L+ + K+
Sbjct: 753 VKVMPDAREIANESGVKIFVADVIYHLF-------DQFTTYIEGLREIEKD 796
>09_01_0178 -
2548611-2548670,2549816-2549918,2549993-2550096,
2550893-2550988,2551418-2551482,2551558-2551591,
2552469-2552540,2552567-2552644,2553416-2553477,
2554267-2554530,2555057-2555246,2555432-2555500,
2555613-2555669,2555746-2555846,2556029-2556146,
2556225-2556272,2556362-2556487,2556960-2557118,
2558119-2558216,2558324-2558416,2559741-2559937,
2560231-2560354,2561121-2561334,2561773-2561830,
2561955-2562433
Length = 1022
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 288 DKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAK 416
DK+ + +D DED R+L + KK P+ +LE ++AK
Sbjct: 652 DKIHLMLLDEDEDPCIRLLSY--CKKHRQPSTERPSLESNLAK 692
>12_02_0491 +
19648754-19650021,19650135-19650248,19650871-19651427,
19651446-19651529,19651566-19651783,19652004-19652309
Length = 848
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 142 GMLWTNTHDLNKSSSNASPSYLTRFSSKFLNSTTSPSLAS 23
GML T T D++ + + SPS L R ++ T+P+ S
Sbjct: 763 GMLLTTTVDMSGVTVHVSPSSLRRRGRGLMSGVTAPARGS 802
>01_01_0347 + 2765517-2767109,2767214-2767228
Length = 535
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = -2
Query: 190 PPKILDAVSWENSTMTGMLWTNTHDLNKSSSNASPSYLTRFSSKFLNSTTSPSLASNSDV 11
PP+ D SW N T L+ ++ S S+ + LN +T PS D+
Sbjct: 295 PPEASDFESWRNLPSTDFELDRPLPLSSKITHGSHSHKKALNGSGLNLSTPPSSDDGMDL 354
Query: 10 T 8
+
Sbjct: 355 S 355
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 27.1 bits (57), Expect = 7.3
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +3
Query: 30 KEGDVVLFKNFEENRVKYDGEAFDEDL 110
++GD ++ K+F E R++ + E FD +L
Sbjct: 269 EQGDCIIVKSFNERRMRENLEIFDWEL 295
>05_06_0066 +
25307863-25307871,25308431-25308570,25308712-25308754,
25308994-25310022
Length = 406
Score = 27.1 bits (57), Expect = 7.3
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +3
Query: 282 YRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVE 458
Y K +A+DA+ D+ + L GM+ +E+ A+L + + D+A + EL A E
Sbjct: 218 YELKAKLIAMDAEADDLRASLATKGMEIDEL-RAKLTSKDADIAAVEADNAELMKMAEE 275
>07_03_1597 + 28016737-28016771,28016881-28017742
Length = 298
Score = 26.6 bits (56), Expect = 9.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 458 LNSVSAKLIGGRFVLSHVLFESDQSGR 378
LN+ + KL+ G+ + +HV F S R
Sbjct: 3 LNAAAKKLVRGKSIAAHVFFSSSSRSR 29
>07_01_0353 +
2563807-2564496,2564595-2564660,2564853-2564918,
2565044-2565115,2565196-2565261,2565355-2565417,
2565505-2565570,2565963-2566062,2567403-2567504,
2567772-2567995,2568200-2568314,2568653-2568763,
2568873-2569088,2569426-2569624,2570690-2570790,
2570872-2570919,2571052-2571236,2571345-2571462,
2571572-2571699,2571981-2572107,2572529-2572647,
2572770-2572938,2573078-2573162,2573247-2573320,
2573449-2573568,2574068-2574251,2574343-2574464,
2574548-2574755,2574885-2574958,2575047-2575185,
2575275-2575456,2575852-2576007,2576153-2576284,
2576508-2576566,2576913-2576945,2577065-2577196,
2577303-2577479
Length = 1675
Score = 26.6 bits (56), Expect = 9.6
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2
Query: 106 SSSNASPSYLTRFSSKFLNSTTSPSLASN 20
SSS+AS S+ S+ LNS SPS+ S+
Sbjct: 154 SSSSASSSFRRAASNATLNSPRSPSVTSS 182
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 207 LLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADE 323
+LLFL + D F+ Y EEL+ ++ RD + V DE
Sbjct: 85 ILLFLHRVVDVFKHYFEELE--EESLRDNFVVVYELLDE 121
>04_03_0433 +
15878709-15878798,15879271-15879336,15880608-15880743,
15880813-15880900,15881674-15881826,15882214-15882376,
15882446-15882630,15882696-15882869,15883222-15883367,
15883498-15883621,15883702-15883882,15884986-15885145,
15885235-15885276,15885349-15885467,15885548-15885746,
15886263-15886394,15887546-15887649,15887750-15887929,
15888202-15888249
Length = 829
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 42 VVLFKNFEENRVKYDGEAFDEDLFKSW 122
++LF N E V +G+ D D KSW
Sbjct: 249 MILFLNLLERPVPVEGQPLDPDARKSW 275
>02_04_0298 -
21733620-21733805,21733900-21734025,21734128-21734213,
21734751-21734866,21734951-21735628,21736080-21736105
Length = 405
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 335 ENPRVLRHEEGRSSSGQTDR 394
E PRVLRH +S QTD+
Sbjct: 97 EVPRVLRHHNSKSRDEQTDK 116
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 207 LLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADE 323
+LLFL + D F+ Y EEL+ ++ RD + V DE
Sbjct: 84 ILLFLHRVVDVFKHYFEELE--EESLRDNFVVVYELLDE 120
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,708,080
Number of Sequences: 37544
Number of extensions: 217785
Number of successful extensions: 725
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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