Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_C19
         (411 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   2.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   4.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   5.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   5.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   5.4  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    20   9.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   9.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   9.5  

>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 150 TYFNNFFAFLPTIFTWHF 97
           +Y ++ FA + TIF W F
Sbjct: 206 SYNSDIFAMIGTIFLWLF 223


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 100 VPRKNGRKERKKVVKICERTYTYSFK 177
           V R+   KER     +CER + +S K
Sbjct: 137 VHRRIHTKERPYKCDVCERAFEHSGK 162


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +2

Query: 101 CHVKMVGRNAKKLLKYVSELTPIHSRNYGTAKRVLAT 211
           C   ++   A  L +Y +   PI+     T KRVLAT
Sbjct: 120 CTASILNLCAIALDRYWAITDPINYAQKRTLKRVLAT 156


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +2

Query: 101 CHVKMVGRNAKKLLKYVSELTPIHSRNYGTAKRVLAT 211
           C   ++   A  L +Y +   PI+     T KRVLAT
Sbjct: 120 CTASILNLCAIALDRYWAITDPINYAQKRTLKRVLAT 156


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +2

Query: 101 CHVKMVGRNAKKLLKYVSELTPIHSRNYGTAKRVLAT 211
           C   ++   A  L +Y +   PI+     T KRVLAT
Sbjct: 120 CTASILNLCAIALDRYWAITDPINYAQKRTLKRVLAT 156


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = +1

Query: 106 RKNGRKERKKVVKICERTYTYSFKKLWNSKEGF 204
           R+  R +  K+V      Y YS    +N+   +
Sbjct: 71  RERERSKEPKIVSSLSNNYNYSNYNNYNNNNNY 103


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 2   HDVIVYIGGATCALIWHVEIVALTFNRVELF 94
           +++I +IG  T   +  +EI+ L+ NR+  F
Sbjct: 875 NNLIGFIGNLTFLPLRSLEILRLSGNRLVTF 905


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 149 VSELTPIHSRNYGTAKRVLA 208
           +  L+P H+ NY    R LA
Sbjct: 672 IEHLSPDHNGNYSCVARNLA 691


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,546
Number of Sequences: 438
Number of extensions: 2218
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)