Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_C14
(518 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0553 - 9420960-9421164,9421634-9421812,9421902-9421970,942... 78 5e-15
06_01_1037 - 8140602-8140782,8141489-8141545,8141649-8141845,814... 66 2e-11
12_01_0001 + 1777-1935,2002-2109,2492-2560,2652-2836,3040-3055 56 2e-08
11_01_0002 + 3386-3541,3619-3717,4114-4182,4275-4459,4662-4677 54 9e-08
07_01_0911 - 7664498-7664704,7664790-7664858,7666441-7666569 51 6e-07
07_03_1378 + 26158233-26158562,26159075-26159176,26159551-261598... 45 4e-05
09_06_0188 - 21441377-21442201 42 3e-04
09_06_0308 - 22199389-22199451,22199604-22199924,22200178-222004... 37 0.008
08_02_0737 - 20572068-20572290,20572785-20572841,20573482-205736... 37 0.008
08_02_1559 - 27873345-27873407,27873549-27873830,27874162-278742... 36 0.020
10_08_0747 - 20272157-20272456,20272538-20272664,20272770-202728... 36 0.026
09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116... 35 0.045
04_04_1121 - 31041629-31041793,31041891-31042022,31042255-310424... 33 0.10
07_01_0413 - 3155080-3155274,3155628-3155933,3156062-3156163,315... 33 0.18
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549... 32 0.24
03_03_0130 - 14699658-14699723,14699828-14700109,14700444-147005... 32 0.24
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 31 0.73
08_02_0162 + 13464698-13464974,13465719-13465837,13465920-134665... 30 1.3
03_06_0337 + 33224333-33224479,33224603-33224663,33224740-332247... 30 1.3
11_06_0497 + 24337772-24337993,24338042-24338083,24338176-24339357 29 2.2
03_01_0160 + 1302366-1302731,1303318-1303364,1303455-1303800 29 2.2
11_06_0728 + 26717018-26717306,26717494-26717598,26717789-267178... 29 3.0
11_06_0594 + 25349612-25352530 29 3.0
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 29 3.0
07_03_1586 - 27929947-27930056,27930143-27930286,27930377-279307... 29 3.0
03_02_0555 + 9431451-9431688,9432685-9432803,9432886-9433079,943... 29 3.0
02_05_1014 + 33510108-33510471,33510857-33511362 29 3.0
01_05_0696 - 24366857-24368200 29 3.0
04_04_0979 - 29862280-29862444,29862718-29862999,29863831-298639... 28 3.9
03_06_0507 + 34404843-34404968,34405091-34405151,34405260-344052... 28 5.2
02_05_1020 - 33561454-33561568,33561839-33562070,33563286-335633... 28 5.2
07_03_1061 + 23651404-23651625,23651764-23652954 27 6.8
08_01_0185 + 1558580-1558755,1558848-1559737,1559828-1559919,156... 27 9.0
02_04_0518 + 23601355-23602498,23603481-23603779 27 9.0
>03_02_0553 -
9420960-9421164,9421634-9421812,9421902-9421970,
9422452-9422607,9422756-9422968
Length = 273
Score = 77.8 bits (183), Expect = 5e-15
Identities = 54/146 (36%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Frame = +3
Query: 117 MVDQIEMALDDIIKASKKGSGGVGRKFDTXXXXXXXXXXXXXXXXXXXXXXXXXXXTKTT 296
M + ++M LDDIIK +KK + GR K +
Sbjct: 1 MAETLDMTLDDIIKNNKKANPSSGRGRRGSAAGGGGGGGGGVGGGGGGGVGPTRRPFKRS 60
Query: 297 NYTRGDVN------STWKHDMFNDF------GERKVPRSGAITTGPSKLLVSNLDFGVSD 440
G S W+HDM++D G R AI TG +KL +SNLDFGVS
Sbjct: 61 GNRAGPYQPPKAPESAWQHDMYSDVAAGGGGGSGGGGRVSAIETG-TKLYISNLDFGVST 119
Query: 441 SDIQELFSEFGILKSAAVHYDRSGRS 518
DI+ELFSE G LK +HYDRSGRS
Sbjct: 120 EDIKELFSELGDLKKYVIHYDRSGRS 145
>06_01_1037 -
8140602-8140782,8141489-8141545,8141649-8141845,
8143174-8143242,8143347-8143490,8144055-8144225
Length = 272
Score = 65.7 bits (153), Expect = 2e-11
Identities = 44/133 (33%), Positives = 61/133 (45%)
Frame = +3
Query: 117 MVDQIEMALDDIIKASKKGSGGVGRKFDTXXXXXXXXXXXXXXXXXXXXXXXXXXXTKTT 296
M ++M+LDD+IK + + S G GR +
Sbjct: 1 MATSLDMSLDDMIK-NNRNSRGRGRGRSQGGGRGRGDGQRFSYGSGRGRGAGTFRGRGSF 59
Query: 297 NYTRGDVNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGI 476
N T+ V W+ D+F D V ++T +KL +SNL +GV+ DIQELFSE G
Sbjct: 60 NKTKDIV---WRQDLFED---SMVAAGLSVTESSTKLYISNLHYGVTKEDIQELFSEMGH 113
Query: 477 LKSAAVHYDRSGR 515
LK AVHYD + R
Sbjct: 114 LKHCAVHYDNNRR 126
>12_01_0001 + 1777-1935,2002-2109,2492-2560,2652-2836,3040-3055
Length = 178
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/45 (57%), Positives = 36/45 (80%)
Frame = +3
Query: 384 ITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
+ TG +KL +SNLD+ VS+ DI+ELFSE G +K +++YDRSGRS
Sbjct: 68 VETG-TKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGRS 111
>11_01_0002 + 3386-3541,3619-3717,4114-4182,4275-4459,4662-4677
