Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_D09
(379 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 157 5e-38
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 145 3e-34
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 106 2e-22
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 105 3e-22
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 97 1e-19
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 90 1e-17
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 90 1e-17
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 71 5e-12
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 60 1e-08
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 51 6e-06
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 48 8e-05
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 46 2e-04
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 46 3e-04
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 45 4e-04
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 45 4e-04
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 45 4e-04
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 39 0.035
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 39 0.035
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 38 0.082
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 38 0.082
UniRef50_UPI000023CDB9 Cluster: hypothetical protein FG09588.1; ... 37 0.14
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 37 0.14
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 35 0.44
UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1; Ent... 35 0.58
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 35 0.58
UniRef50_Q6K6D7 Cluster: Cell wall protein-like; n=1; Oryza sati... 34 1.0
UniRef50_Q2GWF5 Cluster: Putative uncharacterized protein; n=1; ... 33 1.3
UniRef50_O05122 Cluster: Haemagglutinin; n=1; Mycoplasma gallise... 33 1.8
UniRef50_A4M3B3 Cluster: Cell surface receptor IPT/TIG domain pr... 33 1.8
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 33 1.8
UniRef50_A4IG42 Cluster: Zgc:162193 protein; n=11; Clupeocephala... 33 2.3
UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375, ... 33 2.3
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 33 2.3
UniRef50_Q2G7F6 Cluster: Putative uncharacterized protein precur... 32 3.1
UniRef50_O44381 Cluster: Shar pei/DRhoGEF2; n=5; Drosophila mela... 32 4.1
UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1; Oltmannsiel... 31 5.4
UniRef50_A7HJP3 Cluster: FeoA family protein; n=1; Fervidobacter... 31 7.1
UniRef50_Q7RZS2 Cluster: Putative uncharacterized protein NCU002... 31 7.1
UniRef50_Q2UEE1 Cluster: Predicted protein; n=1; Aspergillus ory... 31 7.1
UniRef50_Q892C9 Cluster: Ethanolamine ammonia-lyase heavy chain;... 31 9.4
UniRef50_Q5YL03 Cluster: Sensory box-like protein; n=2; Aeromona... 31 9.4
UniRef50_Q1YFR7 Cluster: Putative uncharacterized protein; n=1; ... 31 9.4
UniRef50_A7CWP4 Cluster: Putative uncharacterized protein; n=1; ... 31 9.4
UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=... 31 9.4
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 157 bits (382), Expect = 5e-38
Identities = 75/79 (94%), Positives = 76/79 (96%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 188
AIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRFKVVK
Sbjct: 65 AIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 124
Query: 189 VANVSLLALYKEKKERPRS 245
VANVSLLALYK KKERPRS
Sbjct: 125 VANVSLLALYKGKKERPRS 143
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 145 bits (351), Expect = 3e-34
Identities = 68/79 (86%), Positives = 74/79 (93%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 188
AIRKCVRVQLIKNGKKVTAFVP DGCLN ++ENDEVL+AGFGRKG A GDIPGVRFKVVK
Sbjct: 67 AIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVK 126
Query: 189 VANVSLLALYKEKKERPRS 245
V+ VSLLAL+KEKKE+PRS
Sbjct: 127 VSGVSLLALWKEKKEKPRS 145
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 106 bits (254), Expect = 2e-22
