Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_C17
         (460 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   2.1  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    22   3.7  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    22   3.7  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   4.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   6.4  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/41 (26%), Positives = 15/41 (36%)
 Frame = +1

Query: 250 ELQAGHTGRLRPHDQHVPADAQAVQRRHHESARQVHGGDSC 372
           +L+ G       H QH  A  Q  Q+      +    GD C
Sbjct: 12  DLRNGGVEHPHQHQQHYGAAVQVPQQTQSVQQQSQQAGDPC 52


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = +2

Query: 77  ALEEQRRLRAELQADVGE--CRGRAAELQSQLEEVAAQLGDARIDKHEEARRRKKQEIVE 250
           AL +QR LR +L+  +GE  C      L+S    V    G       EE R+ KK  ++ 
Sbjct: 41  ALSDQRYLRRQLKCALGEAPCDPVGRRLKSLAPLVLR--GACPQCSPEETRQIKK--VLS 96

Query: 251 SFKRDIPGVYDRMI 292
             +R  P  + +++
Sbjct: 97  HIQRTYPKEWSKIV 110


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = +2

Query: 77  ALEEQRRLRAELQADVGE--CRGRAAELQSQLEEVAAQLGDARIDKHEEARRRKKQEIVE 250
           AL +QR LR +L+  +GE  C      L+S    V    G       EE R+ KK  ++ 
Sbjct: 41  ALSDQRYLRRQLKCALGEAPCDPVGRRLKSLAPLVLR--GACPQCSPEETRQIKK--VLS 96

Query: 251 SFKRDIPGVYDRMI 292
             +R  P  + +++
Sbjct: 97  HIQRTYPKEWSKIV 110


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 101 RAELQADVGECRGRA 145
           RAE+Q  + EC+G A
Sbjct: 105 RAEVQKAISECKGIA 119


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 415 RKNAGTGDVFTI 450
           +KNAG+G  FTI
Sbjct: 584 KKNAGSGSRFTI 595


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,753
Number of Sequences: 438
Number of extensions: 1676
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)