Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_D16
(484 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 171 6e-44
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 171 6e-44
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 101 8e-23
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 99 2e-22
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 91 6e-20
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 91 1e-19
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 90 2e-19
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 88 8e-19
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 82 5e-17
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 81 1e-16
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 79 3e-16
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 75 7e-15
SPAC25A8.01c ||snf2SR|fun thirty related protein Fft3|Schizosacc... 74 1e-14
SPBC582.10c |||ATP-dependent DNA helicase Rhp16b |Schizosaccharo... 66 3e-12
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 61 1e-10
SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyc... 61 1e-10
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 60 2e-10
SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase Rdh54... 59 3e-10
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 55 6e-09
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 31 0.091
SPAC25H1.02 |jmj1||Jmj1 protein|Schizosaccharomyces pombe|chr 1|... 27 1.1
SPCC16C4.17 |mug123||meiotically upregulated gene Mug123|Schizos... 27 1.5
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 26 2.6
SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr 3... 26 2.6
SPAC57A7.10c |sec21||coatomer gamma subunit Sec21 |Schizosacchar... 26 3.4
SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomy... 25 4.5
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 25 4.5
SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subuni... 25 6.0
SPBC651.12c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 6.0
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 25 6.0
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 25 7.9
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 25 7.9
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 171 bits (415), Expect = 6e-44
Identities = 88/159 (55%), Positives = 111/159 (69%), Gaps = 7/159 (4%)
Frame = +1
Query: 10 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 189
AGGLGLNLQ+ADTVIIFD+DWNPHQDLQAQDRAHRIGQ EVR+LRL+T S+EE IL+
Sbjct: 1265 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEENILSR 1324
Query: 190 ARYKLNMDEKVIQAGMFDQKSTGSERQQFLQSIL-HQXXXXXXXXXXXXXXXXXXXMIAR 366
A+YKL++D KVIQAG FD KST ER+ FL+S+L H +I+R
Sbjct: 1325 AQYKLDLDGKVIQAGKFDNKSTPEEREAFLRSLLEHDGDDDHDLTYGELQDDELNELISR 1384
Query: 367 SEEELEIFKQIDLERKKTETQ------SRLIDESELPDW 465
++EEL +FK++D ER T+ RL+ +ELPD+
Sbjct: 1385 TDEELVLFKKLDKERAATDIYGKGKPLERLLTVNELPDF 1423
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 171 bits (415), Expect = 6e-44
Identities = 91/164 (55%), Positives = 115/164 (70%), Gaps = 7/164 (4%)
Frame = +1
Query: 10 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 189
AGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ EVR+ RL+T SVEE ILA
Sbjct: 814 AGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILAR 873
Query: 190 ARYKLNMDEKVIQAGMFDQKSTGSERQQFLQSIL-HQXXXXXXXXXXXXXXXXXXXMIAR 366
A+YKL++D KVIQAG FD KST ER+ FL+S+L ++ ++AR
Sbjct: 874 AQYKLDIDGKVIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEKGELDDDELNEILAR 933
Query: 367 SEEELEIFKQI--DLERK----KTETQSRLIDESELPDWLVKND 480
++EL +FKQ+ DLER+ K + + RLI SELP++ + +
Sbjct: 934 GDDELRLFKQMTEDLERESPYGKNKEKERLIQVSELPEFYQREE 977
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 101 bits (241), Expect = 8e-23
Identities = 48/89 (53%), Positives = 64/89 (71%)
Frame = +1
Query: 10 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 189
AGGLG+NL +ADTVIIFDSDWNP DLQA RAHRIGQ+N V V RL++ +++EE +L
Sbjct: 768 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLER 827
Query: 190 ARYKLNMDEKVIQAGMFDQKSTGSERQQF 276
AR K+ ++ +I G+ D K S+ +F