Identities = 51/80 (63%), Positives = 59/80 (73%)
Frame = -1
Query: 247 YDLGLSFFSLYRARSDTFATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSMWLRQPSRGT 68
YDLG SFFS ++A +T TLTTLNLTPG+SP A PL P PA TSSFSS +QPS GT
Sbjct: 5 YDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSFGT 64
Query: 67 NAVTFLPFLMSCTRTHLRMA 8
AVTFLPFL++ T TH +A
Sbjct: 65 KAVTFLPFLINWTSTHFSIA 84
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 105 bits (252), Expect = 3e-22
Identities = 49/78 (62%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVV 185
A+RKCVRVQL+KNGK VTAFVP DG LN+I E+DEV++ G +G ++GDIPGVRFKV+
Sbjct: 68 AVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKVI 127
Query: 186 KVANVSLLALYKEKKERP 239
KV VSL A+++ KK++P
Sbjct: 128 KVNGVSLWAIWRGKKQKP 145
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 96.7 bits (230), Expect = 1e-19
Identities = 44/78 (56%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVV 185
AIRKC+R+QLIKNG+++TAF P DG +N I+E+DEV + G GR G + GDIPGVRF+V
Sbjct: 63 AIRKCIRIQLIKNGRQITAFCPGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGVRFRVF 122
Query: 186 KVANVSLLALYKEKKERP 239
KV +VSL + K+++P
Sbjct: 123 KVNDVSLEEMVAGKRDKP 140
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 89.8 bits (213), Expect = 1e-17
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = +3
Query: 108 DEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 245
DEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 89.8 bits (213), Expect = 1e-17
Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = +3
Query: 21 CVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVAN 197
CVRVQL KNGK VTAFVP DG LN I E+DEV++ G +G A GD+PGVRFKV KV
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNG 645
Query: 198 VSLLALYKEKKERP 239
VSL A+ KK++P
Sbjct: 646 VSLKAILLGKKQKP 659
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 71.3 bits (167), Expect = 5e-12
Identities = 36/75 (48%), Positives = 51/75 (68%)
Frame = -3
Query: 233 LLLFFVQS*KRHVCYLNHLKSDSRNVTNSVAFTTESCN*HLIVLLNVVEATITRHECCHF 54
L F +QS +R++ Y NHLK DSR++T S+ F+T+S N +I+ LN V+A I HE C
Sbjct: 4 LAQFDLQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSN-WIIIFLNEVQAAIIGHERCDL 62
Query: 53 LAVLNELYTNTLTNG 9
L VLNEL+ + L +G
Sbjct: 63 LPVLNELHPDALPDG 77
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 60.1 bits (139), Expect = 1e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV 116
AI KC RVQL+KNGKK+ AFVP DGCLN I+EN V
Sbjct: 135 AICKCARVQLVKNGKKIAAFVPNDGCLNFIKENGPV 170
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 51.2 bits (117), Expect = 6e-06
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +3
Query: 108 DEVLVAGFGRKGHAVGDIPGVRFKVVK 188
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 47.6 bits (108), Expect = 8e-05
Identities = 26/60 (43%), Positives = 41/60 (68%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 188
A+RK RV+L NG+ TA++P +G ++++E+ VLV G G K D+PGVR+K+V+
Sbjct: 99 AVRKVARVKL-SNGQMTTAYIPGEG--HNLQEHSVVLVRGGGAK-----DLPGVRYKIVR 150
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 46.4 bits (105), Expect = 2e-04
Identities = 28/62 (45%), Positives = 44/62 (70%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 188
A+RK RV+L NG +VTA++P +G ++++E+ VLV G GR V D+PGVR+K+++
Sbjct: 48 ALRKVARVRL-SNGIEVTAYIPGEG--HNLQEHSIVLVRG-GR----VKDLPGVRYKIIR 99
Query: 189 VA 194
A
Sbjct: 100 GA 101
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 45.6 bits (103), Expect = 3e-04
Identities = 27/62 (43%), Positives = 43/62 (69%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 188
A+RKC RV+L NGK ++A +P +G ++++E+ VLV G GR V D+PGV++ +V+
Sbjct: 107 ALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRG-GR----VQDVPGVKYHLVR 158
Query: 189 VA 194
A
Sbjct: 159 GA 160
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 45.2 bits (102), Expect = 4e-04
Identities = 27/60 (45%), Positives = 41/60 (68%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 188
