Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_C14
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 37 0.010
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 37 0.010
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 35 0.030
AF038605-5|AAB92019.1| 211|Caenorhabditis elegans Hypothetical ... 35 0.030
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 34 0.053
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 34 0.070
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 34 0.070
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.093
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 33 0.16
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 33 0.16
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 33 0.16
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 33 0.16
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 32 0.21
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.28
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 32 0.28
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 31 0.65
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 31 0.65
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 31 0.65
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 31 0.65
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 31 0.65
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 0.65
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 30 1.1
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 30 1.1
AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral signa... 29 1.5
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 29 2.6
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 29 2.6
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 29 2.6
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 29 2.6
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 29 2.6
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 29 2.6
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 29 2.6
Z82266-4|CAB05180.1| 227|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81593-3|CAB04741.1| 332|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical pr... 28 4.6
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical p... 27 8.0
Z68507-6|CAA92829.1| 240|Caenorhabditis elegans Hypothetical pr... 27 8.0
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 27 8.0
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 27 8.0
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 36.7 bits (81), Expect = 0.010
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 369 PRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSG 512
P + + GP +L VSN+ F D D++ +F +FG++ + ++ G
Sbjct: 143 PSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG 190
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 36.7 bits (81), Expect = 0.010
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 369 PRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSG 512
P + + GP +L VSN+ F D D++ +F +FG++ + ++ G
Sbjct: 143 PSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG 190
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 35.1 bits (77), Expect = 0.030
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +3
Query: 312 DVNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAA 491
DVN+ + M + ER+ G + P L V NLD V++ I LF++ G +
Sbjct: 17 DVNTGYNARMHSKLAEREGFHLGNGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTK 76
Query: 492 VHYDRSG 512
V +D G
Sbjct: 77 VIFDELG 83
>AF038605-5|AAB92019.1| 211|Caenorhabditis elegans Hypothetical
protein C02B10.4 protein.
Length = 211
Score = 35.1 bits (77), Expect = 0.030
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 384 ITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
I TGPS L++ NL V+ D++ELF ++ + +HY +G S
Sbjct: 88 IHTGPSTLIIKNLATTVTQEDLEELFEQYE-PELVQLHYGPTGES 131
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 34.3 bits (75), Expect = 0.053
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +3
Query: 312 DVNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAA 491
DVN+ + M + ER+ G + P L V NLD V++ I LF++ G +
Sbjct: 17 DVNTGYNARMHSKLAEREGFHLGNGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTK 76
Query: 492 VHYDRS 509
V +D S
Sbjct: 77 VIFDGS 82
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 33.9 bits (74), Expect = 0.070
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 405 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
L V N++ ++D +++ FS FG + SA V D +GRS
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRS 382
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 33.9 bits (74), Expect = 0.070
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 405 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
L V N++ ++D +++ FS FG + SA V D +GRS
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRS 382
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 33.5 bits (73), Expect = 0.093
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 312 DVNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAA 491
DVN+ + M + ER+ G + P L V NLD V++ I LF++ G +
Sbjct: 17 DVNTGYNARMHSKLAEREGFHLGNGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTK 76
Query: 492 VHYD 503
V +D
Sbjct: 77 VIFD 80
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 405 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
L V NLD V D +++ F +G + SA V D +GRS
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRS 356
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 405 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
L V NLD V D +++ F +G + SA V D +GRS
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRS 296
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 405 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
L V NLD V D +++ F +G + SA V D +GRS
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRS 293
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 405 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
L V NLD V D +++ F +G + SA V D +GRS
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRS 356
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 32.3 bits (70), Expect = 0.21
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 357 ERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKS 485
E++V + T SK+ V N+ F +D +++ LFS+FG + S
Sbjct: 669 EKRVGFKFSTTLEKSKVFVRNVHFQATDDELKALFSKFGTVTS 711
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 31.9 bits (69), Expect = 0.28
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +3
Query: 396 PSKLL-VSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRS 518
PSK L V NL ++ D++++F EFG + + YDR SG S
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNS 116
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 369 PRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRS 509
P G+ T +K+ V L + SD + E F +FG ++ A V DR+
Sbjct: 25 PVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRN 71
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.7 bits (66), Expect = 0.65
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 315 VNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEF-GILKSA 488
V W D+ + + R T S++ S++DF ++ SD Q FSE+ G KS+
Sbjct: 438 VRKAWLRDIAEEQEKYAAERDAISMTATSEMTASSVDFDMNASDQQSEFSEWSGSRKSS 496
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 30.7 bits (66), Expect = 0.65
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 315 VNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEF-GILKSA 488
V W D+ + + R T S++ S++DF ++ SD Q FSE+ G KS+
Sbjct: 438 VRKAWLRDIAEEQEKYAAERDAISMTATSEMTASSVDFDMNASDQQSEFSEWSGSRKSS 496
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.7 bits (66), Expect = 0.65
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 315 VNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEF-GILKSA 488
V W D+ + + R T S++ S++DF ++ SD Q FSE+ G KS+
Sbjct: 438 VRKAWLRDIAEEQEKYAAERDAISMTATSEMTASSVDFDMNASDQQSEFSEWSGSRKSS 496
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.7 bits (66), Expect = 0.65
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 315 VNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEF-GILKSA 488
V W D+ + + R T S++ S++DF ++ SD Q FSE+ G KS+
Sbjct: 438 VRKAWLRDIAEEQEKYAAERDAISMTATSEMTASSVDFDMNASDQQSEFSEWSGSRKSS 496
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 30.7 bits (66), Expect = 0.65
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 315 VNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEF-GILKSA 488
V W D+ + + R T S++ S++DF ++ SD Q FSE+ G KS+
Sbjct: 438 VRKAWLRDIAEEQEKYAAERDAISMTATSEMTASSVDFDMNASDQQSEFSEWSGSRKSS 496
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.7 bits (66), Expect = 0.65
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 315 VNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEF-GILKSA 488
V W D+ + + R T S++ S++DF ++ SD Q FSE+ G KS+
Sbjct: 438 VRKAWLRDIAEEQEKYAAERDAISMTATSEMTASSVDFDMNASDQQSEFSEWSGSRKSS 496
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 375 SGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSG 512
S + T GP +L VSN+ F + D+ +F + G + + ++ G
Sbjct: 92 SSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG 137
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 375 SGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSG 512
S + T GP +L VSN+ F + D+ +F + G + + ++ G
Sbjct: 92 SSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG 137
>AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral
signaling target protein 2 protein.
