Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_D10
(529 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 235 1e-62
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 235 1e-62
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 233 5e-62
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 233 9e-62
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 233 9e-62
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 232 1e-61
03_01_0034 + 318432-318825,318902-319851 228 2e-60
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 224 3e-59
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 121 3e-28
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 115 3e-26
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 109 2e-24
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 99 3e-21
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 85 3e-17
01_01_0560 + 4117203-4117458,4119359-4119609,4119691-4119860,412... 31 0.76
09_04_0325 + 16689613-16689772,16690043-16690329 30 1.0
01_01_0624 - 4696314-4696608,4696704-4697394,4699525-4699540,469... 30 1.0
02_04_0499 - 23485707-23485822,23485899-23486112,23486464-234865... 28 4.0
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 28 5.3
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 28 5.3
11_06_0061 - 19702893-19703869,19703960-19704098,19704166-197042... 27 7.1
01_01_0562 + 4126368-4128196,4128517-4128715,4128827-4128886,412... 27 7.1
08_01_0554 - 4851698-4851943,4852041-4852760 27 9.3
07_03_1391 + 26234647-26235026,26235112-26235226,26235345-262354... 27 9.3
07_03_0252 - 15846143-15848473 27 9.3
06_03_0964 - 26372924-26372990,26373172-26373686 27 9.3
01_06_0093 + 26385471-26385740,26385842-26385934,26386526-263865... 27 9.3
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 235 bits (576), Expect = 1e-62
Identities = 106/133 (79%), Positives = 118/133 (88%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MREI+H+Q GQCGNQIGAKFWE+I +EHGID TG Y G DLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEAS----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
GG+YVPRA+L+DLEPGTMD+VRSG YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56 -GGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 490 AVLDVVRKECENC 528
+VLDVVRKE ENC
Sbjct: 115 SVLDVVRKEAENC 127
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 235 bits (576), Expect = 1e-62
Identities = 103/134 (76%), Positives = 120/134 (89%)
Frame = +1
Query: 127 KMREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATA 306
KMREI+H+Q GQCGNQIG+KFWE++ +EHGIDPTG Y GT DLQLER++VYYNEAS
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASC--- 236
Query: 307 ESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELV 486
G++VPRA+L+DLEPGTMD+VR+G YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+
Sbjct: 237 ---GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELI 293
Query: 487 DAVLDVVRKECENC 528
D+VLDVVRKE ENC
Sbjct: 294 DSVLDVVRKEAENC 307
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 233 bits (571), Expect = 5e-62
Identities = 104/133 (78%), Positives = 118/133 (88%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MREI+H+Q GQCGNQIGAKFWE+I +EHG+D TG Y G DLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEAS----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
GG+YVPRA+L+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56 -GGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 490 AVLDVVRKECENC 528
+VLDVVRKE ENC
Sbjct: 115 SVLDVVRKEAENC 127
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 233 bits (569), Expect = 9e-62
Identities = 102/133 (76%), Positives = 118/133 (88%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MREI+H+Q GQCGNQIGAKFWE++ +EHGIDPTG Y G DLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASC---- 56
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
G++VPRA+L+DLEPGTMD+VR+G YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 57 --GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 490 AVLDVVRKECENC 528
+VLDVVRKE ENC
Sbjct: 115 SVLDVVRKEAENC 127
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 233 bits (569), Expect = 9e-62
Identities = 102/133 (76%), Positives = 119/133 (89%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MREI+H+Q GQCGNQIG+KFWE++ +EHGIDPTG Y GT DLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASC---- 56
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
G++VPRA+L+DLEPGTMD+VR+G YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 57 --GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 490 AVLDVVRKECENC 528
+VLDVVRKE ENC
