Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_C20
(428 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 58 3e-09
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 58 4e-09
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 53 1e-07
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 48 4e-06
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 46 1e-05
07_03_0117 + 13589997-13590998 45 2e-05
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 45 2e-05
06_03_0691 + 23552437-23552914,23555168-23555953,23556045-235561... 42 2e-04
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 41 4e-04
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 41 4e-04
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 41 5e-04
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 40 0.001
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 40 0.001
01_01_1139 - 9024609-9024708,9024832-9024910,9025083-9025252,902... 38 0.005
04_04_0048 + 22351788-22352177,22353175-22353711 37 0.006
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 36 0.018
01_07_0083 + 40970890-40971015,40971886-40971994,40972679-409727... 33 0.074
03_01_0644 - 4719954-4720022,4720445-4720912,4721009-4721312,472... 32 0.23
05_04_0010 - 17132810-17132935,17133017-17133169,17133202-171332... 31 0.52
01_06_1308 - 36159406-36159536,36159642-36160616,36161117-361612... 30 0.69
03_01_0534 + 3996479-3997458,3997938-3998265 30 0.91
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 30 0.91
06_03_1450 + 30246702-30247346,30248603-30248689,30248789-302489... 29 1.2
06_01_0441 + 3130906-3131424,3131847-3132269 29 1.2
07_03_0982 + 23116343-23117089,23117227-23117313,23117424-231175... 29 1.6
03_06_0557 + 34704990-34705400,34706271-34706485,34707142-347073... 29 1.6
08_01_0108 - 791835-792398 29 2.1
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 29 2.1
12_01_0019 - 135627-135983,136564-136797,137118-137196,137268-13... 28 2.8
11_04_0307 + 16185405-16185713,16185847-16185942,16186626-161867... 28 2.8
11_01_0021 - 143576-143932,144434-144667,144988-145066,145138-14... 28 2.8
07_01_1210 - 11538233-11538349,11538532-11538612,11538697-115387... 28 2.8
02_01_0768 + 5736778-5737341,5737451-5737612,5738678-5738707 28 2.8
02_01_0403 - 2938242-2941334 28 2.8
09_04_0377 + 17086775-17088310 28 3.7
03_02_0776 + 11103195-11103812 28 3.7
03_02_0139 - 5844107-5844278,5844413-5844521,5844630-5844732,584... 28 3.7
02_02_0572 + 11667455-11670783,11672026-11672419 27 6.4
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 27 8.5
04_03_0927 + 20871487-20871903,20872667-20872812,20873204-208733... 27 8.5
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 27 8.5
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 58.0 bits (134), Expect = 3e-09
Identities = 33/54 (61%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = +1
Query: 265 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAEDQRYKGIVDAFVR 423
F DFL GG+SAAVSKTA APIERVKLL+Q Q + K + YKGI D F R
Sbjct: 82 FMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGR 135
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 57.6 bits (133), Expect = 4e-09
Identities = 31/54 (57%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +1
Query: 265 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAEDQRYKGIVDAFVR 423
F DF+ GG+SAAVSKTA APIER+KLL+Q Q + K YKGI D F R
