Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_D01
         (581 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiati...    26   1.0  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    26   1.0  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   7.2  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   9.5  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   9.5  

>U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiation
           factor protein.
          Length = 110

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +2

Query: 416 VHLRAVVRNGRKTAPLRTRTVLGDRLDVSSMIAGLTSSAAISTIIRKVPSVGD 574
           VH+R   RNGRKT  L T   L    D+  ++       A +  + + P  G+
Sbjct: 28  VHIRIQQRNGRKT--LTTVQGLSAEYDLKKIVRACKKEFACNGTVIEHPEYGE 78


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 422 LRAVVRNGRKTAPLRTRTVLGDRLDVSSMIAGLTSSAAISTIIRKVPS-VGDRG 580
           ++  VR   +  PL+   VLG R   + +   L+  A    ++++VP+ VG  G
Sbjct: 516 VQTAVRTDERYKPLKDHVVLGRRTSKALLRLTLSRKANAQYMLQQVPAIVGSAG 569


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 55  SKATFCLILLISFNMALV 2
           SK+ F   LLISF +ALV
Sbjct: 497 SKSLFMSTLLISFTLALV 514


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 448 AAVPHDGAEVDARCCDHSAVQAPCSSV 368
           A VPH      +R   HS+  A  SSV
Sbjct: 33  ADVPHSSTSQSSRRPQHSSTSASSSSV 59


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 448 AAVPHDGAEVDARCCDHSAVQAPCSSV 368
           A VPH      +R   HS+  A  SSV
Sbjct: 33  ADVPHSSTSQSSRRPQHSSTSASSSSV 59


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,437
Number of Sequences: 2352
Number of extensions: 9874
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)