Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_D17
(628 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0745 + 27716622-27717017 33 0.14
04_04_0962 + 29728983-29729034,29729622-29731369,29731656-297317... 30 1.7
04_01_0187 - 2153546-2154520,2154581-2155858 30 1.7
07_01_0040 + 325737-328181 29 3.0
03_01_0330 + 2566662-2566740,2566821-2566911,2567003-2567057,256... 29 3.0
08_02_0235 + 14627648-14628889 29 4.0
05_05_0080 - 22243175-22243226,22243342-22243389,22243485-222435... 29 4.0
04_04_0744 + 27713422-27713814 29 4.0
01_05_0626 + 23797278-23797618,23797629-23798097 29 4.0
04_03_0573 + 17329365-17330440,17330505-17331201 28 5.3
03_01_0022 + 189525-189551,189600-189950 28 5.3
01_07_0025 + 40565296-40565497,40565591-40566075 28 5.3
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 28 7.0
10_08_0432 - 17875427-17875807,17877810-17879099 28 7.0
07_03_0180 + 14804784-14805231,14806855-14806892,14807135-14807143 28 7.0
07_01_0282 - 2070027-2070041,2074763-2075062,2075154-2075722,207... 28 7.0
04_04_1624 - 34849385-34849410,34849748-34851052,34852121-348522... 28 7.0
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622... 28 7.0
09_03_0137 + 12667763-12667930,12668715-12668779,12668879-126689... 27 9.2
09_02_0555 - 10588685-10592038 27 9.2
09_01_0008 - 233137-233279,233712-233827,235376-235720,236218-23... 27 9.2
04_03_0744 + 19237901-19237912,19238119-19238611,19238860-192389... 27 9.2
02_03_0344 + 17967687-17968309,17968402-17968744,17970285-179704... 27 9.2
02_03_0343 + 17961977-17962596,17962670-17963015,17965933-179662... 27 9.2
02_02_0616 - 12160899-12161506,12161698-12161821,12161974-121620... 27 9.2
>04_04_0745 + 27716622-27717017
Length = 131
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 428 HTAHPTPPTSRDPVEESGSRTFIDRNGLRGGWCSNTIIVVRARASHPRCRARRPLPRG 601
H PTPPT P + R+ L+ G C+N + +++A+ P PL G
Sbjct: 27 HCPTPTPPTPSTPTPTPAAFGKCPRDALKLGVCANVLGLIKAKVGVPPAEPCCPLLEG 84
>04_04_0962 + 29728983-29729034,29729622-29731369,29731656-29731742,
29732035-29732199,29732437-29732526,29732863-29733027,
29733124-29733418,29733550-29733764,29733879-29733947,
29734107-29734184,29734466-29734529,29734658-29734897,
29734985-29735124
Length = 1135
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 355 VSIDR-LKPAYLLSESPTLQGATKPPHSAPDSTYVTRSGRRVRFQD 489
+S++R L+ L SE+PT+ +KPP + P+ ++ S VR+ +
Sbjct: 899 ISVERILQYTKLPSEAPTITEGSKPPMAWPEFGMISISNLEVRYAE 944
>04_01_0187 - 2153546-2154520,2154581-2155858
Length = 750
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +1
Query: 259 KRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV-SIDRLKPAYLLSESPTLQGATKPPH 432
K L P + GPYK++S R + +Q+++ + V ++ + PT + +
Sbjct: 667 KGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANLEQIE 726
Query: 433 SAPDSTYVTRSGR 471
D TYV R R
Sbjct: 727 VQEDLTYVERPTR 739
>07_01_0040 + 325737-328181
Length = 814
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 507 VSGGAGVATRSSSSAPAHLIRGVG 578
+SGG G ++ SSSS+ +HL GVG
Sbjct: 74 ISGGNGSSSSSSSSSISHLSAGVG 97
>03_01_0330 + 2566662-2566740,2566821-2566911,2567003-2567057,
2567166-2567297,2567517-2567567,2567769-2567840,
2568590-2568680,2568988-2569066,2569147-2569210,
2569917-2570020,2570182-2570287,2572080-2572157,
2572649-2572801,2573039-2573128,2573284-2573349,
2573485-2573583,2573660-2573734,2574455-2574514,
2574909-2574998,2575202-2575323,2575462-2575591,
2575662-2575741,2576167-2576302,2577005-2577086,
2578475-2578620,2578796-2578876,2578994-2579094,
2579770-2580008,2580100-2580209,2580518-2580646,
2580728-2580802,2581455-2581586,2582298-2582470,
2582566-2582688,2582771-2582831,2582910-2583005,