Sbjct: 80 FMIDFMMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKSGRLSHPYKGIADCFGR 133
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 52.8 bits (121), Expect = 1e-07
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +1
Query: 262 AFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAEDQRYKGIVDAFVRI 426
A A DF GG +A V+KT AP+ERVKLLLQ Q + ++ + + Y+GI DAF R+
Sbjct: 23 AAAADFAMGGAAAVVAKTGAAPVERVKLLLQNQAEMLRRGSLTRPYRGIADAFGRV 78
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 47.6 bits (108), Expect = 4e-06
Identities = 19/32 (59%), Positives = 28/32 (87%)
Frame = +1
Query: 265 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 360
FAK+ +AGG++ A SKTA+AP+ER+K+LLQ +
Sbjct: 27 FAKEMIAGGVAGAFSKTAIAPLERLKILLQTR 58
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = +1
Query: 259 IAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQH 363
++ K AGG++ VS+TAVAP+ER+K+LLQVQ+
Sbjct: 41 LSICKSLFAGGVAGGVSRTAVAPLERMKILLQVQN 75
>07_03_0117 + 13589997-13590998
Length = 333
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/32 (59%), Positives = 27/32 (84%)
Frame = +1
Query: 262 AFAKDFLAGGISAAVSKTAVAPIERVKLLLQV 357
AFA++ +AGG++ V+KTAVAP+ERV L+ QV
Sbjct: 40 AFAREMVAGGVAGVVAKTAVAPLERVNLMRQV 71
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/32 (59%), Positives = 27/32 (84%)
Frame = +1
Query: 265 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 360
+AK+ +AGG + A +KTAVAP+ERVK+LLQ +
Sbjct: 29 YAKELIAGGAAGAFAKTAVAPLERVKILLQTR 60
>06_03_0691 +
23552437-23552914,23555168-23555953,23556045-23556135,
23556214-23556406
Length = 515
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/36 (47%), Positives = 29/36 (80%)
Frame = +1
Query: 253 RSIAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 360
+S+ +K +AGGI+ A S+TA AP++R+K+++QVQ
Sbjct: 228 KSVNASKYLIAGGIAGAASRTATAPLDRLKVIMQVQ 263
Score = 33.5 bits (73), Expect = 0.074
Identities = 13/41 (31%), Positives = 29/41 (70%)
Frame = +1
Query: 232 RTKCQSRRSIAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 354
++K +++ + ++ +AGG++ AV++TA+ P++ VK LQ
Sbjct: 316 KSKGENKSEVGPSERLVAGGLAGAVAQTAIYPVDLVKTRLQ 356
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 41.1 bits (92), Expect = 4e-04
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = +1
Query: 271 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 360
++ +AGG++ V+KTAVAP+ERVK+L Q +
Sbjct: 27 RELVAGGVAGGVAKTAVAPLERVKILFQAR 56
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 41.1 bits (92), Expect = 4e-04
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +1
Query: 268 AKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 360
+K +AGG+S A S+TA AP++R+K+++QVQ
Sbjct: 234 SKYLIAGGVSGATSRTATAPLDRLKVIMQVQ 264
Score = 34.3 bits (75), Expect = 0.042
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = +1
Query: 232 RTKCQSRRSIAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 354
++K +++ I + +AGG++ AV++TA+ PI+ VK LQ
Sbjct: 317 KSKGENKSDIGTSGRLMAGGLAGAVAQTAIYPIDLVKTRLQ 357
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 40.7 bits (91), Expect = 5e-04
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 265 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQ-IAEDQRYKGIVDAFVR 423
F +D +AG T VAPIER KLLLQ Q + + +R++G D R
Sbjct: 48 FERDLVAGAAMGGAVHTVVAPIERAKLLLQTQDGNAALLGRARRFRGFADCVAR 101
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 280 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIA 381
