Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_C18
(615 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 287 4e-78
03_01_0547 + 4093196-4093657,4094267-4095148 287 4e-78
03_01_0544 + 4082528-4082989,4083585-4084466 287 4e-78
03_01_0543 + 4076981-4077442,4078145-4079026 287 4e-78
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 136 1e-32
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 135 2e-32
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 134 7e-32
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 121 5e-28
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 121 5e-28
02_04_0462 + 23131433-23132836 73 1e-13
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 71 6e-13
03_03_0053 + 14109636-14109948,14110075-14110302,14112030-141121... 30 1.7
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 30 1.7
03_03_0230 - 15623648-15623653,15624333-15624383,15624477-156245... 29 2.2
10_01_0204 + 2199778-2200835,2201212-2201311 29 3.9
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 29 3.9
03_04_0206 - 18493178-18495310 29 3.9
12_01_0346 + 2652181-2653566 28 5.1
11_06_0226 + 21461174-21462018,21462508-21464439,21464746-21464845 28 5.1
06_03_1231 + 28580006-28580934,28581810-28582086 28 5.1
03_02_0443 + 8538938-8539069,8540635-8540859,8541386-8541523 28 5.1
02_02_0101 - 6788090-6788356,6788770-6788940 28 5.1
09_04_0094 - 14552970-14553182,14553275-14553679,14553780-145539... 28 6.8
03_03_0225 - 15587557-15588774 28 6.8
02_04_0630 - 24600242-24600839,24600948-24601077,24601659-24601800 28 6.8
01_02_0020 - 10269252-10269314,10269442-10269483,10269759-102702... 28 6.8
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 27 8.9
02_05_1276 + 35397948-35398298,35398937-35401738,35402085-354023... 27 8.9
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 287 bits (705), Expect = 4e-78
Identities = 140/201 (69%), Positives = 162/201 (80%)
Frame = +2
Query: 11 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 190
GTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+
Sbjct: 105 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK 164
Query: 191 SRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAE 370
+R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 165 ARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------ 212
Query: 371 GKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPAN 550
G L+EALD I P RP+DK LRLPLQDVYKIGGIGTVPVGRVETG+LKPG VV F P+
Sbjct: 213 GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 272
Query: 551 ITTEVKSVEMHHEALQEAVPG 613
+TTEVKSVEMHHEALQEA+PG
Sbjct: 273 LTTEVKSVEMHHEALQEALPG 293
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 287 bits (705), Expect = 4e-78
Identities = 140/201 (69%), Positives = 162/201 (80%)
Frame = +2
Query: 11 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 190
GTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+
Sbjct: 105 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK 164
Query: 191 SRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAE 370
+R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 165 ARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------ 212
Query: 371 GKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPAN 550
G L+EALD I P RP+DK LRLPLQDVYKIGGIGTVPVGRVETG+LKPG VV F P+
Sbjct: 213 GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 272
Query: 551 ITTEVKSVEMHHEALQEAVPG 613
+TTEVKSVEMHHEALQEA+PG