A RKC RV+L NGK+V F+P +G ++++E++ VLV G GR D+PGV+ K+V+
Sbjct: 87 ANRKCARVRL-SNGKEVICFIPGEG--HNLQEHNIVLVEG-GR----TQDLPGVKLKIVR 138
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 45.2 bits (102), Expect = 4e-04
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = -3
Query: 146 VAFTTESCN*HLIVLLNVVEATITRHECCHFLAVLNELYTNTLTNG 9
+ F+T+S N + I+ LN V+A I HE C L VLNEL+ + L +G
Sbjct: 1 MTFSTKSSNQNFIIFLNEVQAAIIGHERCDLLPVLNELHPDALPDG 46
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 45.2 bits (102), Expect = 4e-04
Identities = 24/76 (31%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Frame = -3
Query: 230 LLFFV--QS*KRHVCYLNHLKSDSRNVTNSVAFTTESCN*HLIVLLNVVEATITRHECCH 57
L+FFV + R+ + L+ D+R++++SV+ ++E + + +V+ + T++ +E H
Sbjct: 15 LVFFVSPKCVNRNSGNFDDLEPDTRHISDSVSLSSEVLDENFVVIFCESKTTVSWNESSH 74
Query: 56 FLAVLNELYTNTLTNG 9
FL VL EL+++ L+NG
Sbjct: 75 FLVVLFELHSDALSNG 90
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 38.7 bits (86), Expect = 0.035
Identities = 20/60 (33%), Positives = 43/60 (71%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 188
A+RK +++L KN K++ A++P +G + +++++ VL+ +KG V D+PG+++KV++
Sbjct: 46 ALRKIAKIKL-KNKKEILAYIPGEG--HALQDHNFVLI----KKGR-VQDLPGIKYKVIR 97
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 38.7 bits (86), Expect = 0.035
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 188
A+RK RV+L G +VTA++P G ++++E+ VLV G GR V D+PGVR+ +V+
Sbjct: 48 ALRKVARVRLT-TGFEVTAYIPGVG--HNLQEHAVVLVRG-GR----VKDLPGVRYHIVR 99
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 37.5 bits (83), Expect = 0.082
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 188
A RKCV V+L NGK++TA++P G ++++E++ VL R G D+PGV+ K V+
Sbjct: 109 ANRKCVLVRL-SNGKEMTAYIP--GIGHNLQEHNIVLC----RVGRC-RDVPGVKIKCVR 160
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 37.5 bits (83), Expect = 0.082
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +3
Query: 15 RKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVA 194
RK RV+L GK +TA++P +G ++I+++ VLV G GR D PGVR+ +V+ A
Sbjct: 63 RKTARVRL-STGKVITAYIPGEG--HNIQQHSVVLVRG-GRS----QDCPGVRYHLVRGA 114
>UniRef50_UPI000023CDB9 Cluster: hypothetical protein FG09588.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG09588.1 - Gibberella zeae PH-1
Length = 1464
Score = 36.7 bits (81), Expect = 0.14
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +2
Query: 203 ASSSVQRKEGEAQVIGLHCDK*VTRCRRRE 292
A+S+V+RKE EAQ++ +H D + + RRRE
Sbjct: 730 ATSAVKRKEAEAQIVKIHFDHDIAKLRRRE 759
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 36.7 bits (81), Expect = 0.14
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVV 185
A+RK ++ L N K V A+VP + + I +N VL+ KG V D+PGV++KV+
Sbjct: 48 AVRKVIKTTL--NKKTVLAYVPGENVI--IPKNSRVLI-----KGGNVPDLPGVKYKVI 97
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 35.1 bits (77), Expect = 0.44
Identities = 22/59 (37%), Positives = 36/59 (61%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVV 185
A+RK V+L N + V A++P G + ++E+D VLV +G V D+PGV++ +V
Sbjct: 48 ALRKIATVRL-SNKRTVNAYIP--GEKHSVKEHDRVLV-----RGGQVPDLPGVKYHIV 98
>UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ankyrin repeat
protein - Entamoeba histolytica HM-1:IMSS
Length = 681
Score = 34.7 bits (76), Expect = 0.58
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +3
Query: 39 IKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 218
IK + V+ F+P + L ++ N+ V V +KG AVG I G R+ + +A +++ L
Sbjct: 544 IKKVRMVSDFMPEEEELLRLKSNEIVEVYWEHKKGWAVGGING-RYGMFPLAKGTIIPLS 602
Query: 219 KEKKERPRS 245
KE++++ S
Sbjct: 603 KEEQDKINS 611
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 34.7 bits (76), Expect = 0.58
Identities = 21/60 (35%), Positives = 38/60 (63%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 188
A+RK +V+L N + A++P +G ++++E+ VL+ G GR V D+PGV+F ++
Sbjct: 48 ALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRG-GR----VKDLPGVKFHCIR 99
>UniRef50_Q6K6D7 Cluster: Cell wall protein-like; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Cell wall protein-like -
