Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_D10
(529 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 239 7e-64
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 236 6e-63
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 230 4e-61
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 229 7e-61
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 226 7e-60
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 226 7e-60
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 168 2e-42
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 168 2e-42
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 121 3e-28
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 120 5e-28
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 120 5e-28
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 120 6e-28
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 120 6e-28
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 118 2e-27
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 117 6e-27
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 117 6e-27
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 115 2e-26
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 113 7e-26
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 113 7e-26
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 113 7e-26
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 113 7e-26
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 111 3e-25
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 108 2e-24
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 91 3e-19
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 88 3e-18
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 88 3e-18
Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical pr... 28 4.8
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 239 bits (586), Expect = 7e-64
Identities = 110/133 (82%), Positives = 119/133 (89%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MREIVH+QAGQCGNQIGAKFWE+IS+EHGIDPTG Y G DLQLERI+VYYNEAS
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEAS----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
GGKYVPRA L+DLEPGTMD+VR+G +GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -GGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 490 AVLDVVRKECENC 528
VLDVVRKE E+C
Sbjct: 115 NVLDVVRKEAESC 127
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 236 bits (578), Expect = 6e-63
Identities = 108/133 (81%), Positives = 118/133 (88%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MREIVH+QAGQCGNQIGAKFWE+IS+EHGI P G Y+G DLQLERI+VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEAN----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
GGKYVPRA+L+DLEPGTMD+VRSG +GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -GGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 490 AVLDVVRKECENC 528
VLDVVRKE E C
Sbjct: 115 NVLDVVRKEAEGC 127
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 230 bits (563), Expect = 4e-61
Identities = 104/133 (78%), Positives = 116/133 (87%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MREIVH+QAGQCGNQIG+KFWE+IS+EHGI P G ++G DLQLERI VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEAN----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
GKYVPRA+L+DLEPGTMD+VRSG +GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -NGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 490 AVLDVVRKECENC 528
VLDV+RKE E C
Sbjct: 115 NVLDVIRKEAEGC 127
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 229 bits (561), Expect = 7e-61
Identities = 104/133 (78%), Positives = 116/133 (87%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MREIVH+QAGQCGNQIG+KFWE+IS+EHGI P G ++G DLQLERI VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEAN----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
GKYVPRA+L+DLEPGTMD+VRSG +GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -NGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 490 AVLDVVRKECENC 528
VLDV+RKE E C
Sbjct: 115 NVLDVIRKEAEGC 127
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 226 bits (553), Expect = 7e-60
Identities = 104/132 (78%), Positives = 116/132 (87%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MREIVH+QAGQCGNQIG+KFWE+IS+EHGIDP+G Y G DLQLERI+VYYNEA
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAG----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
KYVPRA+L+DLEPGTMD+VRSG +GQLFRPDN+VFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 490 AVLDVVRKECEN 525
VLDVVRKE E+
Sbjct: 115 NVLDVVRKEAES 126
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 226 bits (553), Expect = 7e-60
Identities = 104/132 (78%), Positives = 116/132 (87%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MREIVH+QAGQCGNQIG+KFWE+IS+EHGIDP+G Y G DLQLERI+VYYNEA
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAG----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
KYVPRA+L+DLEPGTMD+VRSG +GQLFRPDN+VFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 490 AVLDVVRKECEN 525
VLDVVRKE E+
Sbjct: 115 NVLDVVRKEAES 126
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 168 bits (408), Expect = 2e-42
Identities = 77/131 (58%), Positives = 99/131 (75%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
M+EI+++Q GQCGNQIGAKFWE ISEEHG+ G Y+G QLERI+ YY E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEME----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
G KYVPRAIL+DL+P +++ VRS YG+LF P+N V G+SGAGNNW++G+Y +GAE+VD
Sbjct: 56 -GRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVD 114
Query: 490 AVLDVVRKECE 522
