Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_D02
         (412 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q47594 Cluster: Mannosyltransferase B; n=3; Enterobacte...    35   0.56 
UniRef50_Q7TPJ2 Cluster: Ac2-224; n=1; Rattus norvegicus|Rep: Ac...    34   0.98 
UniRef50_A4S6E5 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   3.0  
UniRef50_UPI000023DB68 Cluster: hypothetical protein FG00022.1; ...    32   4.0  
UniRef50_Q9I0R7 Cluster: Putative uncharacterized protein; n=6; ...    31   6.9  
UniRef50_Q8EZ78 Cluster: SET family protein; n=4; Leptospira|Rep...    31   6.9  
UniRef50_Q64V20 Cluster: Putative uncharacterized protein; n=1; ...    31   9.1  

>UniRef50_Q47594 Cluster: Mannosyltransferase B; n=3;
           Enterobacteriaceae|Rep: Mannosyltransferase B -
           Escherichia coli
          Length = 381

 Score = 35.1 bits (77), Expect = 0.56
 Identities = 23/84 (27%), Positives = 37/84 (44%)
 Frame = +2

Query: 95  PAACIVHRLDLLVLCFYKRFVICIPDYSINMKKLNMCTSLTDAMRVARR*PTVTDGDRQR 274
           P   + HRL+  V  F+   +   P+Y    +   M  SL +++  A+   TV+D  R  
Sbjct: 103 PNFYLPHRLERAVTTFHDISIFTCPEYHPKDRVRYMEKSLHESLDSAKLILTVSDFSRSE 162

Query: 275 PLTRYNIMGDRTCRSTYVCRSLYI 346
            +  +N   DR   +   C S YI
Sbjct: 163 IIRLFNYPADRIVTTKLACSSDYI 186


>UniRef50_Q7TPJ2 Cluster: Ac2-224; n=1; Rattus norvegicus|Rep:
           Ac2-224 - Rattus norvegicus (Rat)
          Length = 123

 Score = 34.3 bits (75), Expect = 0.98
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +1

Query: 196 KHVYVANGRDARRPTVTDSDRRRPTAT 276
           K +Y+      RRPT T+SD++RPTAT
Sbjct: 40  KAMYIGTTTRVRRPTATNSDQQRPTAT 66



 Score = 32.3 bits (70), Expect = 4.0
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +1

Query: 211 ANGRDARRPTVTDSDRRRPTAT 276
           A   D +RPT T+SD++RPTAT
Sbjct: 55  ATNSDQQRPTATNSDQQRPTAT 76



 Score = 32.3 bits (70), Expect = 4.0
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +1

Query: 211 ANGRDARRPTVTDSDRRRPTAT 276
           A   D +RPT T+SD++RPTAT
Sbjct: 65  ATNSDQQRPTATNSDQQRPTAT 86


>UniRef50_A4S6E5 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 596

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 22/42 (52%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
 Frame = +2

Query: 23  SPGLQESARGRY----QLEQEGARARDAPAACIVHRLDLLVL 136
           +PG  + A G Y    QLE+E ARARDA AA   H L LL L
Sbjct: 6   APGAPDDAGGGYDYAAQLEREPARARDARAA-FKHALPLLAL 46


>UniRef50_UPI000023DB68 Cluster: hypothetical protein FG00022.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG00022.1 - Gibberella zeae PH-1
          Length = 359

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +3

Query: 15  LVDPPGCRNRHEAGTSWSRRERARETHLPRAS-CID*TYSYYA 140
           +VD    +N H    SWS + R+R++++P AS C + TY++ A
Sbjct: 168 IVDKEVLQNNHWDLWSWSCQNRSRQSYIPWASLCTEMTYAFAA 210


>UniRef50_Q9I0R7 Cluster: Putative uncharacterized protein; n=6;
           Pseudomonas aeruginosa|Rep: Putative uncharacterized
           protein - Pseudomonas aeruginosa
          Length = 135

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 260 GDRQRPLTRYNIMGDRTCRSTYVCRSLYILWLCG 361
           G+    LT + ++G    R  Y+C SL ++W CG
Sbjct: 65  GEHAVALTLWGMVGVELVRLAYLCLSLVVVWRCG 98


>UniRef50_Q8EZ78 Cluster: SET family protein; n=4; Leptospira|Rep:
           SET family protein - Leptospira interrogans
          Length = 143

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 293 IMGDRTCRSTYVCRSLYILWLC 358
           I+ DRT  S+  C S Y+LW+C
Sbjct: 51  ILTDRTANSSKYCESKYLLWIC 72


>UniRef50_Q64V20 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides fragilis|Rep: Putative uncharacterized
           protein - Bacteroides fragilis
          Length = 114

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -3

Query: 278 VVAVGRRRSLSVTVGRRASRPLATYTCLIFSYLSNNQEYKSRISYKSIIRVSLVDARC 105
           +VAV    S+S  V       + +Y+C +F +LSNN E ++  +   ++R+ L   RC
Sbjct: 51  IVAVIMCVSISCVVEGNQMPLICSYSCFLFLFLSNN-ETRNDETINCMLRIRLRKLRC 107


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,083,867
Number of Sequences: 1657284
Number of extensions: 7953597
Number of successful extensions: 21686
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21672
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)