2583251-2583351,2584014-2584119,2584673-2584786,
2584888-2584962,2585619-2585711,2585883-2585954,
2586253-2586338,2586434-2586527,2586596-2586703,
2586782-2587021
Length = 1579
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 112 TDYSDFLSRLRRHICNLKPTTVTRHGKSNI 201
+DY DF+ L R +C L P V + +S I
Sbjct: 1434 SDYEDFIRDLTRQLCRLSPARVDSYFESAI 1463
>08_02_0235 + 14627648-14628889
Length = 413
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 256 LKRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV-SIDRLKPAYLLSESPTLQGATKPP 429
+K L P + GPYK++S R + +Q+++ + V ++ + PT + +
Sbjct: 283 IKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANLEQI 342
Query: 430 HSAPDSTYVTR 462
D TYV +
Sbjct: 343 EVQEDLTYVEK 353
>05_05_0080 -
22243175-22243226,22243342-22243389,22243485-22243540,
22243752-22243819,22244712-22244773,22245166-22245214,
22245818-22245899,22245987-22246064,22246441-22246499,
22246727-22246805,22246946-22247218
Length = 301
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 552 ARTTMIVLLHQPPRRPLRSIKVLEPDSSTGSRDVGGVG 439
A ++ L+ + PR PL + + PD++TG+R G
Sbjct: 51 ATAPILRLVQRRPRAPLTAARAASPDAATGARSPSSGG 88
>04_04_0744 + 27713422-27713814
Length = 130
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +2
Query: 440 PTPPTSRDPVEESGSRTFIDRNGLRGGWCSNTIIVVRARASHPRCRARRPLPRG 601
PTP T P + R+ L+ G C+N + +++A+ P PL G
Sbjct: 31 PTPSTPSTPTPTPAAFGKCPRDALKLGVCANVLGLIKAKVGVPPAEPCCPLLEG 84
>01_05_0626 + 23797278-23797618,23797629-23798097
Length = 269
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 194 DFPCRVTVVGFKLQMWRRRRDKKSL 120
D PC V VVG + +W R+ D+K +
Sbjct: 216 DVPCIVCVVGTTVSVWMRKFDEKGV 240
>04_03_0573 + 17329365-17330440,17330505-17331201
Length = 590
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -1
Query: 628 SAIVGGSRLATRQRSSRPTPRMRCAGADDDDRVATPAPPETVTVD 494
+A+ G ++ R S PR+ C G +D ++T V VD
Sbjct: 83 AAVAAGRKVKVATRYSNSFPRLACPGGEDGTVISTRWLDRAVRVD 127
>03_01_0022 + 189525-189551,189600-189950
Length = 125
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +2
Query: 440 PTPPTSRDPVEESGSRTFIDRNGLRGGWCSNTIIVVRARASHPRCRARRPLPRG 601
PTPP + P SG + L+ G C+N + +++ + P PL G
Sbjct: 23 PTPPVTPPPSPPSGGGNKCPIDALKLGVCANVLNLLKLKVGVPASEECCPLLGG 76
>01_07_0025 + 40565296-40565497,40565591-40566075
Length = 228
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 586 SSRPTPRMRCAGADDDDRVATPA 518
S R PR R A ADDDD ++P+
Sbjct: 179 SIRGAPRRRAAAADDDDMPSSPS 201
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 259 KRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV-SIDRLKPAYLLSESPTLQGATKPPH 432
K L P + GPYK++S R + +Q+++ + V ++ + PT + +
Sbjct: 452 KGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANLEQIE 511
Query: 433 SAPDSTYVTR 462
D TYV +
Sbjct: 512 VQEDLTYVEK 521
>10_08_0432 - 17875427-17875807,17877810-17879099
Length = 556
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 604 LATRQRSSRPTPRMRCAGADDDDRVATP 521
+ +RSS P P + GAD+DD V P
Sbjct: 374 IVAARRSSPPAPAVAANGADEDDLVFHP 401
>07_03_0180 +
14804784-14805231,14806855-14806892,14807135-14807143
Length = 164
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 4 RGAWKEDIGSSSAELVYGETLKLP 75
R A+K IG S +LVYG+T LP
Sbjct: 17 RTAYKMPIGMSPYQLVYGKTCHLP 40
>07_01_0282 -
2070027-2070041,2074763-2075062,2075154-2075722,
2075812-2076337
Length = 469
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 619 VGGSRLATRQRSSRPTPRMRCAGADDDDRVATPAPP 512
VG + +QRS P+ R A A D D P PP
Sbjct: 395 VGNMQQQQQQRSMTPSASSRAAAATDADGEDPPPPP 430
>04_04_1624 -
34849385-34849410,34849748-34851052,34852121-34852294,
34852386-34852456,34852563-34852618,34853047-34853185,
34853310-34853695,34853801-34853851,34853936-34854021,