Sbjct: 115 SVLDVVRKEAENC 127
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 232 bits (568), Expect = 1e-61
Identities = 104/133 (78%), Positives = 118/133 (88%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MREI+H+Q GQCGNQIGAKFWE+I +EHGID TG Y G DLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEAS----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
GG++VPRA+L+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56 -GGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 490 AVLDVVRKECENC 528
+VLDVVRKE ENC
Sbjct: 115 SVLDVVRKEAENC 127
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 228 bits (557), Expect = 2e-60
Identities = 102/133 (76%), Positives = 115/133 (86%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G DLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASC---- 56
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
G++VPRA+L+DLEPGTMD+VRSG YG +FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 57 --GRFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 490 AVLDVVRKECENC 528
AVLDVVRKE ENC
Sbjct: 115 AVLDVVRKEAENC 127
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 224 bits (548), Expect = 3e-59
Identities = 100/133 (75%), Positives = 115/133 (86%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MREI+H+Q GQCGNQIGAKFWE+I EHG+DPTG Y GT QLERI+VY+NEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEAS----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
GG++VPRA+L+DLEPGTMD++RSG G +FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56 -GGRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 490 AVLDVVRKECENC 528
+VLDVVRKE ENC
Sbjct: 115 SVLDVVRKEAENC 127
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 121 bits (292), Expect = 3e-28
Identities = 60/134 (44%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MREI+ + GQ G Q+G WE+ EHGI+P G + V ++ + +E
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSD-----TTVGVAHDAFNTFFSE 55
Query: 310 SG-GKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELV 486
+G GK+VPRAI +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E+V
Sbjct: 56 TGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIV 115
Query: 487 DAVLDVVRKECENC 528
D LD VRK +NC
Sbjct: 116 DLCLDRVRKLADNC 129
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 115 bits (276), Expect = 3e-26
Identities = 58/133 (43%), Positives = 78/133 (58%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MRE + + GQ G Q+G WE+ EHGI P G + GD + +N T
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDG--QMPGDKTVGGGDDAFNTFFSETG- 57
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 58 -AGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVD 116
Query: 490 AVLDVVRKECENC 528
LD +RK +NC
Sbjct: 117 LCLDRIRKLADNC 129
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 109 bits (261), Expect = 2e-24
Identities = 57/138 (41%), Positives = 79/138 (57%), Gaps = 5/138 (3%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYR-----GTGDLQLERISVYYNEAS 294
MRE + + GQ G Q+G WE+ EHGI G G GD + + +++E
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGD---DAFNTFFSETG 57
Query: 295 VATAESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G
Sbjct: 58 A------GKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIG 111
Query: 475 AELVDAVLDVVRKECENC 528
E+VD LD +RK +NC
Sbjct: 112 KEIVDLCLDRIRKLADNC 129
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 98.7 bits (235), Expect = 3e-21
Identities = 48/132 (36%), Positives = 78/132 (59%), Gaps = 2/132 (1%)
Frame = +1
Query: 133 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAES 312
REI+ +Q GQCGNQIG +FW+ + EHGI G+ +R V++ +A
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQA------D 56
Query: 313 GGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELV 486
Y+PRA+L+DLEP ++ +++ Y L+ +N + GAGNNWA G Y +G ++V
Sbjct: 57 DQHYIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVV 115
Query: 487 DAVLDVVRKECE 522
D ++D++ +E +
Sbjct: 116 DDIMDMIDREAD 127
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 85.4 bits (202), Expect = 3e-17
Identities = 37/73 (50%), Positives = 51/73 (69%)
Frame = +1
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
S GK+VPRA+ +DLEP +D V++G Y QLF P+ + + A NN+A+GHYT G E+VD
Sbjct: 117 SSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVD 176
Query: 490 AVLDVVRKECENC 528
LD +RK +NC
Sbjct: 177 LCLDRLRKLADNC 189
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGV 234
MREI+ + GQ G Q+G WE+ EHGI P G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGL 35
>01_01_0560 +
4117203-4117458,4119359-4119609,4119691-4119860,