Length = 174
Score = 53.6 bits (123), Expect = 9e-08
Identities = 25/45 (55%), Positives = 36/45 (80%)
Frame = +3
Query: 384 ITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
+ TG +KL +SNLD+ VS+ DI+ELFSE G +K +++YD+SGRS
Sbjct: 64 VETG-TKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRS 107
>07_01_0911 - 7664498-7664704,7664790-7664858,7666441-7666569
Length = 134
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 381 AITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
++ TG +KL +SNLD GV+ D+QELFSE G LK +V+YD+ G+S
Sbjct: 21 SLETG-TKLHISNLDPGVTVDDVQELFSEIGELKRYSVNYDKDGKS 65
>07_03_1378 +
26158233-26158562,26159075-26159176,26159551-26159850,
26160006-26160068
Length = 264
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 345 NDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRS 518
+DF R G+ +KL V NL +GV +S ++ LFSE G + A V YDR SGRS
Sbjct: 162 DDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRS 220
>09_06_0188 - 21441377-21442201
Length = 274
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +3
Query: 375 SGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGR 515
SG + S + VSNLDF +++SD+ LFS FG + V DR R
Sbjct: 62 SGGLAPSKSTVYVSNLDFALTNSDLHTLFSRFGRVARVTVLKDRDSR 108
>09_06_0308 -
22199389-22199451,22199604-22199924,22200178-22200423,
22202152-22203337,22203487-22203551,22204205-22204486,
22205005-22205106,22205587-22206105
Length = 927
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +3
Query: 393 GPS-KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRS 518
GPS ++ V NL + V DS + +LFSE G + A V YDR +GRS
Sbjct: 234 GPSFRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRS 277
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +3
Query: 399 SKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDR 506
+K+ V NL + + + +LF + GI++ + V Y+R
Sbjct: 143 AKVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNR 178
>08_02_0737 -
20572068-20572290,20572785-20572841,20573482-20573672,
20574566-20574700,20575722-20575871
Length = 251
Score = 37.1 bits (82), Expect = 0.008
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +3
Query: 324 TWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQ 452
TW+ D+F+D + SG I TG +KL +SNLD+GVS+ DI+
Sbjct: 59 TWRPDLFSD----SMAASG-IETG-TKLYISNLDYGVSNEDIK 95
>08_02_1559 -
27873345-27873407,27873549-27873830,27874162-27874263,
27874402-27874872
Length = 305
Score = 35.9 bits (79), Expect = 0.020
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +3
Query: 411 VSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRS 518
V NL + V DS + +LFSE G + +A+V YDR SGRS
Sbjct: 225 VGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRS 261
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 399 SKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRS 518
+K+ V NL + V + +LF + G+++ A V Y+R +G+S
Sbjct: 127 AKVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQS 167
>10_08_0747 -
20272157-20272456,20272538-20272664,20272770-20272843,
20272928-20272971,20273697-20276223
Length = 1023
Score = 35.5 bits (78), Expect = 0.026
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 399 SKLLVSNLDFGVSDSDIQELFSEFG 473
S+L V NLDF VS+SDI ++FS FG
Sbjct: 869 SRLYVGNLDFRVSESDIIKMFSPFG 893
>09_01_0079 -
1159963-1160211,1160303-1160509,1160631-1160801,
1161732-1161869,1162184-1162273,1162354-1162431,
1162510-1163166,1163245-1163363,1164305-1164584
Length = 662
Score = 34.7 bits (76), Expect = 0.045
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 399 SKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
+ L + NLD V D ++ELF+E+G + S V D +G S
Sbjct: 322 TNLYLKNLDDSVDDDKLRELFAEYGTITSCKVMRDSNGVS 361
Score = 33.5 bits (73), Expect = 0.10
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 399 SKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
+ + V NL ++ D++E+F +FG + SA V + GRS
Sbjct: 219 NNVYVKNLSENTTEDDLKEIFGKFGTITSAVVMREGDGRS 258
>04_04_1121 -
31041629-31041793,31041891-31042022,31042255-31042425,
31042521-31042622,31042703-31042807,31043115-31043286,
31043916-31043980,31044179-31044502,31044729-31044846,
31044928-31045011,31045472-31045603,31045714-31046570,
31046735-31046849,31047371-31047481,31047763-31047824
Length = 904
Score = 33.5 bits (73), Expect = 0.10
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +3