34854112-34854553,34856241-34856315,34856457-34856593,
34856679-34856838,34856917-34857012,34857093-34857247,
34857900-34858032
Length = 1163
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -3
Query: 479 LTLLPDR-VT*VESGALCGGFVAPCSVGDSLSK*AGLSLSMETV 351
+T LPDR V+ S LC G +APCS + L S ++
Sbjct: 254 MTSLPDRGVSSSSSDPLCEGNIAPCSSSSEQKEDCSLKQSKTSI 297
>03_05_1065 +
30061588-30061883,30061995-30062056,30062196-30062276,
30062391-30062464,30062547-30062629,30063044-30063147,
30063526-30063665,30063736-30063783,30063939-30063991,
30064178-30064262,30064346-30064412,30064496-30064606,
30065262-30065283,30066244-30071110,30071186-30071374,
30071463-30071577,30072329-30073388,30074247-30074694,
30074966-30075019,30075105-30076898,30076989-30077949,
30078271-30078384,30078459-30078613,30078934-30079026,
30079341-30079613,30093423-30093975,30094465-30094540,
30094619-30094718
Length = 4025
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 58 ETLKLPSDFFLASSVAEVTDYSDFLSRLRRH 150
+ L L + AS+V + D+S FLSRLR H
Sbjct: 698 QVLSLQNLGLRASAVEALLDFSSFLSRLRLH 728
>09_03_0137 +
12667763-12667930,12668715-12668779,12668879-12668954,
12669142-12669339,12669716-12669795,12670670-12670913,
12671061-12671162,12671243-12671305,12671550-12671627,
12671905-12671967,12672163-12672209,12672328-12672496
Length = 450
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 595 RQRSSRPTPRMRCAGADDDDRVATPAPPETVTVDKSPGT*LFYRIA 458
R+ SSR + R D DD + PAP V K G ++YR A
Sbjct: 7 RRPSSRTSSTAR--PVDGDDVIEAPAPRPVAGVKKHIGLHVYYRFA 50
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 259 KRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV-SIDRLKPAYLLSESPTLQGATKPPH 432
K L P Y GP+++I+ R + +Q+++ + V + + P+ Q ++
Sbjct: 988 KGKLAPRYVGPFRIIARRGEVAYQLELPASLGNVHDVFHVSQLKKCLRVPSEQADSEQIE 1047
Query: 433 SAPDSTYVTR 462
D TYV R
Sbjct: 1048 VREDLTYVER 1057
>09_01_0008 -
233137-233279,233712-233827,235376-235720,236218-236292,
236508-236636,237516-237589,237836-237968,239366-239584,
239671-239756,239843-241107,241304-241640,242548-242862,
243614-243697,243776-243883,243981-244079
Length = 1175
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -2
Query: 618 WAVRDWP--RGKGRLARHLG*DARARTTMI---VLLHQPPRRPLRSIKVLEPDSSTG 463
W + W RGK R +G A + I + +HQ PR PL + + DSSTG
Sbjct: 24 WERKYWSCSRGKDRYPYPVGYHAVRHFSGISYTMQIHQGPRGPLFQVTSTQGDSSTG 80
>04_03_0744 +
19237901-19237912,19238119-19238611,19238860-19238928,
19239124-19239140,19239260-19239357,19240019-19240156,
19240710-19240899,19241175-19241307,19241505-19242442
Length = 695
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 533 TIIVVRARASHPRCRARRPLPR 598
T I+ RAR H RCR RRP R
Sbjct: 19 TKILSRARQIHRRCRRRRPRRR 40
>02_03_0344 +
17967687-17968309,17968402-17968744,17970285-17970410,
17970458-17970642,17970721-17970973
Length = 509
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 456 DVGGVGCAVWRLRGSLQR 403
DVGGVG +WRLR S R
Sbjct: 249 DVGGVGRRLWRLRESRTR 266
>02_03_0343 +
17961977-17962596,17962670-17963015,17965933-17966291,
17966384-17966636
Length = 525
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 456 DVGGVGCAVWRLRGSLQR 403
DVGGVG +WRLR S R
Sbjct: 248 DVGGVGRRLWRLRESRTR 265
>02_02_0616 -
12160899-12161506,12161698-12161821,12161974-12162083,
12162119-12162271,12162545-12162779
Length = 409
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 454 VTRSGRRVRFQDFYRP 501
+T+ GRR+ F+DF RP
Sbjct: 323 ITKDGRRIEFRDFTRP 338
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,755,604
Number of Sequences: 37544
Number of extensions: 405620
Number of successful extensions: 1600
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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