Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_C15
         (177 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370048-1|ABD18609.1|  144|Anopheles gambiae putative secreted ...    22   2.3  
Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease prot...    21   5.3  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    20   9.2  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    20   9.2  

>DQ370048-1|ABD18609.1|  144|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 142 FXIXXKXXXXSFSVLQRFTSRKTPFRFAACS 50
           F +       S SV+QRF + K  F  A C+
Sbjct: 80  FKVWQTKSIVSDSVVQRFVAIKVQFHGARCT 110


>Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 73  PFRFAACSLLFNRFYVY*RHCL 8
           PF F   SL+  +F +   HC+
Sbjct: 55  PFHFCGGSLIAEKFVLTAGHCV 76


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 38  VKEKRTRSKSKGRLTRSKP 94
           VK+   RS +KG L  SKP
Sbjct: 473 VKDTYYRSFTKGELFGSKP 491


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 38  VKEKRTRSKSKGRLTRSKP 94
           VK+   RS +KG L  SKP
Sbjct: 473 VKDTYYRSFTKGELFGSKP 491


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,231
Number of Sequences: 2352
Number of extensions: 804
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 37
effective length of database: 476,955
effective search space used: 10016055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)