Sbjct: 273 LTTEVKSVEMHHEALQEALPG 293
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 287 bits (705), Expect = 4e-78
Identities = 140/201 (69%), Positives = 162/201 (80%)
Frame = +2
Query: 11 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 190
GTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+
Sbjct: 105 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK 164
Query: 191 SRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAE 370
+R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 165 ARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------ 212
Query: 371 GKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPAN 550
G L+EALD I P RP+DK LRLPLQDVYKIGGIGTVPVGRVETG+LKPG VV F P+
Sbjct: 213 GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 272
Query: 551 ITTEVKSVEMHHEALQEAVPG 613
+TTEVKSVEMHHEALQEA+PG
Sbjct: 273 LTTEVKSVEMHHEALQEALPG 293
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 287 bits (705), Expect = 4e-78
Identities = 140/201 (69%), Positives = 162/201 (80%)
Frame = +2
Query: 11 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 190
GTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+
Sbjct: 105 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK 164
Query: 191 SRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAE 370
+R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 165 ARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------ 212
Query: 371 GKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPAN 550
G L+EALD I P RP+DK LRLPLQDVYKIGGIGTVPVGRVETG+LKPG VV F P+
Sbjct: 213 GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 272
Query: 551 ITTEVKSVEMHHEALQEAVPG 613
+TTEVKSVEMHHEALQEA+PG
Sbjct: 273 LTTEVKSVEMHHEALQEALPG 293
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 136 bits (329), Expect = 1e-32
Identities = 79/203 (38%), Positives = 113/203 (55%), Gaps = 1/203 (0%)
Frame = +2
Query: 8 AGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYS 187
+G SQAD VL+++A GEFE G + GQTREH LLA TLGV +L+V +NKMD + +S
Sbjct: 50 SGASQADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGVSKLVVVINKMDESTVGWS 109
Query: 188 ESRFEEIKKEVSSYIKKIGYN-PAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGK 364
+ R++EI+ ++ ++K GYN V F+PISG G NM K W
Sbjct: 110 KERYDEIEGKMVPFLKSSGYNVKKDVHFLPISGLLGTNMKTRMDKSN-CSWW-------- 160
Query: 365 AEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAP 544
G CL E LD I P R +R+P+ D YK +GTV +G++E+G + G ++ P
Sbjct: 161 -SGPCLFEVLDCIQVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTISEGDNMLVMP 217
Query: 545 ANITTEVKSVEMHHEALQEAVPG 613
+V SV + ++ A PG
Sbjct: 218 NKANVKVISVHCDEDRVRSAAPG 240
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 135 bits (327), Expect = 2e-32
Identities = 75/205 (36%), Positives = 118/205 (57%), Gaps = 3/205 (1%)
Frame = +2
Query: 8 AGTSQADCAVLIVAAGTGEFEAGISKNG--QTREHALLAFTLGVKQLIVGVNKMDSTEPP 181
+G +Q+D A+L++ A G FEAG+ NG QT+EH+ L + GV LIV VNKMDS E
Sbjct: 331 SGATQSDAAILVIDASIGSFEAGMGINGIGQTKEHSQLVRSFGVDNLIVVVNKMDSVE-- 388
Query: 182 YSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEG 361
YS+ RF IK ++ ++++ GY +AVA+VPIS +N++ ++ W
Sbjct: 389 YSKERFNFIKSQLGAFLRSCGYKDSAVAWVPISAMENENLMTTASDTR-LSSWY------ 441
Query: 362 KAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPV-GRVETGILKPGTVVVF 538
+G CL++A+D + PP+R K LRLP+ DV+ +G V + G+VE G + G+ ++
Sbjct: 442 --DGNCLLKAIDTLPPPSRDVSKPLRLPICDVFSSHKLGQVAIGGKVEVGATRSGSKILV 499
Query: 539 APANITTEVKSVEMHHEALQEAVPG 613