Query: 399 SKLLVSNLDFGVSDSDIQELFSEFGILKS 485
+KLLV N+ F ++ D+++LFS FG +KS
Sbjct: 781 TKLLVRNVAFEATEKDLRQLFSPFGQIKS 809
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 399 SKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
S+L V NL G + ++E+FS G + A V + G+S
Sbjct: 23 SRLCVKNLPKGADEGRLREVFSRKGEVTDAKVIRTKDGKS 62
>07_01_0413 -
3155080-3155274,3155628-3155933,3156062-3156163,
3156262-3156705
Length = 348
Score = 32.7 bits (71), Expect = 0.18
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 369 PRSG-AITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDR 506
PRS A+ P +L V NL + ++ +I + FSE G + + + YD+
Sbjct: 107 PRSRPALGQEPGRLFVGNLPYTMTSGEISQTFSEAGRVDNVQIIYDK 153
>06_03_0614 -
22753092-22753349,22754059-22754277,22754712-22754960,
22755186-22755275,22755379-22755456,22755562-22756337,
22757042-22757384
Length = 670
Score = 32.3 bits (70), Expect = 0.24
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +3
Query: 390 TGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
+G + + + NL+ + + + E+FS FG + S+ V D +G+S
Sbjct: 146 SGLANVFIKNLEPNIDNKSLYEMFSSFGTILSSKVATDFNGKS 188
Score = 31.1 bits (67), Expect = 0.55
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 405 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
L + NLD ++D +++LF FG + S V D GRS
Sbjct: 345 LYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRS 382
Score = 30.3 bits (65), Expect = 0.97
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 399 SKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
+ + V NL SD+D+ FS FG + SA V D +G S
Sbjct: 240 TNVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLS 279
>03_03_0130 -
14699658-14699723,14699828-14700109,14700444-14700545,
14701038-14701385
Length = 265
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 399 SKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRS 518
+++ V NL +GV ++ + LFS G + A V YDR SGRS
Sbjct: 180 NRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRS 220
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 30.7 bits (66), Expect = 0.73
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 405 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
L + NLD + D + ELFS +G + S + D +G S
Sbjct: 323 LYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVS 360
>08_02_0162 +
13464698-13464974,13465719-13465837,13465920-13466579,
13466686-13466763,13466849-13466938,13467241-13467378,
13467730-13467738
Length = 456
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 399 SKLLVSNLDFGVSDSD-IQELFSEFGILKSAAVHYDRSGRS 518
+ L + NLD + D + ++E+F++FG + S V D +G S
Sbjct: 321 TNLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRDLNGVS 361
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +3
Query: 399 SKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
+ + V NL ++ +++E+F +FG + S V + G+S
Sbjct: 218 NNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKS 257
>03_06_0337 +
33224333-33224479,33224603-33224663,33224740-33224776,
33225237-33225367,33225447-33225590,33225686-33225776,
33225973-33226106,33226234-33226373,33227328-33227426,
33227520-33227602,33227690-33227744,33227826-33227937,
33228274-33228766,33228881-33229094,33229203-33229273,
33229733-33229901,33229991-33230120,33230556-33230968,
33231059-33231262
Length = 975
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 378 GAITTGPSKLLVSNLDFGVSDSDIQELFSEFG 473
GA PS + VSNL + SD++ +FSE G
Sbjct: 27 GAGGHSPSTVFVSNLPYTFKSSDLEAVFSEVG 58
>11_06_0497 + 24337772-24337993,24338042-24338083,24338176-24339357
Length = 481
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 393 GPS---KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRS 509
GPS K+ V L V+++D ++ F +FG + V YD +
Sbjct: 115 GPSRTKKIFVGGLASTVTEADFRKYFEQFGTITDVVVMYDHN 156
>03_01_0160 + 1302366-1302731,1303318-1303364,1303455-1303800
Length = 252
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 375 SGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKS 485
+G TG K++ S L + ++++I+ELF FG L+S
Sbjct: 67 AGIYETG--KVVASGLPYTTTEAEIRELFERFGPLRS 101
>11_06_0728 +
26717018-26717306,26717494-26717598,26717789-26717870,
26717979-26718055,26719087-26719151,26719261-26719302,
26719385-26719444,26719583-26720203,26720315-26720450,
26720667-26720734,26720811-26720948
Length = 560