Sbjct: 828 ARRKMILEYAIISLGVTD-KQKNSKNDKF 855
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 99 bits (238), Expect = 2e-22
Identities = 48/89 (53%), Positives = 64/89 (71%)
Frame = +1
Query: 10 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 189
AGGLG+NL +ADTVIIFDSDWNP DLQA RAHRIGQ+N V V R ++ ++VEE IL
Sbjct: 782 AGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILER 841
Query: 190 ARYKLNMDEKVIQAGMFDQKSTGSERQQF 276
AR K+ ++ +I G+ +KS S+ ++
Sbjct: 842 ARRKMILEYAIISLGV-TEKSKNSKNDKY 869
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 91.5 bits (217), Expect = 6e-20
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +1
Query: 10 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 189
+GGLG+NL ADTVI +DSDWNP D QAQDR+HRIGQ +V + RL++ +VE +L
Sbjct: 1068 SGGLGINLTGADTVIFYDSDWNPQLDAQAQDRSHRIGQTRDVHIYRLISEYTVESNMLRR 1127
Query: 190 ARYKLNMDEKVIQAGMF 240
A K +D+ VIQ G F
Sbjct: 1128 ANQKRMLDKIVIQGGEF 1144
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 90.6 bits (215), Expect = 1e-19
Identities = 42/75 (56%), Positives = 54/75 (72%)
Frame = +1
Query: 10 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 189
AGGLG+NL +ADTVI +DSDWNP D QA DRAHRIGQ+ +V V R +T ++EERI+
Sbjct: 1506 AGGLGINLTAADTVIFYDSDWNPSIDSQAMDRAHRIGQQKQVTVYRFITRGTIEERIVIR 1565
Query: 190 ARYKLNMDEKVIQAG 234
A+ K + + VI G
Sbjct: 1566 AKEKEEVQKVVISGG 1580
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 89.8 bits (213), Expect = 2e-19
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = +1
Query: 13 GGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAA 192
GGLGLNL ADTVI + DWNP +DLQA DRAHRIGQ+ V V RL+T +EE+I+
Sbjct: 1801 GGLGLNLTGADTVIFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRGCLEEKIMGLQ 1860
Query: 193 RYKLNMDEKVIQAGMFDQKSTGSER 267
R+K+N+ V+ S G+++
Sbjct: 1861 RFKMNVASTVVNQQNAGLSSIGTDQ 1885
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 87.8 bits (208), Expect = 8e-19
Identities = 49/94 (52%), Positives = 67/94 (71%)
Frame = +1
Query: 10 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 189
AGG+G+NL SADTVII D D+NPHQD+QA RAHR GQ+ +V V L T +SVEE+I+
Sbjct: 949 AGGVGINLASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQN 1008
Query: 190 ARYKLNMDEKVIQAGMFDQKSTGSERQQFLQSIL 291
A+ KL +D ++++ DQ + SE+ L+SIL
Sbjct: 1009 AQKKLVLDHLIVES--LDQ-NHNSEKD--LESIL 1037
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 81.8 bits (193), Expect = 5e-17
Identities = 41/88 (46%), Positives = 56/88 (63%)
Frame = +1
Query: 10 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 189
AGG G+NL A+ VI++D +NP DLQA+DRAHR+GQ EV V+RL+T N++EE I
Sbjct: 1001 AGGFGINLACANVVILYDCSYNPFDDLQAEDRAHRVGQVREVTVIRLITDNTIEEYIQKL 1060
Query: 190 ARYKLNMDEKVIQAGMFDQKSTGSERQQ 273
A KL +D + G D++ G Q
Sbjct: 1061 ANTKLALDMSLSSDGK-DREEIGERLVQ 1087
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 80.6 bits (190), Expect = 1e-16
Identities = 39/91 (42%), Positives = 54/91 (59%)
Frame = +1
Query: 10 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 189
+GG G+NL A+ VI+FD +NP D+QA+DRAHR+GQ V V RL+T N++EE I
Sbjct: 841 SGGFGINLTCANIVILFDCSFNPFDDMQAEDRAHRVGQTRPVHVYRLITKNTIEENIRRL 900
Query: 190 ARYKLNMDEKVIQAGMFDQKSTGSERQQFLQ 282
A KL ++ + QK E + LQ
Sbjct: 901 ANTKLTLESSLTTDSEKIQKEISGELMKSLQ 931
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 79.0 bits (186), Expect = 3e-16
Identities = 35/72 (48%), Positives = 50/72 (69%)
Frame = +1
Query: 13 GGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAA 192
GGLG+NL AD VI+FD DWNP D QA++RA R+GQ+ +V V RLMT ++EE+I
Sbjct: 704 GGLGVNLTGADRVILFDPDWNPSTDAQARERAWRLGQKKDVVVYRLMTAGTIEEKIYHRQ 763
Query: 193 RYKLNMDEKVIQ 228
+K + K+++
Sbjct: 764 IFKQFLTNKILK 775
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 74.5 bits (175), Expect = 7e-15
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +1
Query: 10 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 189
AG +GLNL A+ VII D WNP+ + QA DRAHRIGQ V +LR++T N++EER+LA
Sbjct: 944 AGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIGQDKPVNILRIVTNNTIEERVLAL 1003
Query: 190 ARYKLNM-DEKVIQAGMFDQKSTGSERQQFL 279