LAGG++ AVSKT AP+ R+ +L QVQ + +A
Sbjct: 41 LAGGVAGAVSKTCTAPLARLTILFQVQGMHSDVA 74
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 250 RRSIAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRY 396
RR I AGG + AVSKT AP+ R+ +L QV + +A ++Y
Sbjct: 3 RRHIGTVAHLAAGGFAGAVSKTCTAPLARLTILFQVAGMHSDVAALKKY 51
>01_01_1139 -
9024609-9024708,9024832-9024910,9025083-9025252,
9025339-9025451,9025518-9025586,9025867-9025944,
9026022-9026084,9026590-9026670,9027166-9027222,
9027352-9027705
Length = 387
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 277 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGI 405
F AG + AV+KT AP++RVKLL+Q V ++ + KGI
Sbjct: 93 FAAGAAAGAVAKTITAPLDRVKLLMQTHSV--RVVGESTKKGI 133
>04_04_0048 + 22351788-22352177,22353175-22353711
Length = 308
Score = 37.1 bits (82), Expect = 0.006
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 253 RSIAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRI 426
R + LAGG+S V++ +P + +K+ +Q RY GI DAF +I
Sbjct: 111 RDAGLLEKALAGGVSGVVAQVVASPADLIKVRMQADSRLLSQGIQPRYTGIFDAFTKI 168
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 35.5 bits (78), Expect = 0.018
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 271 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAE 384
K ++GGI+ AVS+TAVAP+E ++ L V AE
Sbjct: 136 KRLISGGIAGAVSRTAVAPLETIRTHLMVGSNGNSTAE 173
>01_07_0083 +
40970890-40971015,40971886-40971994,40972679-40972790,
40972944-40973100,40973609-40973761,40974143-40974292,
40974803-40974999,40975446-40975473
Length = 343
Score = 33.5 bits (73), Expect = 0.074
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 244 QSRRSIAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 360
Q RR++ D LAG IS +S+T +P++ +K+ QVQ
Sbjct: 9 QMRRALV---DALAGAISGGISRTVTSPLDVIKIRFQVQ 44
>03_01_0644 -
4719954-4720022,4720445-4720912,4721009-4721312,
4722321-4722745
Length = 421
Score = 31.9 bits (69), Expect = 0.23
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 271 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAE 384
K +G ++A VS+T VAP+ER+KL V+ + + E
Sbjct: 129 KHLWSGAVAAMVSRTVVAPLERLKLEYIVRAEQRNLFE 166
>05_04_0010 -
17132810-17132935,17133017-17133169,17133202-17133263,
17133384-17133435,17133794-17133883,17134075-17134170,
17134258-17134311,17134575-17134665,17134996-17135072,
17135770-17135852,17136057-17136111
Length = 312
Score = 30.7 bits (66), Expect = 0.52
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 280 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGI 405
+AGG + V +TA+ PI+ +K LQ QI Y G+
Sbjct: 22 IAGGTAGVVVETALYPIDTIKTRLQAARGGSQIQWKGLYSGL 63
>01_06_1308 -
36159406-36159536,36159642-36160616,36161117-36161245,
36161403-36161647,36161730-36161881,36161982-36162083
Length = 577
Score = 30.3 bits (65), Expect = 0.69
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 163 FFHSVCAEVLPCPQVSTQRGPHNRTKCQSRRSIAF 267
FF +V LPCP T +GP+N S +++F
Sbjct: 370 FFFTVGLGTLPCPANMTCQGPNNTQMAASMNNVSF 404
>03_01_0534 + 3996479-3997458,3997938-3998265
Length = 435
Score = 29.9 bits (64), Expect = 0.91
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 283 AGGISAAVSKTAV-APIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRI 426
AGG+SAA++ V P++ + L VQ S RY+G VDAF +I
Sbjct: 138 AGGVSAAIAAQVVWTPVDVISQRLMVQTSSTC-----RYRGGVDAFKKI 181
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 29.9 bits (64), Expect = 0.91
