Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_D18
         (569 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   0.92 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   0.92 
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    24   1.2  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   2.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   4.9  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   6.5  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 237 RLENSFLTNKSKFSKFGDAPLRLFRLNAIHCSIRD 133
           RL+N   TN S  SK  D  +   R+N++  S  D
Sbjct: 207 RLQNRLYTNDSTSSKTDDDSIDFDRMNSLGLSWLD 241


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 237 RLENSFLTNKSKFSKFGDAPLRLFRLNAIHCSIRD 133
           RL+N   TN S  SK  D  +   R+N++  S  D
Sbjct: 245 RLQNRLYTNDSTSSKTDDDSIDFDRMNSLGLSWLD 279


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/38 (26%), Positives = 23/38 (60%)
 Frame = +3

Query: 321 QHNQTMKSYQIIWLLHQRELKLKTNRLHKMNYAHLLTR 434
           Q+ +T+++   + ++H  +   K NR+H+MN  + + R
Sbjct: 347 QNEETLQTVVAMKMMHLPQSN-KMNRMHRMNRVNRVNR 383



 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +3

Query: 387 KTNRLHKMNYAHLLTRQQLFQLNMRLE 467
           +TNR+ +MN  +    + +  L+M+L+
Sbjct: 527 RTNRMDRMNRMNRQMNEYMMALSMKLQ 553


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 149 WIAFSLNNLNGASPNLENLDLFVRKEF 229
           WI   + N++  SP+  N+  +VR+ F
Sbjct: 328 WITVCVLNVHFRSPSTHNMSPWVRQVF 354


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 518 LVVTSHRHTNELPYPC 471
           LV+    HT E PY C
Sbjct: 191 LVIHMRTHTGEKPYVC 206



 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 518 LVVTSHRHTNELPYPC 471
           L V +  HT E PY C
Sbjct: 219 LKVHTRTHTGEKPYTC 234


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +2

Query: 59  LGIDVQKEVLRKCVSLCEEYDVDAESLIEQWIAFSLNNLNGAS 187
           LG++ QK  L++C    E+ D D  + + Q+   + N+  G +
Sbjct: 508 LGVEFQKIELKQCDEFVEDSD-DYWNCVIQYNTRAENHQTGTA 549


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,844
Number of Sequences: 438
Number of extensions: 3301
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)