Length = 661
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +1
Query: 220 VVVDFVIAAQVEYCEAEIVAA*PRLRITQGVMLTAHG 330
+V D + ++YC+ ++ A PRL I G+++ ++G
Sbjct: 207 LVKDLITQDLIDYCDPSVMIAIPRLGIVWGLLVYSNG 243
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +3
Query: 402 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
KL + L ++ +++E+F++FG ++ +V D+ G+S
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +3
Query: 402 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
KL + L ++ +++E+F++FG ++ +V D+ G+S
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +3
Query: 402 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
KL + L ++ +++E+F++FG ++ +V D+ G+S
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +3
Query: 402 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
KL + L ++ +++E+F++FG ++ +V D+ G+S
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +3
Query: 402 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
KL + L ++ +++E+F++FG ++ +V D+ G+S
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +3
Query: 402 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
KL + L ++ +++E+F++FG ++ +V D+ G+S
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +3
Query: 402 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
KL + L ++ +++E+F++FG ++ +V D+ G+S
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
>Z82266-4|CAB05180.1| 227|Caenorhabditis elegans Hypothetical
protein F23B2.6 protein.
Length = 227
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 402 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSG 512
++ +SNL V SD+QELF F + K +V+++ +G
Sbjct: 81 RINISNLAETVISSDLQELFGAFNLHK-VSVNFNENG 116
>Z81593-3|CAB04741.1| 332|Caenorhabditis elegans Hypothetical
protein T20B3.3 protein.
Length = 332
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 303 CNS*SWLRRHDFCLAILHLSGYYEIHHHVL-VFCLY 199
CN +L DF +LH+ + I HV VFC++
Sbjct: 6 CNQTGYLHTADFQRLVLHVISFISIPIHVFGVFCVF 41
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +3
Query: 288 KTTNYTRGDVNSTWKHDMFNDFGERKVPRSGAITTGPSKLL---VSNLDFGVSDSDIQEL 458
+T + D N K D R + +S A + L V N+ +++ ++ +
Sbjct: 103 ETEGEEKKDENKEGKRDRTKQRENRTLQKSNARASAAENALTVFVGNMPLTMNEKSVRRI 162
Query: 459 FSEFGILKS 485
FS+FG + S
Sbjct: 163 FSDFGTISS 171
>Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical
protein C01F6.5 protein.
Length = 223
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 354 GERKVPRS-GAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGR 515
G R V RS A ++ +SNL V D+++LF+EF I ++ +V+++ G+
Sbjct: 56 GIRTVDRSIPANENREVRINLSNLAHTVHSGDLRQLFAEFKI-RNVSVNFNEHGK 109
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 402 KLLVSNLDFGVSDSDIQELFSEFGILKS 485
K++VSN+ V+ S +Q FS++G + S
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITS 140
>Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK856.13 protein.
Length = 1037
Score = 27.1 bits (57), Expect = 8.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 276 HDFCLAILHLSGYYEIHHHVLVFCLY 199
HD+CL ++ E H L+ C Y
Sbjct: 756 HDYCLKLIECLNKMEKHQDALIVCCY 781
>Z68507-6|CAA92829.1| 240|Caenorhabditis elegans Hypothetical
protein M18.7a protein.
Length = 240
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 411 VSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRS 518
+SNL V SD++ELF ++ L S +V+++ G S
Sbjct: 78 ISNLAPTVISSDLEELFGDYR-LSSVSVNFNEHGDS 112
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 393 GPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYD 503
GP+ +LV NL + + I+++F FG ++ + D
Sbjct: 125 GPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVD 161
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 393 GPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYD 503
GP+ +LV NL + + I+++F FG ++ + D
Sbjct: 270 GPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVD 306
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,199,865
Number of Sequences: 27780
Number of extensions: 219307
Number of successful extensions: 546
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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