4120188-4120385,4120922-4121081
Length = 344
Score = 30.7 bits (66), Expect = 0.76
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 257 NSRESPFIIMRPLLRRRRAVASTCPAPYSSTSNQGP 364
N+ +PF+ RPL+ R +S PAP++S S P
Sbjct: 187 NNASNPFVRQRPLVTRDGPESSVPPAPWASDSATTP 222
>09_04_0325 + 16689613-16689772,16690043-16690329
Length = 148
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/19 (73%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +1
Query: 400 FRPDNFVFGQSGAGN-NWA 453
F PDNFVF QS AG NWA
Sbjct: 129 FNPDNFVFHQSVAGGINWA 147
>01_01_0624 -
4696314-4696608,4696704-4697394,4699525-4699540,
4699577-4699630,4699741-4699809
Length = 374
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/33 (54%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 402 EELPVAAGADGVHGPWFEVE--EYGAGHVLATA 310
+E VAA DG HGPW VE Y AG LA A
Sbjct: 107 QERLVAARPDGSHGPWSYVEGAVYLAGRGLAVA 139
>02_04_0499 -
23485707-23485822,23485899-23486112,23486464-23486511,
23486609-23486695,23486808-23486945,23487159-23487389,
23488524-23489504
Length = 604
Score = 28.3 bits (60), Expect = 4.0
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Frame = +1
Query: 247 GDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRP------ 408
GDL ER+S +A+ A A +GG + R+ +LD E +DA+ GY +L RP
Sbjct: 154 GDLPEERLSA--GDAA-AGAGAGGLAIARSEVLDRELDLLDAL---GY-RLGRPTAHTFA 206
Query: 409 DNFV--FGQSGAGNNWAKGHYTEGAELVD 489
D+F+ +G SG A H+ L+D
Sbjct: 207 DHFLARYGYSGGDAVHAVAHHLADLTLLD 235
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGI 219
MRE V +Q G N +G+ FW E G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGI 219
MRE V +Q G N +G+ FW E G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>11_06_0061 -
19702893-19703869,19703960-19704098,19704166-19704287,
19704362-19704416,19704508-19704624,19704718-19705413,
19706358-19706393,19707190-19708236
Length = 1062
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 399 ELPVAAGADGVHGPWFEVEEYG 334
E+ V ADG HG WFE G
Sbjct: 57 EVEVRVDADGFHGSWFEAVVVG 78
>01_01_0562 +
4126368-4128196,4128517-4128715,4128827-4128886,
4129129-4129233,4129987-4130127,4130223-4130285,
4130925-4131152,4131250-4131333,4132000-4132157,
4132252-4132777,4133641-4133700,4133904-4134026,
4134906-4135181,4135282-4135347,4135500-4135631,
4135977-4136798,4137026-4137306,4137564-4137796,
4138022-4138260,4138367-4138558,4138808-4139080,
4139186-4139332
Length = 2078
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 290 PLLRRRRAVASTCPAPYSSTSNQGPWTPS 376
PLLR + + +S CPAP+ S P P+
Sbjct: 51 PLLRLKVSDSSDCPAPHHPHSQHQPLLPT 79
>08_01_0554 - 4851698-4851943,4852041-4852760
Length = 321
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/22 (63%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
Frame = -2
Query: 420 DEVVWAEELPVAAGAD--GVHG 361
D +V A+E+PVAAGAD G HG
Sbjct: 244 DVLVGAKEVPVAAGADSGGGHG 265
>07_03_1391 +
26234647-26235026,26235112-26235226,26235345-26235410,
26235519-26235607,26235717-26235807,26235917-26236063,
26236160-26236252,26236373-26236474,26236581-26237255
Length = 585
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 221 TLPAFTGAPAIYNSRESPFIIMRPLLRRRRAVASTCPAPYS 343
+L T PA+ + R +P + R LLR R A A+ AP S
Sbjct: 53 SLQVETKIPAVTSPRAAPAPMPRELLRTRFADAAAAAAPES 93
>07_03_0252 - 15846143-15848473
Length = 776
Score = 27.1 bits (57), Expect = 9.3
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 208 EHGIDPTGVYRGTGDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMD-AVRSG 384
+ GID T G D +ER + + + A E G + A ++DL PG D A
Sbjct: 494 DSGIDFTA---GAHDSGMERATPWTPMSEAALFEQQGPPLAPAAVVDLPPGNADCADHQS 550
Query: 385 GYGQL 399
YG +
Sbjct: 551 SYGDM 555
>06_03_0964 - 26372924-26372990,26373172-26373686
Length = 193
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 292 SVATAESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAG 441
++ATA GG P+AI+L +P + A R+ G++ R +SGAG
Sbjct: 52 AMATARGGGARWPKAIVLQQQPASTTA-RARRCGRIVRRCCGRKTRSGAG 100
>01_06_0093 +
26385471-26385740,26385842-26385934,26386526-26386591,
26386872-26387012,26387465-26387692,26387808-26387925,
26387993-26388132,26388259-26388426,26388520-26388675,
26388773-26389138
Length = 581
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 525 VLALFANYVEHGIDEFGAF 469
V ALF Y EHG+DE A+
Sbjct: 316 VEALFRRYTEHGLDEDSAY 334
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.136 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,926,216
Number of Sequences: 37544
Number of extensions: 249311
Number of successful extensions: 985
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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