P VK++E + + A G
Sbjct: 500 MPFGELAVVKTIERNSSSCNLARAG 524
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 134 bits (323), Expect = 7e-32
Identities = 77/202 (38%), Positives = 112/202 (55%), Gaps = 1/202 (0%)
Frame = +2
Query: 8 AGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYS 187
+G SQAD VL+++A GEFE G K GQTREH LLA TLGV +LIV +NKMD +S
Sbjct: 95 SGASQADIGVLVISARKGEFETGYEKGGQTREHVLLAKTLGVAKLIVVINKMDEPTVKWS 154
Query: 188 ESRFEEIKKEVSSYIKKIGYN-PAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGK 364
+ R++EI+ ++ +++ GYN V F+PISG G NM K W
Sbjct: 155 KERYDEIESKMVPFLRSSGYNVKKDVHFLPISGLLGSNMKTRMDKS--ICSWW------- 205
Query: 365 AEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAP 544
+G CL E LD I P R +R+P+ D YK +GTV +G++E+G ++ G ++ P
Sbjct: 206 -DGPCLFEVLDCIEVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTIREGDSLLVMP 262
Query: 545 ANITTEVKSVEMHHEALQEAVP 610
+V + + ++ A P
Sbjct: 263 NKTNVKVIGISLDEHKVRRAGP 284
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 121 bits (291), Expect = 5e-28
Identities = 71/196 (36%), Positives = 113/196 (57%), Gaps = 6/196 (3%)
Frame = +2
Query: 8 AGTSQADCAVLIVAAGTGEFEAGISKNG-----QTREHALLAFTLGVKQLIVGVNKMDST 172
+G +QAD A+L+V A TG FEAG+ G QT+EHA L + GV+QLIV VNKMD+
Sbjct: 344 SGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI 403
Query: 173 EPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVER 352
YS+ RFE IK ++ S+++ + ++V ++P+S N+++ + + W
Sbjct: 404 --GYSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVR-LTSWY--- 457
Query: 353 KEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGT-VPVGRVETGILKPGTV 529
+G CL++A+D++ P+R K L LP+ DV K G G++ETG ++ G+
Sbjct: 458 -----QGFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSK 512
Query: 530 VVFAPANITTEVKSVE 577
V+ +P VKS+E
Sbjct: 513 VLISPCGEVAAVKSIE 528
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 121 bits (291), Expect = 5e-28
Identities = 71/196 (36%), Positives = 113/196 (57%), Gaps = 6/196 (3%)
Frame = +2
Query: 8 AGTSQADCAVLIVAAGTGEFEAGISKNG-----QTREHALLAFTLGVKQLIVGVNKMDST 172
+G +QAD A+L+V A TG FEAG+ G QT+EHA L + GV+QLIV VNKMD+
Sbjct: 344 SGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI 403
Query: 173 EPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVER 352
YS+ RFE IK ++ S+++ + ++V ++P+S N+++ + + W
Sbjct: 404 --GYSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVR-LTSWY--- 457
Query: 353 KEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGT-VPVGRVETGILKPGTV 529
+G CL++A+D++ P+R K L LP+ DV K G G++ETG ++ G+
Sbjct: 458 -----QGFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSK 512
Query: 530 VVFAPANITTEVKSVE 577
V+ +P VKS+E
Sbjct: 513 VLISPCGEVAAVKSIE 528
>02_04_0462 + 23131433-23132836
Length = 467
Score = 73.3 bits (172), Expect = 1e-13
Identities = 63/204 (30%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Frame = +2
Query: 11 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 190
G +Q D A+L+V+ G QT+EH LLA +GV +++V +NK D + E
Sbjct: 153 GAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPKIVVFLNKKDQVD---DE 202
Query: 191 SRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAE 370
+ ++ EV + Y+ V PI LE P K E +G
Sbjct: 203 ELLQLVELEVRELLSSYEYDGDEV---PIVAGSALKALENLMANPAIKRGDDEWVDGIFS 259
Query: 371 GKCLIEALDAILP-PARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPA 547
LI+++D +P P R TD L ++DV+ I G GTV GR+E G +K G V
Sbjct: 260 ---LIDSVDNYIPVPQRQTDLPFLLAVEDVFSITGRGTVATGRIERGTVKVGDTVDIVGI 316
