Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_C12
         (555 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   3.9  
AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione S-tran...    23   5.1  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    23   5.1  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.7  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   6.7  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 411 SAGGSGSTVPTTTN 452
           SAGG+GST+   TN
Sbjct: 955 SAGGAGSTISNNTN 968


>AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione
           S-transferase E3 protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +1

Query: 172 YPARISILPVVSPHDPCLQLAMPLYQKI-VDLTNNA 276
           +PA  S  P+V  +   L+  MP YQ+I  D  N+A
Sbjct: 177 FPADASKYPLVLAYLKRLEQTMPHYQEINTDRANDA 212


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = +1

Query: 31  LHGIAQLILNEWGYQTPVQIIVVTDGSSGVGTIGRNRIIQ 150
           + G+  ++   WG            G+ GV  +G  R+IQ
Sbjct: 350 IEGLGTMLAGLWGSGNGTNTFGENVGAIGVTKVGSRRVIQ 389


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 152 HYHYRLHIQQE*VYC 196
           H+H ++H QQ  +YC
Sbjct: 426 HHHQQVHNQQRILYC 440


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 130 LWFQHHCFHLSP 95
           LW ++HC  L+P
Sbjct: 707 LWMENHCLELAP 718


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,434
Number of Sequences: 2352
Number of extensions: 14520
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)