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 369 PRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDR 506
P S GP ++ V L + +++ ++EL FG L+ + DR
Sbjct: 336 PGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDR 381
>11_06_0594 + 25349612-25352530
Length = 972
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 270 FCLAILHLSGYYEIHHHVLVFCLYQIFCQHHRCLFY 163
FC + LHLS + +L FC + C + CL Y
Sbjct: 429 FC-SPLHLSSWLSNAEKMLTFCYNALPCDYRSCLLY 463
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 369 PRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDR 506
P S GP ++ V L + +++ ++EL FG L+ + DR
Sbjct: 341 PGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDR 386
>07_03_1586 -
27929947-27930056,27930143-27930286,27930377-27930704,
27931189-27931404,27932099-27932284,27932439-27932521,
27932621-27932752,27932943-27932999,27933352-27933412,
27933807-27933889,27933975-27934134
Length = 519
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +3
Query: 300 YTRGDVNSTWKHDMFNDFGERKVPRSGAITTGPSK--LLVSNLDFGVSDSDIQELFSEFG 473
++ G VN H N + G+ GP + L V ++ D D+ LF EFG
Sbjct: 407 FSDGKVNIPNSHS--NHASSAANTKIGSKIEGPPRANLFVYDIPQEYGDEDLANLFQEFG 464
Query: 474 ILKSAAVHYDRS 509
+ S V DR+
Sbjct: 465 RILSTKVFIDRA 476
>03_02_0555 +
9431451-9431688,9432685-9432803,9432886-9433079,
9433174-9433430,9433544-9433650,9433715-9433888,
9434359-9434490,9434776-9434955,9435062-9435265
Length = 534
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 390 TGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
+G + V NL+ V + +QELF +FG + S V + G S
Sbjct: 111 SGVGNVFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGTS 153
>02_05_1014 + 33510108-33510471,33510857-33511362
Length = 289
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 411 VSNLDFGVSDSDIQELFSEFGILKSAAVHYD-RSGRS 518
V+NL + D++ELF FG L A V D R+G S
Sbjct: 212 VTNLSEDTREEDLRELFGSFGPLTRAYVALDHRTGES 248
>01_05_0696 - 24366857-24368200
Length = 447
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 402 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRS-GRS 518
KL V L + + ++ +FS FG L+ A V D+S GRS
Sbjct: 77 KLFVRGLGWETNSDSLRAIFSAFGDLEEAVVITDKSTGRS 116
>04_04_0979 -
29862280-29862444,29862718-29862999,29863831-29863929,
29864037-29864366
Length = 291
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 402 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
KL VSNL + +++E FS+F L + V SG+S
Sbjct: 175 KLYVSNLPWKARAPNMKEFFSKFNPLSAKVVFDSPSGKS 213
>03_06_0507 +
34404843-34404968,34405091-34405151,34405260-34405296,
34405365-34405386,34405861-34405957,34406037-34406180,
34407034-34407173,34408205-34408255,34408347-34408429,
34408515-34408590,34408646-34408760,34409080-34409575,
34409682-34409895,34410000-34410070,34410527-34410695,
34410787-34410916,34411330-34411742,34411839-34412039
Length = 881
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 396 PSKLLVSNLDFGVSDSDIQELFSEFG 473
PS + VSNL + +D++ +FSE G
Sbjct: 26 PSTVFVSNLPYTFKSADLEAVFSEVG 51
>02_05_1020 -
33561454-33561568,33561839-33562070,33563286-33563374,
33563856-33563944
Length = 174
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 399 SKLLVSNLDFGVSDSDIQELFSEFGILKSAAV 494
++L V NLD V+ ++++ F FG+L+S V
Sbjct: 2 ARLYVGNLDPRVTSGELEDEFRVFGVLRSVWV 33
>07_03_1061 + 23651404-23651625,23651764-23652954
Length = 470
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +3
Query: 402 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRS 509
K+ V L V++ + + F +FG++ V YD +
Sbjct: 107 KIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHN 142
>08_01_0185 +
1558580-1558755,1558848-1559737,1559828-1559919,
1560018-1560086,1560218-1560316
Length = 441
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 486 HS*EFQIQRTIPECPSQTHQSPSWK 412
H+ +IQ TIP P + + P WK
Sbjct: 237 HNVVLEIQATIPSTPEKPSKKPMWK 261
>02_04_0518 + 23601355-23602498,23603481-23603779
Length = 480
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 387 TTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRS 509
T+ KL V N+ + +++ LFS FG +++ + DR+
Sbjct: 187 TSPDRKLFVDNVPARAAHDELRRLFSRFGEIEAGPLGADRA 227
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,640,440
Number of Sequences: 37544
Number of extensions: 237134
Number of successful extensions: 552
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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