Query: 548 NITTE--VKSVEMHHEALQEAVPG 613
T V VEM + + +A+ G
Sbjct: 317 RETRNCTVTGVEMFQKTMDDAMAG 340
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 71.3 bits (167), Expect = 6e-13
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 5/206 (2%)
Frame = +2
Query: 11 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 190
G +Q D +L+V+A G QT+EH LLA +GV L+ +NK+D+ + P
Sbjct: 150 GAAQMDGGILVVSAPDGPMP-------QTKEHILLARQVGVPSLVCFLNKVDAVDDPELL 202
Query: 191 SRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAE 370
E +E+ S+ K G + +S G N + GK
Sbjct: 203 ELVEMELRELLSFYKFPGDEIPIIRGSALSALQGTN-----------------DEIGKNA 245
Query: 371 GKCLIEALDAILP-PARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPG---TVVVF 538
L++A+D +P P R DK+ +P++DV+ I G GTV GRVE G +K G ++
Sbjct: 246 ILKLMDAVDEYIPDPVRQLDKSFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGEDVEILGL 305
Query: 539 APAN-ITTEVKSVEMHHEALQEAVPG 613
P+ + T V VEM + L G
Sbjct: 306 TPSGPLKTTVTGVEMFKKILDHGEAG 331
>03_03_0053 +
14109636-14109948,14110075-14110302,14112030-14112181,
14112305-14112578,14112687-14112739
Length = 339
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -3
Query: 430 LVSGASRRKDGVEGLNKAFTFSLSFF-TLNQPSLEPWHFGGRLQHVISVPAR-NGYESDG 257
L +GA DG + F+F S T N ++ P RL + + R G SDG
Sbjct: 39 LATGAGG-DDGFSCFTRMFSFGDSITDTGNSATISPNASFNRLPYGETFFGRPTGRYSDG 97
Query: 256 SRIVTNFLDVGRDFLLDFLKSRLTV 182
IV ++G FL FL+ R TV
Sbjct: 98 RLIVDFLAELGLPFLTPFLRGRETV 122
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +2
Query: 161 MDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAV------AFVPISGWHGDNMLEPSTK 319
M STEP + + + EV IKK+GYN + A+ G+H N PS++
Sbjct: 322 MSSTEPKINT--YANFRDEVLPRIKKLGYNAVQIMAIQEHAYYGSFGYHVTNFFAPSSR 378
>03_03_0230 -
15623648-15623653,15624333-15624383,15624477-15624546,
15624646-15624848,15625011-15625116,15625228-15625295,
15625410-15625453,15628360-15628602,15629482-15629691,
15630207-15630287,15630289-15630355,15632167-15632386,
15632534-15632646,15634322-15634416,15634509-15634629
Length = 565
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 447 RGR-RRALSVGRAGGRMASRASIRHLPSAFPSLRSTNHPLNH 325
RGR RA G AGG+ RA I+ LP P+L+ + PL H
Sbjct: 313 RGRPERAGDDGLAGGQGRRRAHIKALPDEIPALKCS--PLYH 352
>10_01_0204 + 2199778-2200835,2201212-2201311
Length = 385
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -1
Query: 504 VSTLPTGTVP-IPPILYTSCRGRRRALSVGRAGGRMASRASIRHLPSAFPSLRSTNHP 334
+S +P +V + + S R RRR ++ RAG R+ SRA +R PS S+ HP
Sbjct: 202 ISFVPCPSVSSVRSAIVFSARRRRRQSAIARAGARV-SRAGVR--PSPASSILVGVHP 256
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = -1
Query: 507 PVSTLPTGTVPIPP----ILYTSCRGRR-RALSVGRAGGRMASRASIRHLPSA 364
P S++ G P P L T CRGR R + RAG R+ SRA +R P++
Sbjct: 288 PASSILVGVHPHRPPSSLSLSTLCRGRGGRESATARAGARV-SRAGVRPSPAS 339
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -3
Query: 274 GYESDGSRIVTNF---LDVGRDFLLDFLKSRLTVWWLSGVHFVYSYNQLLDS 128
G E G RIV +D R+ +L+ L VW G+HFVY + L++
Sbjct: 212 GQELAGVRIVEPLRRCMDRARE-ILEIKTGGLVVWTRGGIHFVYRGSSYLEN 262
>03_04_0206 - 18493178-18495310
Length = 710
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 152 VNKMDSTEPPYSESRFEEIKKEV 220
VNK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
>12_01_0346 + 2652181-2653566
Length = 461
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 405 RMASRASIRHLPSAFPSLRSTNHPLNHGILVDGSNML 295
RMA ++R + P+ + +H L+HG L DG N+L
Sbjct: 201 RMAGLTTVRIIDE--PTAAAVSHGLHHGRLRDGGNVL 235