VL V+R+E E
Sbjct: 115 KVLSVIRREAE 125
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 168 bits (408), Expect = 2e-42
Identities = 77/131 (58%), Positives = 99/131 (75%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
M+EI+++Q GQCGNQIGAKFWE ISEEHG+ G Y+G QLERI+ YY E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEME----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
G KYVPRAIL+DL+P +++ VRS YG+LF P+N V G+SGAGNNW++G+Y +GAE+VD
Sbjct: 56 -GRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVD 114
Query: 490 AVLDVVRKECE 522
VL V+R+E E
Sbjct: 115 KVLSVIRREAE 125
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 121 bits (292), Expect = 3e-28
Identities = 58/133 (43%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
Frame = +1
Query: 133 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTG-DLQLERISVYYNEASVATAE 309
RE V + GQ G QIG WE+ EHG+D G + + + + + +++E+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESM----- 60
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
GK+VPRAI +DLEP +D +R+G YG LF PD + G+ A NN+A+GHYT G EL+D
Sbjct: 61 -NGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELID 119
Query: 490 AVLDVVRKECENC 528
VLD +RK+ ENC
Sbjct: 120 VVLDRIRKQTENC 132
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 120 bits (290), Expect = 5e-28
Identities = 54/133 (40%), Positives = 79/133 (59%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MRE++ + GQ G QIG WE+ EHGI P G E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTG----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -NGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 490 AVLDVVRKECENC 528
VLD +R+ +NC
Sbjct: 115 TVLDRIRRLADNC 127
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 120 bits (290), Expect = 5e-28
Identities = 54/133 (40%), Positives = 79/133 (59%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MRE++ + GQ G QIG WE+ EHGI P G E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTG----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -NGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 490 AVLDVVRKECENC 528
VLD +R+ +NC
Sbjct: 115 TVLDRIRRLADNC 127
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 120 bits (289), Expect = 6e-28
Identities = 54/133 (40%), Positives = 80/133 (60%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MRE++ + GQ G QIG WE+ EHGI P G + E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTG----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -SGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 490 AVLDVVRKECENC 528
VLD +R+ +NC
Sbjct: 115 TVLDRIRRLADNC 127
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 120 bits (289), Expect = 6e-28
Identities = 54/133 (40%), Positives = 80/133 (60%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MRE++ + GQ G QIG WE+ EHGI P G + E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTG----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -SGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 490 AVLDVVRKECENC 528
VLD +R+ +NC
Sbjct: 115 TVLDRIRRLADNC 127
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 118 bits (285), Expect = 2e-27
Identities = 62/133 (46%), Positives = 79/133 (59%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MREIV + GQ G QIG WE+ EHGI P G+ +E S YN T
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQS--YNTFFSETPS 58
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
GK+VPRAI +DLEP +D VR+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 59 --GKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELID 116
Query: 490 AVLDVVRKECENC 528
V+D VR+ E C
Sbjct: 117 VVMDRVRRLTERC 129
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 117 bits (281), Expect = 6e-27
Identities = 52/133 (39%), Positives = 78/133 (58%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MRE++ + GQ G QIG WE+ EHGI P G + + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTG----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -NGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 490 AVLDVVRKECENC 528
LD +R+ +NC
Sbjct: 115 TTLDRIRRLADNC 127
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 117 bits (281), Expect = 6e-27
Identities = 52/133 (39%), Positives = 78/133 (58%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MRE++ + GQ G QIG WE+ EHGI P G + + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTG----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -NGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 490 AVLDVVRKECENC 528
LD +R+ +NC
Sbjct: 115 TTLDRIRRLADNC 127
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 115 bits (276), Expect = 2e-26
Identities = 56/134 (41%), Positives = 81/134 (60%)
Frame = +1
Query: 127 KMREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATA 306
+ RE++ + GQ G Q+G WE+ EHGI P G+ L ++ S +N T
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDS--FNTFFSETM 62
Query: 307 ESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELV 486
GK+VPRAI++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E++
Sbjct: 63 --AGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEII 120
Query: 487 DAVLDVVRKECENC 528
D V+D VR+ ENC
Sbjct: 121 DVVMDRVRRLVENC 134
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 113 bits (272), Expect = 7e-26
Identities = 56/134 (41%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Frame = +1
Query: 133 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG--VYRGTGDLQLERISVYYNEASVATA 306
RE++ + GQ G QIG WE+ EHGI P G V T D + E I+ ++ E +
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETA---- 63