K + D + + G+ + ++ FL
Sbjct: 1004 QDRKRELIDSALGEKGLREISRLNTKELSFL 1034
>SPAC25A8.01c ||snf2SR|fun thirty related protein
Fft3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 922
Score = 73.7 bits (173), Expect = 1e-14
Identities = 32/68 (47%), Positives = 47/68 (69%)
Frame = +1
Query: 10 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 189
AGG G+NL A+ VI++D +NP DLQA+DRAHR+GQ+ EV V + + +++EE I
Sbjct: 838 AGGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTIEEHIQRL 897
Query: 190 ARYKLNMD 213
A K+ +D
Sbjct: 898 ANAKIALD 905
>SPBC582.10c |||ATP-dependent DNA helicase Rhp16b |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 830
Score = 66.1 bits (154), Expect = 3e-12
Identities = 36/93 (38%), Positives = 55/93 (59%)
Frame = +1
Query: 13 GGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAA 192
G LGLNL A VI+ D WNP + QA DR HRIGQR +V V +L+ N++EE+I+
Sbjct: 732 GALGLNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVELQ 791
Query: 193 RYKLNMDEKVIQAGMFDQKSTGSERQQFLQSIL 291
K ++ ++ + G +KS + ++ L +L
Sbjct: 792 NLKRDLAKQALGDG---KKSVFTSKKLTLNDLL 821
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 60.9 bits (141), Expect = 1e-10
Identities = 34/92 (36%), Positives = 43/92 (46%)
Frame = +1
Query: 10 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 189
AGG+ LNL A V + D WN QA DR HRIGQ+ ++V+ L NS+E +I+
Sbjct: 871 AGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKVITLCIENSIESKIIEL 930
Query: 190 ARYKLNMDEKVIQAGMFDQKSTGSERQQFLQS 285
K M I E QFL S
Sbjct: 931 QEKKAQMIHATIDQDEKALNQLSVEDMQFLFS 962
>SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 852
Score = 60.9 bits (141), Expect = 1e-10
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = +1
Query: 10 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 189
AGG G+NL A+ +I+FD DWNP D QA R R GQ+ + V R + ++EE+I
Sbjct: 689 AGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQR 748
Query: 190 ARYKLNMDEKVI 225
+K ++ V+
Sbjct: 749 QSHKQSLSSCVV 760
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 59.7 bits (138), Expect = 2e-10
Identities = 29/74 (39%), Positives = 48/74 (64%)
Frame = +1
Query: 10 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 189
AG +GLNL A+ VI+ + +NP + QA DR HR+GQ+ V V R +T +++EERI++
Sbjct: 802 AGSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRLGQQKPVTVYRFITKDTIEERIVSV 861
Query: 190 ARYKLNMDEKVIQA 231
R K + ++ + +
Sbjct: 862 QRKKRQLVKEALDS 875
>SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase
Rdh54|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 59.3 bits (137), Expect = 3e-10
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = +1
Query: 10 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 189
AGG GLNL + +II++ WNP QDLQA R +R GQ+ V + ++ ++ERI
Sbjct: 611 AGGCGLNLTGSTRLIIYEPSWNPAQDLQALSRIYRSGQKRPVCIYTFLSSGMLDERIFIR 670
Query: 190 ARYKLNMDEKVIQAGMFDQKS 252
K + I + +K+
Sbjct: 671 QNTKQGLSSSFIDSDASQKKN 691
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 54.8 bits (126), Expect = 6e-09
Identities = 28/58 (48%), Positives = 37/58 (63%)
Frame = +1
Query: 10 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERIL 183
AGG+GLNL A+ V I D W+ + QA DR HR+GQ V V R + ++VEER+L
Sbjct: 1042 AGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYIVRDTVEERML 1099
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 31.1 bits (67), Expect = 0.091
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +1
Query: 22 GLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERIL 183
GL L +A V + + N ++QA R HRIGQ V + ++VE IL
Sbjct: 1265 GLTLTNATHVFMCEPLLNSGIEMQAISRVHRIGQTRPTFVYYYIVEDTVEGHIL 1318
>SPAC25H1.02 |jmj1||Jmj1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 464
Score = 27.5 bits (58), Expect = 1.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +1
Query: 403 LERKKTETQSRLIDESELPDWLVKND 480
++ K +T + L D+ +LP W+ K+D
Sbjct: 260 IDPKDLQTIASLYDDQQLPSWITKDD 285
>SPCC16C4.17 |mug123||meiotically upregulated gene
Mug123|Schizosaccharomyces pombe|chr 3|||Manual
Length = 235
Score = 27.1 bits (57), Expect = 1.5