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 177 VCRSPSLSASIHPKRTT*SN---KMSISPIHRVRQRLSGWRYLRRRLQDSRSAHRARQIA 347
+ RSP P R+ N +S SP+ ++ +S R R R SRSA R+
Sbjct: 577 ISRSPDRPYRRIPSRSPRKNTRRSISRSPVRLSKRSISPVRGGRSRRSVSRSASPPRRAI 636
Query: 348 APSPARQQTDRRGPTLQGYRR 410
+P+ ++ R P+ G +R
Sbjct: 637 SPAQNHGRSPSRSPSPDGSKR 657
>06_03_1450 +
30246702-30247346,30248603-30248689,30248789-30248920,
30249016-30249162,30250375-30250440,30250519-30250629,
30251551-30251584,30251667-30251743,30251829-30251906
Length = 458
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 266 NAMDRRD*HFVRLCGPLWVDTCGQGRTSAHTE 171
+A +RR H R CG ++ D C QGRT T+
Sbjct: 354 SAFNRR--HHCRNCGDIFCDKCTQGRTPLTTD 383
>06_01_0441 + 3130906-3131424,3131847-3132269
Length = 313
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 200 GQGRTSAHTEWKNHEKRTPDF*SGDLELFRDHRSTRGR 87
GQGR S H W H T +GD+++ H + GR
Sbjct: 33 GQGRASVHAAWTVH---THHLNAGDVDILMLHSAANGR 67
>07_03_0982 +
23116343-23117089,23117227-23117313,23117424-23117555,
23118135-23118269,23118644-23118709,23118797-23118907,
23119237-23119329,23119555-23119659,23119752-23119829
Length = 517
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 242 HFVRLCGPLWVDTCGQGRTSAHTE 171
H R CG ++ D C QGRT+ E
Sbjct: 390 HHCRNCGEIFCDKCSQGRTALTAE 413
>03_06_0557 +
34704990-34705400,34706271-34706485,34707142-34707367,
34707447-34707532,34708030-34708121,34708232-34708471,
34709455-34709750
Length = 521
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = -2
Query: 196 KEGLRHTRNGKTTKNEPPIFNQEIWSYFVITGALGVGVCLF*NSIDHVLSQF 41
K L+ R G T P +++W F A G GV L N D V +
Sbjct: 137 KTSLKMWRTGDCTNTSPYFCLEDLWESFREWSAYGAGVPLLLNGSDSVTQYY 188
>08_01_0108 - 791835-792398
Length = 187
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +3
Query: 270 QRLSGWRYLRRRLQDSRSAHRARQIAAPSPARQQTDRRGPTLQGYRRRLR 419
+R S WR LRR + + RA + A R RR T Q RR R
Sbjct: 80 ERRSSWRRLRRPRRRGGARGRAEVVVAGKRRRSWRRRRSRTRQRRRRSRR 129
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 280 LAGGISAAVSKTAVAPIERVKLLLQV 357
++G ++ AVS+T VAP+E ++ L V
Sbjct: 141 VSGAVAGAVSRTCVAPLETIRTHLMV 166
>12_01_0019 -
135627-135983,136564-136797,137118-137196,137268-137383,
137847-137991,138177-138594,138644-138649,139315-139945
Length = 661
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 271 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVS 369
K LAGG+++A+S + + PI+ +K +Q +S
Sbjct: 377 KSALAGGLASALSTSVMHPIDSMKTRVQASSLS 409
>11_04_0307 +
16185405-16185713,16185847-16185942,16186626-16186730,
16186938-16187090,16188395-16188478,16188566-16188694,
16188986-16189165,16189555-16189677,16189678-16189794,
16189889-16190053
Length = 486
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 270 GERDGSARLTFCSIMWSSLGGYLRTRKDFGTHGMEKPR 157
G DG A + ++W L GYL T + F H +EK R
Sbjct: 121 GVPDGGAAVR--PLVWKLLLGYLPTERAFWPHELEKKR 156
>11_01_0021 -
143576-143932,144434-144667,144988-145066,145138-145253,
145717-145861,146048-146465,147206-147869
Length = 670
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 271 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVS 369
K LAGG+++A+S + + PI+ +K +Q +S
Sbjct: 386 KSALAGGLASALSTSVMHPIDSMKTRVQASSLS 418
>07_01_1210 -
11538233-11538349,11538532-11538612,11538697-11538758,
11539108-11539159,11539779-11539868,11539957-11540052,
11540127-11540180,11540314-11540404,11540731-11540807,
