Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_D15
         (565 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK125475-1|BAC86173.1|  913|Homo sapiens protein ( Homo sapiens ...    33   0.69 
X77366-1|CAA54555.1|  772|Homo sapiens hbZ17 protein.                  30   6.5  
BC131769-1|AAI31770.1|  413|Homo sapiens NFE2L1 protein protein.       30   6.5  
BC010623-1|AAH10623.1|  742|Homo sapiens NFE2L1 protein protein.       30   6.5  
AK090459-1|BAC03440.1|  791|Homo sapiens FLJ00380 protein protein.     30   6.5  

>AK125475-1|BAC86173.1|  913|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43486 fis, clone OCBBF3003592, weakly  similar
           to Dynein beta chain, flagellar outer arm. ).
          Length = 913

 Score = 33.1 bits (72), Expect = 0.69
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +1

Query: 262 LFEDTMFHETDCEFFQDLVQ----WCSAPAKEEQVLTIDPPKKNEDRTCNNDTLHTPLSP 429
           LFE T +  T C+   D++Q    + +    E + +T DP K+ +D  C  D L TP+  
Sbjct: 278 LFERTDYMATICQDLSDVLQVLEEFYNIFGPELKAVTGDP-KRIDDVLCRVDGLVTPMEN 336

Query: 430 QGWDAFDVNSS 462
             +D F + SS
Sbjct: 337 LTFDPFSIKSS 347


>X77366-1|CAA54555.1|  772|Homo sapiens hbZ17 protein.
          Length = 772

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +1

Query: 442 AFDVNSSYQTGFYNTTPVDPLSPNFE--GFTPFNQYLT-HQRS 561
           A +VN+S     Y+  P DPLS N+     TP NQ ++ HQ S
Sbjct: 325 AMEVNTSASEILYSAPPGDPLSTNYSLAPNTPINQNVSLHQAS 367


>BC131769-1|AAI31770.1|  413|Homo sapiens NFE2L1 protein protein.
          Length = 413

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +1

Query: 442 AFDVNSSYQTGFYNTTPVDPLSPNFE--GFTPFNQYLT-HQRS 561
           A +VN+S     Y+  P DPLS N+     TP NQ ++ HQ S
Sbjct: 325 AMEVNTSASEILYSAPPGDPLSTNYSLAPNTPINQNVSLHQAS 367


>BC010623-1|AAH10623.1|  742|Homo sapiens NFE2L1 protein protein.
          Length = 742

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +1

Query: 442 AFDVNSSYQTGFYNTTPVDPLSPNFE--GFTPFNQYLT-HQRS 561
           A +VN+S     Y+  P DPLS N+     TP NQ ++ HQ S
Sbjct: 295 AMEVNTSASEILYSAPPGDPLSTNYSLAPNTPINQNVSLHQAS 337


>AK090459-1|BAC03440.1|  791|Homo sapiens FLJ00380 protein protein.
          Length = 791

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +1

Query: 442 AFDVNSSYQTGFYNTTPVDPLSPNFE--GFTPFNQYLT-HQRS 561
           A +VN+S     Y+  P DPLS N+     TP NQ ++ HQ S
Sbjct: 344 AMEVNTSASEILYSAPPGDPLSTNYSLAPNTPINQNVSLHQAS 386


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.313    0.131    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,816,745
Number of Sequences: 237096
Number of extensions: 1595861
Number of successful extensions: 3258
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3257
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)