>11_06_0226 + 21461174-21462018,21462508-21464439,21464746-21464845
Length = 958
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 386 EALDAILPPARPTDKALR-LPLQDVYKIGGIGTVPVGRVETGILK-PGTVVVFAPANITT 559
+A D ++ D+AL+ L + V +IGG+G + +V +LK F P +
Sbjct: 180 KARDDLMKRLSVGDEALKKLKMVSVVRIGGLGKTTLSKVVFDMLKLQFDCAAFVPVGQSP 239
Query: 560 EVKSV 574
E+K V
Sbjct: 240 EIKKV 244
>06_03_1231 + 28580006-28580934,28581810-28582086
Length = 401
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 222 LPTSRKLVTIRLPSLSYPFLAGTEITCWSRPPKCHGSRDGWLSVKKERLKVN 377
LP + K+ TI + L + + P C G GW+ + + RL +N
Sbjct: 79 LPANMKVSTIAVAPLDSIHIVAPNVNNRPSCPLCRGDVIGWIVIGEARLHLN 130
>03_02_0443 + 8538938-8539069,8540635-8540859,8541386-8541523
Length = 164
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 134 KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EP 310
+ L+V + D+T+ SES +I K++ + KKI A V P +N+ E
Sbjct: 85 ESLVVATSSTDATDNSKSESSAPDIDKKIRALKKKIRLAEAQVQGDP------ENLKPEQ 138
Query: 311 STKMPWFKGWLVERK 355
KM +GW E K
Sbjct: 139 LEKMKKIEGWKEELK 153
>02_02_0101 - 6788090-6788356,6788770-6788940
Length = 145
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +3
Query: 228 TSRKLVTIRLPSLSYPFLAGTEITCWSRPPKCHGSRDGWLSVKKERLKVNALLRPSTPSF 407
TS + V R P+ P AGTE+T + +R ++ +E + P S
Sbjct: 9 TSPRQVAARSPADHIPAAAGTEVTARATTAMEASAR----TIAEEAVVRAPSANPYNSSE 64
Query: 408 RLLAPLTRLSVFP 446
R L PL R + FP
Sbjct: 65 RCLLPLARPNCFP 77
>09_04_0094 -
14552970-14553182,14553275-14553679,14553780-14553902,
14554156-14554367,14554486-14554514,14554661-14555166
Length = 495
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 149 GVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 283
G + + PP +++ +E ++ VSS+ G AA A VP G
Sbjct: 43 GTSSSTAAAPPPTDAALQEFRRWVSSHGADAGAGAAAPAAVPEGG 87
>03_03_0225 - 15587557-15588774
Length = 405
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 511 PKAWYCCRFCPC*HHY*SQVRGNAPRGSTRSCTR 612
P+ W C FC H Y ++ G A + SC +
Sbjct: 167 PEFWTACPFCSYVHQYQRELVGRALKCPNESCRK 200
>02_04_0630 - 24600242-24600839,24600948-24601077,24601659-24601800
Length = 289
Score = 27.9 bits (59), Expect = 6.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 440 DGEPCQWGEQAEGWRRGP 387
+G+ WG + GWR+GP
Sbjct: 2 EGQQFAWGREEGGWRKGP 19
>01_02_0020 -
10269252-10269314,10269442-10269483,10269759-10270244,
10270338-10270421,10270491-10270556,10270718-10270810,
10270901-10271987,10273338-10273362,10273881-10273899
Length = 654
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 534 TTTVPGFRIPVSTLPTGTVPIPPILYTSCRGRR-RALSVGRAGGRMAS 394
T+T+P F +P T+P+ +PP + S G R V + G MA+
Sbjct: 538 TSTMPMFGVPGQTIPSSASSVPP--FASLAGLPVRPSGVPQVSGAMAN 583
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 339 HPLNHGILVDGSNMLSPCQPEMGTKATAAG 250
HP + +L G N L+ C P + AT AG
Sbjct: 258 HPSLNQLLGVGDNFLAECYPSTASTATVAG 287
>02_05_1276 + 35397948-35398298,35398937-35401738,35402085-35402306,
35402503-35402562,35402615-35402698,35402740-35402816,
35403147-35403363
Length = 1270
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 343 QPSLEPWHFGGRLQHVISVPARN 275
QP L W GG ++SVPA N
Sbjct: 1108 QPELTAWLVGGTALQIVSVPALN 1130
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,566,750
Number of Sequences: 37544
Number of extensions: 426733
Number of successful extensions: 1648
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1626
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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