11541089-11541171,11541441-11541492
Length = 284
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 280 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGI 405
+AGG + V +TA+ PI+ +K LQ +I Y G+
Sbjct: 21 IAGGAAGVVVETALYPIDTIKTRLQAAKGGSKIQWKGLYAGL 62
>02_01_0768 + 5736778-5737341,5737451-5737612,5738678-5738707
Length = 251
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 280 LAGGISAAVSKTAVAPIERVKLLLQV 357
++G I+ AVS+T VAP+E ++ L V
Sbjct: 132 VSGAIAGAVSRTFVAPLETIRTHLMV 157
>02_01_0403 - 2938242-2941334
Length = 1030
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 233 RLCGPLWVDTCGQGRTSAHTEWKNHEK 153
+LCGP+ V CG +TS + K H K
Sbjct: 640 KLCGPMLVHHCGSDKTS-YVSKKRHNK 665
>09_04_0377 + 17086775-17088310
Length = 511
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 330 RARQIAAPSPARQQTDRRGPTLQGYRRRLRPHS 428
R+R A+PSP R+++ R P+ + RRR R S
Sbjct: 17 RSRVSASPSPRRRRSPSRSPSPRRNRRRDRSPS 49
>03_02_0776 + 11103195-11103812
Length = 205
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = +3
Query: 186 SPSLSASIHPK----RTT*SNKMSISPIHRVRQRLSGWRYLRRRLQDSRSAHRARQIAAP 353
SPS SA+ P+ R +++S R R + RRR+Q +R A I+ P
Sbjct: 63 SPSSSAAAPPRSRAVREAADRALAVSARGRTRWSRAILASHRRRIQAARRARLREAISPP 122
Query: 354 SPARQQTDRRGPTLQGYRRRLR 419
S + +GP R+ +
Sbjct: 123 SRHPSSSSGKGPKAPALARKAK 144
>03_02_0139 -
5844107-5844278,5844413-5844521,5844630-5844732,
5844834-5844865,5845211-5845434,5845774-5845889,
5845997-5846252,5846720-5846807,5846891-5846962,
5847096-5847171,5847302-5847360,5848202-5848268,
5848760-5848825,5850466-5850657
Length = 543
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 262 AFAKDFLAGGISAAVSKTAVA----PIERVKLLLQVQHVSKQIAEDQRYKGIVDAF 417
+F + F+ G SAA + +VA PI K +++V + ED R + I D F
Sbjct: 49 SFPEGFVFGTASAAYQRCSVAPDELPIHTAKAVIEVFEYEGAVKEDGRGQTIWDTF 104
>02_02_0572 + 11667455-11670783,11672026-11672419
Length = 1240
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 303 RLQDSRSAHRARQIAAPSPARQQTDRR 383
RL+ R A A AAP+PAR RR
Sbjct: 124 RLELERDAEEAAATAAPAPARDDRGRR 150
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 26.6 bits (56), Expect = 8.5
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +3
Query: 261 RVRQRLSGWRYLRRRLQDSRSAHRARQIAAPSPARQQTDRRGPTLQGYRRRLRPHS 428
R R R+SG R + SRS + SP R + R P+ + RRR+R S
Sbjct: 128 RSRDRISGSRGRSYDQRYSRSPRYSPPPRGRSPYRSPSYSRSPSPRYARRRMRERS 183
>04_03_0927 + 20871487-20871903,20872667-20872812,20873204-20873301,
20873378-20873572,20873670-20873797,20873892-20874050,
20875119-20875223,20875449-20875559,20875653-20875790,
20875909-20876091,20876362-20876517,20876615-20876738,
20876820-20877030,20877614-20877729,20877828-20878053,
20878218-20878311,20879198-20879275,20879822-20879971,
20880086-20880292,20880584-20880788,20880990-20881096
Length = 1117
Score = 26.6 bits (56), Expect = 8.5
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 321 SAHRARQIAAPSPARQQTDRRG 386
+ H+ Q+++PS RQQT++RG
Sbjct: 1065 ATHQPVQVSSPSFRRQQTNKRG 1086
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -1
Query: 242 HFVRLCGPL-W-VDTCGQGRTSAHTEWKNHEK 153
HF R G W D CG+ R + H++WK H K
Sbjct: 154 HFCRKHGEKKWKCDRCGK-RYAVHSDWKAHSK 184
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,209,825
Number of Sequences: 37544
Number of extensions: 278858
Number of successful extensions: 916
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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