Query: 307 ESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELV 486
GGK+VPR + +DLEP +D VR+G Y LF P+ + G+ A N +A+G YT G E++
Sbjct: 64 --GGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMI 121
Query: 487 DAVLDVVRKECENC 528
D V+D V++ ENC
Sbjct: 122 DVVMDRVKRLAENC 135
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 113 bits (272), Expect = 7e-26
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 2/135 (1%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDL--QLERISVYYNEASVAT 303
MRE++ + GQ G QIG WE+ EHGI P G L + S +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETG--- 57
Query: 304 AESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E+
Sbjct: 58 ---SGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 114
Query: 484 VDAVLDVVRKECENC 528
+D LD +R+ +NC
Sbjct: 115 IDLTLDRIRRLADNC 129
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 113 bits (272), Expect = 7e-26
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 2/135 (1%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDL--QLERISVYYNEASVAT 303
MRE++ + GQ G QIG WE+ EHGI P G L + S +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETG--- 57
Query: 304 AESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E+
Sbjct: 58 ---SGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 114
Query: 484 VDAVLDVVRKECENC 528
+D LD +R+ +NC
Sbjct: 115 IDLTLDRIRRLADNC 129
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 113 bits (272), Expect = 7e-26
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 2/135 (1%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDL--QLERISVYYNEASVAT 303
MRE++ + GQ G QIG WE+ EHGI P G L + S +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETG--- 57
Query: 304 AESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E+
Sbjct: 58 ---SGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 114
Query: 484 VDAVLDVVRKECENC 528
+D LD +R+ +NC
Sbjct: 115 IDLTLDRIRRLADNC 129
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 111 bits (267), Expect = 3e-25
Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Frame = +1
Query: 133 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDL--QLERISVYYNEASVATA 306
RE++ + GQ G QIG WE+ EHGI P G L + S +++E
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETG---- 56
Query: 307 ESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELV 486
G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E++
Sbjct: 57 --SGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEII 114
Query: 487 DAVLDVVRKECENC 528
D LD +R+ +NC
Sbjct: 115 DLTLDRIRRLADNC 128
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 108 bits (260), Expect = 2e-24
Identities = 51/133 (38%), Positives = 77/133 (57%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAE 309
MRE++ + GQ G QIG WE+ EHGI P G D + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSMEP-DGNSGSLGTFFSDTGY---- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 489
G++VPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 --GRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIID 113
Query: 490 AVLDVVRKECENC 528
LD +R+ NC
Sbjct: 114 TTLDRIRRLANNC 126
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 91.5 bits (217), Expect = 3e-19
Identities = 46/109 (42%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Frame = +1
Query: 208 EHGIDPTG--VYRGTGDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMDAVRS 381
EHGI P G V T D + E I+ ++ E + GGK+VPR + +DLEP +D VR+
Sbjct: 5 EHGIQPDGYHVEDDTYDEETETINTFFAETA------GGKHVPRCLFVDLEPTVVDEVRT 58
Query: 382 GGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENC 528
G Y LF P+ + G+ A N +A+G YT G E++D V+D V++ ENC
Sbjct: 59 GTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENC 107
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 88.2 bits (209), Expect = 3e-18
Identities = 45/132 (34%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Frame = +1
Query: 139 IVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAESGG 318
++ + GQCGNQ+ FW+ + +EHGI+ G D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFYQ-------ADDD 59
Query: 319 KYVPRAILLDLEPGTMDA-VRSGGYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVD 489
YVPRA+L+DLEP ++ ++S + LF DN GAGNNWA G Y +G E+ +
Sbjct: 60 HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQE 118
Query: 490 AVLDVVRKECEN 525
++D++ +E EN
Sbjct: 119 KIMDIIIREAEN 130
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 88.2 bits (209), Expect = 3e-18
Identities = 45/132 (34%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Frame = +1
Query: 139 IVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTGDLQLERISVYYNEASVATAESGG 318
++ + GQCGNQ+ FW+ + +EHGI+ G D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFYQ-------ADDD 59
Query: 319 KYVPRAILLDLEPGTMDA-VRSGGYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVD 489
YVPRA+L+DLEP ++ ++S + LF DN GAGNNWA G Y +G E+ +
Sbjct: 60 HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQE 118
Query: 490 AVLDVVRKECEN 525
++D++ +E EN
Sbjct: 119 KIMDIIIREAEN 130
>Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical
protein H03G16.2 protein.
Length = 377
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 154 AGQCGNQIGAKFWEIISEEHGIDPTGVYR 240
+G C ++G K WE+ SE G PTG+ +
Sbjct: 233 SGDCLKKMGKK-WEVTSEAVGPRPTGILK 260
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.136 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,310,618
Number of Sequences: 27780
Number of extensions: 181370
Number of successful extensions: 671
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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