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 126 QRSESVKTHDSEFGRGENPRSRPIQTEHGREGDPGRYVRS 245
+R + +HD + R P S I + H G YV+S
Sbjct: 2 ERLATRSSHDDPYSRSSLPTSNAINSNHESNGSTFSYVQS 41
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 2.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 25 LNLQSADTVIIFDSDWNPHQD 87
+NL T + D+DWNP D
Sbjct: 74 VNLFRGHTAAVLDTDWNPFHD 94
>SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 26.2 bits (55), Expect = 2.6
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Frame = +3
Query: 72 ESASGFTSARSSPSHRATQRSESVKTHDSE---FGRGENPRSRPIQTEHGREGDP----- 227
ES ++S + H SES +DS G P+ R + R DP
Sbjct: 133 ESQPPYSSYSTDAPHYYHAGSESSAYYDSRSRLHGIQPPPKRRTLSPPPRRLADPVVVGS 192
Query: 228 GRYVRSEVDRFRTATVPAEYPTS 296
RYV EV R T+ +E P+S
Sbjct: 193 SRYVEEEVYRRPPYTLASEVPSS 215
>SPAC57A7.10c |sec21||coatomer gamma subunit Sec21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 25.8 bits (54), Expect = 3.4
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 108 PSHRATQRSESVKTHDSEFGRGENPRSRPIQTEHGREGDPGRYVRSEVDRFRTATVPAE 284
PS A +RS + + +FG+G + +S P+ ++ + + R ++ + T PAE
Sbjct: 573 PSLPALERSLVIYISERKFGQGFDIKSVPVLSQEEIDAENLRIKKATTEVEFTEVTPAE 631
>SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 25.4 bits (53), Expect = 4.5
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = -3
Query: 260 EPVDF*SNIPAWITFSSMFSLYRAAARILSSTEFTVMSLNTLTSLRCPMRWARSCAC 90
+PV F W TFS FS+ A ++++ + ++S +++ C + C C
Sbjct: 54 KPV-FKREFSTWATFSFAFSISGLFATVVTTYSYPLISGGAPSAVWCWLIAGAGCMC 109
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 25.4 bits (53), Expect = 4.5
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +3
Query: 93 SARSSPSHRATQRSESVKTHDSEFGRGENPRSRPIQTEHGREGDPGRYVRSEVDRFRTAT 272
SA ++P + S +F +++P + R G+P R+ R RTAT
Sbjct: 434 SATATPKRSPSATPTSALPPIGKFAPPTTAKAQPAPEK--RRGEPAVQTRNHSKRTRTAT 491
Query: 273 VPAEYPTSR 299
E T R
Sbjct: 492 SSVEETTPR 500
>SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subunit
Orc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 707
Score = 25.0 bits (52), Expect = 6.0
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 471 DQPVRQFGLVDEPRLGLGLLPFQVYLFEYLQLLLGTR 361
D P R RLGL +PF+ Y L++++ R
Sbjct: 491 DLPERILSNRISSRLGLSRVPFEPYTHTQLEIIIAAR 527
>SPBC651.12c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 25.0 bits (52), Expect = 6.0
Identities = 16/67 (23%), Positives = 29/67 (43%)
Frame = +3
Query: 78 ASGFTSARSSPSHRATQRSESVKTHDSEFGRGENPRSRPIQTEHGREGDPGRYVRSEVDR 257
A GF SA+ HR E+++ + + G++ S ++ G + D + S D
Sbjct: 28 AFGFNSAKKEKLHRMALSMEAIEDVEDQSFNGKS--SNLVRKRRGLDEDIDEFSSSSEDE 85
Query: 258 FRTATVP 278
+ A P
Sbjct: 86 RKPARHP 92
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 25.0 bits (52), Expect = 6.0
Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Frame = +1
Query: 202 LNMDEKVIQAGMFDQKSTGSERQQFLQSILH--QXXXXXXXXXXXXXXXXXXXMIARSEE 375
++ D++ +Q MFD Q Q +L Q EE
Sbjct: 259 IDRDDQSVQTDMFDGMDEDDLAGQIEQGMLELSQDTRESTAEPRAAGEESASEEEEEEEE 318
Query: 376 ELEIFKQIDLERKKTETQSRLIDE--SELPDWLVK 474
E E + D E ++ + Q+RL+ E SEL + K
Sbjct: 319 EEEEENEADDETRENKRQNRLVREFISELESSIQK 353
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 24.6 bits (51), Expect = 7.9
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 102 SSPSHRATQRSESVKTHDSEFGRGEN-PRSRPIQTEHGREGDPGRYVRSEVDRFRTATVP 278
S H + S ++ S R E+ P +P + +H R+ +E R + P
Sbjct: 654 SDEQHLGKESLPSQQSTVSNHHRKESIPSKQPTEGQHARQESLPSQQTTETKHLRKESTP 713
Query: 279 AEYPT 293
++ PT
Sbjct: 714 SKQPT 718
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 24.6 bits (51), Expect = 7.9
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +3
Query: 126 QRSESVKTHDSEFGRGENPRSRPIQTEH 209
+ SES+ +H+SE+ P + ++ H
Sbjct: 789 ESSESLDSHESEYKLNNTPSEQSVKVSH 816
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.132 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,544,261
Number of Sequences: 5004
Number of extensions: 25507
Number of successful extensions: 122
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 186042952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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