Oryza sativa subsp. japonica (Rice)
Length = 398
Score = 33.9 bits (74), Expect = 1.0
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = -1
Query: 235 LSFFSLYR-ARSDTFATLTTLNLTPGMSPTAW-PLRPNPA 122
++F SL+R AR+ T++T +T SP+A PLRPNPA
Sbjct: 187 VAFGSLFRRARAPADVTISTSGITAARSPSASPPLRPNPA 226
>UniRef50_Q2GWF5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 659
Score = 33.5 bits (73), Expect = 1.3
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = -1
Query: 214 RARSDTFATLTTLNLT-PGMSPTAWPLRPNPA-TNTSSFSSMWLRQPS 77
R+ S T + L+LT P + P+A+PLRP PA T T +F L PS
Sbjct: 180 RSASTTSRSTNRLSLTLPIVPPSAYPLRPTPASTTTPAFPPTPLDTPS 227
>UniRef50_O05122 Cluster: Haemagglutinin; n=1; Mycoplasma
gallisepticum|Rep: Haemagglutinin - Mycoplasma
gallisepticum
Length = 703
Score = 33.1 bits (72), Expect = 1.8
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = -1
Query: 241 LGLSFFSLYRARSDTFATLTTLNLTPGMSPTAWPLRPNP 125
LG+ F + A S T AT+ TLN TP P P+ PNP
Sbjct: 13 LGIGSFVMLAAASCTSATIPTLNPTPNPEPKPDPM-PNP 50
>UniRef50_A4M3B3 Cluster: Cell surface receptor IPT/TIG domain
protein precursor; n=1; Geobacter bemidjiensis Bem|Rep:
Cell surface receptor IPT/TIG domain protein precursor -
Geobacter bemidjiensis Bem
Length = 297
Score = 33.1 bits (72), Expect = 1.8
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = -1
Query: 313 VHL*TRRLPAAAAGHSLITM*TYDLGLSFFSLYRARSDTFATLTTLNLTPGMSPTAWPLR 134
V L TR+LPA G+ L+T+ DL ++LY R D + P A L
Sbjct: 66 VFLGTRQLPATLVGNRLLTVELPDLPPGVYALYLKREDGSTSRAFNFALQPQKPVATSLS 125
Query: 133 PNPATNTSS 107
P+ T S+
Sbjct: 126 PDTVTACST 134
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 33.1 bits (72), Expect = 1.8
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 188
A RK RV+L NG V+A++P +G + +E+ V V G GR D+PGV++ V++
Sbjct: 76 AQRKACRVRLT-NGNVVSAYIPGEG--HDAQEHSIVYVRG-GR----CQDLPGVKYHVIR 127
Query: 189 VA 194
A
Sbjct: 128 GA 129
>UniRef50_A4IG42 Cluster: Zgc:162193 protein; n=11;
Clupeocephala|Rep: Zgc:162193 protein - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 912
Score = 32.7 bits (71), Expect = 2.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 205 SDTFATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSMWLRQP 80
+ TF+ + LNL+P WP++PN N S + W P
Sbjct: 867 AQTFSKVVNLNLSPFFKAWGWPIQPNTEQNLSHLPA-WSDHP 907
>UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1375, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 915
Score = 32.7 bits (71), Expect = 2.3
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 188
A+RK RV+L +G ++T ++P G ++ +E+ VLV G GR V D+P VR+ +V+
Sbjct: 181 ALRKVARVRLT-SGFEITTYIPGIG--HNSQEHFVVLVRG-GR----VKDLPNVRYHIVR 232
>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Oenothera hookeri
(Hooker's evening primrose)
Length = 188
Score = 32.7 bits (71), Expect = 2.3
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 188
A+ K +V+L N V A++P +G ++++E+ VLV G GR V D+PGV+F ++
Sbjct: 111 ALGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVLVRG-GR----VKDLPGVKFHCIR 162
>UniRef50_Q2G7F6 Cluster: Putative uncharacterized protein
precursor; n=2; Proteobacteria|Rep: Putative
uncharacterized protein precursor - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 339
Score = 32.3 bits (70), Expect = 3.1
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -1
Query: 202 DTFATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSMWLRQPSRGTNAVTF 53
D+ +T TT+ TP +PTA P P P +++S+ + P GT T+
Sbjct: 31 DSSSTATTVTPTPSPTPTATP-TPTPTATGTAYSTASVDCPYSGTYTGTY 79
>UniRef50_O44381 Cluster: Shar pei/DRhoGEF2; n=5; Drosophila
melanogaster|Rep: Shar pei/DRhoGEF2 - Drosophila
melanogaster (Fruit fly)
Length = 2559
Score = 31.9 bits (69), Expect = 4.1
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -1
Query: 193 ATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSM---WLRQPSRGTNA 62
ATLTT L P M P A + P PATN S+ SS+ LR P R A
Sbjct: 1925 ATLTTTPLAP-MLPIA-TVTPAPATNNSNVSSLTGVQLRNPQRDATA 1969
>UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S12 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 127
Score = 31.5 bits (68), Expect = 5.4
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 188
A+RK +V+L N V +P +G ++++E+ +L G GR V D+PGV++K V+
Sbjct: 51 ALRKVAKVRL-SNKTTVIVAIPGEG--HNLKEHAIILFRG-GR----VRDLPGVKYKAVR 102
Query: 189 VANVSLLALYKEKKERPR 242
+ L + K K R +
Sbjct: 103 -GVLDLAGVQKRKTARSK 119
>UniRef50_A7HJP3 Cluster: FeoA family protein; n=1; Fervidobacterium
nodosum Rt17-B1|Rep: FeoA family protein -
Fervidobacterium nodosum Rt17-B1
Length = 158
Score = 31.1 bits (67), Expect = 7.1
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 96 IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK 221
I E VL + K AVG +PGVR +V+K A + LYK
Sbjct: 11 IVEVKRVLPSDISPKLRAVGILPGVRIEVIKAAPMGDPRLYK 52
>UniRef50_Q7RZS2 Cluster: Putative uncharacterized protein
NCU00292.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU00292.1 - Neurospora crassa
Length = 717
Score = 31.1 bits (67), Expect = 7.1
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -1
Query: 286 AAAAGHSLITM*TYDLGLSFFSLYRARSDTFATLTTLNLTPGM-SPTAWPLRPNPATNTS 110
A +G L+ T+D G F S Y + ++ A L + +P + SP+ +P+ PNP +
Sbjct: 476 AGPSGIDLMMGITHDDGAPFIS-YPSTTNQTAYLLSQGFSPSLASPSLFPIPPNPNGTLA 534
Query: 109 SFSS 98
F+S
Sbjct: 535 LFNS 538
>UniRef50_Q2UEE1 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 425
Score = 31.1 bits (67), Expect = 7.1
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 175 NLTPGMSPTAWPLRPNPA-TNTSSFSSMWLRQP 80
+LT G PT LRP P+ TN S SS W+R+P
Sbjct: 116 SLTSG--PTPGQLRPGPSRTNDSRTSSEWMREP 146
>UniRef50_Q892C9 Cluster: Ethanolamine ammonia-lyase heavy chain;
n=23; Bacteria|Rep: Ethanolamine ammonia-lyase heavy
chain - Clostridium tetani
Length = 458
Score = 30.7 bits (66), Expect = 9.4
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -3
Query: 197 VCYLNHLKSDSRNVTN-SVAFTTESCN 120
VCY NH+K+D + N +V +T CN
Sbjct: 366 VCYTNHMKADQNDAENLAVLLSTAGCN 392
>UniRef50_Q5YL03 Cluster: Sensory box-like protein; n=2; Aeromonas
hydrophila|Rep: Sensory box-like protein - Aeromonas
hydrophila
Length = 314
Score = 30.7 bits (66), Expect = 9.4
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -2
Query: 336 SQFTHYK-MYTYKQDASRRRQRVTHLSQCKPMTWASP-SFLCTELEATRLLP 187
SQ H + Y+ + R + V++ +C TWASP L L A R++P
Sbjct: 24 SQLLHQADLAMYQAKRNGRSRIVSYSEECSAQTWASPEEMLARALRAGRIVP 75
>UniRef50_Q1YFR7 Cluster: Putative uncharacterized protein; n=1;
Aurantimonas sp. SI85-9A1|Rep: Putative uncharacterized
protein - Aurantimonas sp. SI85-9A1
Length = 133
Score = 30.7 bits (66), Expect = 9.4
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 44 ERQESDSIRAA*WLPQPH*GER*GVSCRIRS*RPRCW 154
ER E+D++R A W P+P E G R+ S +PR W
Sbjct: 76 ERAEADALRRALWTPEPFSTELFGQ--RMASPKPRSW 110
>UniRef50_A7CWP4 Cluster: Putative uncharacterized protein; n=1;
Opitutaceae bacterium TAV2|Rep: Putative uncharacterized
protein - Opitutaceae bacterium TAV2
Length = 415
Score = 30.7 bits (66), Expect = 9.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 166 PGMSPTAWPLRPNPATNTSSFSSMWLRQPSRGTNAVT 56
P +P+AW PAT +S+ ++ + +P G+ AVT
Sbjct: 249 PSPTPSAWTPAATPATTSSTTATTPMPRPPSGSTAVT 285
>UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 30.7 bits (66), Expect = 9.4
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +3
Query: 9 AIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 188
A RK +++L + + A++P G ++++E VLV+G GR D+PGVR+ ++K
Sbjct: 48 AQRKVAKLRL-STRRMIIAYIPGQG--HNLQEYSSVLVSG-GR----APDLPGVRYTLIK 99
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,582,933
Number of Sequences: 1657284
Number of extensions: 7623866
Number of successful extensions: 18892
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 18421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18872
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14444021678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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