Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_D17
(628 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035077-1|AAH35077.1| 804|Homo sapiens SET and MYND domain con... 30 5.8
AK092149-1|BAC03817.1| 351|Homo sapiens protein ( Homo sapiens ... 30 5.8
AK057769-1|BAB71564.1| 313|Homo sapiens protein ( Homo sapiens ... 30 5.8
U12255-1|AAA58958.1| 365|Homo sapiens hFcRn protein. 30 7.7
EF064735-1|ABK41918.1| 365|Homo sapiens Fc fragment of IgG, rec... 30 7.7
BT006828-1|AAP35474.1| 365|Homo sapiens Fc fragment of IgG, rec... 30 7.7
BC067128-1|AAH67128.1| 1189|Homo sapiens hairless homolog (mouse... 30 7.7
BC008734-1|AAH08734.1| 365|Homo sapiens Fc fragment of IgG, rec... 30 7.7
AY739714-1|AAW65983.1| 1224|Homo sapiens HECTD1 protein. 30 7.7
AY254380-1|AAP13073.1| 2612|Homo sapiens E3 ligase for inhibin r... 30 7.7
AL110222-1|CAB53681.1| 959|Homo sapiens hypothetical protein pr... 30 7.7
AJ277249-1|CAB87577.2| 1189|Homo sapiens hairless protein protein. 30 7.7
AJ277165-1|CAB86602.1| 1189|Homo sapiens hairless protein protein. 30 7.7
AF220542-1|AAF72596.1| 365|Homo sapiens FcRN protein protein. 30 7.7
AF200220-1|AAG31421.1| 362|Homo sapiens FcRn alpha chain protein. 30 7.7
AF039196-1|AAC32258.3| 1189|Homo sapiens putative single zinc fi... 30 7.7
AB032957-1|BAA86445.2| 2168|Homo sapiens KIAA1131 protein protein. 30 7.7
>BC035077-1|AAH35077.1| 804|Homo sapiens SET and MYND domain
containing 4 protein.
Length = 804
Score = 30.3 bits (65), Expect = 5.8
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +1
Query: 88 LASSVAEVTDYSDFLSRLRRHICNLKPTTVTRHGKSNIFVHKDLQKSSQVFLRTDALKRA 267
LA + A + D+ + L+R +C ++ RHG S++ + +L K +Q+F A+ A
Sbjct: 705 LARACAALGDWQKSATHLQRSLCVVE----VRHGPSSVEMGHELFKLAQIFFNGFAVPEA 760
Query: 268 L 270
L
Sbjct: 761 L 761
>AK092149-1|BAC03817.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ34830 fis, clone NT2NE2009523, weakly similar to
Homo sapiens HSKM-B (HSKM-B) mRNA. ).
Length = 351
Score = 30.3 bits (65), Expect = 5.8
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +1
Query: 88 LASSVAEVTDYSDFLSRLRRHICNLKPTTVTRHGKSNIFVHKDLQKSSQVFLRTDALKRA 267
LA + A + D+ + L+R +C ++ RHG S++ + +L K +Q+F A+ A
Sbjct: 214 LARACAALGDWQKSATHLQRSLCVVE----VRHGPSSVEMGHELFKLAQIFFNGFAVPEA 269
Query: 268 L 270
L
Sbjct: 270 L 270
>AK057769-1|BAB71564.1| 313|Homo sapiens protein ( Homo sapiens
cDNA FLJ25040 fis, clone CBL03111. ).
Length = 313
Score = 30.3 bits (65), Expect = 5.8
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +1
Query: 88 LASSVAEVTDYSDFLSRLRRHICNLKPTTVTRHGKSNIFVHKDLQKSSQVFLRTDALKRA 267
LA + A + D+ + L+R +C ++ RHG S++ + +L K +Q+F A+ A
Sbjct: 214 LARACAALGDWQKSATHLQRSLCVVE----VRHGPSSVEMGHELFKLAQIFFNGFAVPEA 269
Query: 268 L 270
L
Sbjct: 270 L 270
>U12255-1|AAA58958.1| 365|Homo sapiens hFcRn protein.
Length = 365
Score = 29.9 bits (64), Expect = 7.7
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -1
Query: 628 SAIVGGSRLATRQRSSRPTPRMRCAGADDDDRVATPAPPETVTVD 494
+A VGG+ L R RS P P + G DD V P P E D
Sbjct: 312 AAAVGGALLWRRMRSGLPAPWISLRG--DDTGVLLPTPGEAQDAD 354
>EF064735-1|ABK41918.1| 365|Homo sapiens Fc fragment of IgG,
receptor, transporter, alpha protein.
Length = 365
Score = 29.9 bits (64), Expect = 7.7
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -1
Query: 628 SAIVGGSRLATRQRSSRPTPRMRCAGADDDDRVATPAPPETVTVD 494
+A VGG+ L R RS P P + G DD V P P E D
Sbjct: 312 AAAVGGALLWRRMRSGLPAPWISLRG--DDTGVLLPTPGEAQDAD 354
>BT006828-1|AAP35474.1| 365|Homo sapiens Fc fragment of IgG,
receptor, transporter, alpha protein.
Length = 365
Score = 29.9 bits (64), Expect = 7.7
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -1
Query: 628 SAIVGGSRLATRQRSSRPTPRMRCAGADDDDRVATPAPPETVTVD 494
+A VGG+ L R RS P P + G DD V P P E D
Sbjct: 312 AAAVGGALLWRRMRSGLPAPWISLRG--DDTGVLLPTPGEAQDAD 354
>BC067128-1|AAH67128.1| 1189|Homo sapiens hairless homolog (mouse)
protein.
Length = 1189
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 516 GAGVATRSSSSAPAHLIRGVGRDDLCRVASREPPTIA 626
G+G +R S+ HL+ G+G D LCR+ RE +A
Sbjct: 543 GSGPDSRLSTGLAKHLLSGLG-DRLCRLLRREREALA 578
>BC008734-1|AAH08734.1| 365|Homo sapiens Fc fragment of IgG,
receptor, transporter, alpha protein.
Length = 365
Score = 29.9 bits (64), Expect = 7.7
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -1
Query: 628 SAIVGGSRLATRQRSSRPTPRMRCAGADDDDRVATPAPPETVTVD 494
+A VGG+ L R RS P P + G DD V P P E D
Sbjct: 312 AAAVGGALLWRRMRSGLPAPWISLRG--DDTGVLLPTPGEAQDAD 354
>AY739714-1|AAW65983.1| 1224|Homo sapiens HECTD1 protein.
Length = 1224
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 202 FVHKDLQKSSQVFLRTDALKRALQPPYTGPYKVISRSDK 318
+V K LQ S +++D L+R +P YT Y+ + SDK
Sbjct: 460 YVQKLLQLSCNGNVKSDKLRRIWEPTYTIMYREMKDSDK 498
>AY254380-1|AAP13073.1| 2612|Homo sapiens E3 ligase for inhibin
receptor protein.
Length = 2612
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 202 FVHKDLQKSSQVFLRTDALKRALQPPYTGPYKVISRSDK 318
+V K LQ S +++D L+R +P YT Y+ + SDK
Sbjct: 1848 YVQKLLQLSCNGNVKSDKLRRIWEPTYTIMYREMKDSDK 1886
>AL110222-1|CAB53681.1| 959|Homo sapiens hypothetical protein
protein.
Length = 959
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 202 FVHKDLQKSSQVFLRTDALKRALQPPYTGPYKVISRSDK 318
+V K LQ S +++D L+R +P YT Y+ + SDK
Sbjct: 195 YVQKLLQLSCNGNVKSDKLRRIWEPTYTIMYREMKDSDK 233
>AJ277249-1|CAB87577.2| 1189|Homo sapiens hairless protein protein.
Length = 1189
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 516 GAGVATRSSSSAPAHLIRGVGRDDLCRVASREPPTIA 626
G+G +R S+ HL+ G+G D LCR+ RE +A
Sbjct: 543 GSGPDSRLSTGLAKHLLSGLG-DRLCRLLRREREALA 578
>AJ277165-1|CAB86602.1| 1189|Homo sapiens hairless protein protein.
Length = 1189
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 516 GAGVATRSSSSAPAHLIRGVGRDDLCRVASREPPTIA 626
G+G +R S+ HL+ G+G D LCR+ RE +A
Sbjct: 543 GSGPDSRLSTGLAKHLLSGLG-DRLCRLLRREREALA 578
>AF220542-1|AAF72596.1| 365|Homo sapiens FcRN protein protein.
Length = 365
Score = 29.9 bits (64), Expect = 7.7
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -1
Query: 628 SAIVGGSRLATRQRSSRPTPRMRCAGADDDDRVATPAPPETVTVD 494
+A VGG+ L R RS P P + G DD V P P E D
Sbjct: 312 AAAVGGALLWRRMRSGLPAPWISLRG--DDTGVLLPTPGEAQDAD 354
>AF200220-1|AAG31421.1| 362|Homo sapiens FcRn alpha chain protein.
Length = 362
Score = 29.9 bits (64), Expect = 7.7
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -1
Query: 628 SAIVGGSRLATRQRSSRPTPRMRCAGADDDDRVATPAPPETVTVD 494
+A VGG+ L R RS P P + G DD V P P E D
Sbjct: 309 AAAVGGALLWRRMRSGLPAPWISLRG--DDTGVLLPTPGEAQDAD 351
>AF039196-1|AAC32258.3| 1189|Homo sapiens putative single zinc
finger transcription factor protein protein.
Length = 1189
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 516 GAGVATRSSSSAPAHLIRGVGRDDLCRVASREPPTIA 626
G+G +R S+ HL+ G+G D LCR+ RE +A
Sbjct: 543 GSGPDSRLSTGLAKHLLSGLG-DRLCRLLRREREALA 578
>AB032957-1|BAA86445.2| 2168|Homo sapiens KIAA1131 protein protein.
Length = 2168
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 202 FVHKDLQKSSQVFLRTDALKRALQPPYTGPYKVISRSDK 318
+V K LQ S +++D L+R +P YT Y+ + SDK
Sbjct: 1404 YVQKLLQLSCNGNVKSDKLRRIWEPTYTIMYREMKDSDK 1442
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,167,112
Number of Sequences: 237096
Number of extensions: 1994477
Number of successful extensions: 5939
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5913
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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