Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_C11
         (548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              27   0.13 
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   0.38 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   0.38 
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   8.2  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   8.2  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   8.2  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   8.2  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   8.2  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   8.2  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   8.2  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.2  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 278 LVVHRVPDGRVCASFHRERFQEPARHRC 361
           L +H +P+ +V   F  +R +E A  RC
Sbjct: 396 LTIHTIPEVKVTPRFQAKRLKEEANIRC 423


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +3

Query: 93  GDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAP 206
           G+  G S  +L     ISP + GLV + +  SGT+ AP
Sbjct: 251 GESAGGSSVSLHL---ISPVTRGLVRRGILQSGTLNAP 285


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +3

Query: 93  GDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAP 206
           G+  G S  +L     ISP + GLV + +  SGT+ AP
Sbjct: 251 GESAGGSSVSLHL---ISPVTRGLVRRGILQSGTLNAP 285


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 192 YRSRTPV*QQDHTKRERC 139
           YR  +    +D T+RERC
Sbjct: 59  YRETSKERSRDRTERERC 76


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 192 YRSRTPV*QQDHTKRERC 139
           YR  +    +D T+RERC
Sbjct: 59  YRETSKERSRDRTERERC 76


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 192 YRSRTPV*QQDHTKRERC 139
           YR  +    +D T+RERC
Sbjct: 59  YRETSKERSRDRTERERC 76


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 192 YRSRTPV*QQDHTKRERC 139
           YR  +    +D T+RERC
Sbjct: 59  YRETSKERSRDRTERERC 76


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 192 YRSRTPV*QQDHTKRERC 139
           YR  +    +D T+RERC
Sbjct: 59  YRETSKERSRDRTERERC 76


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 192 YRSRTPV*QQDHTKRERC 139
           YR  +    +D T+RERC
Sbjct: 59  YRETSKERSRDRTERERC 76


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 192 YRSRTPV*QQDHTKRERC 139
           YR  +    +D T+RERC
Sbjct: 59  YRETSKERSRDRTERERC 76


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 57  IEIINDVHILKPGDKVGASEATLLN 131
           I I+N  HIL+   K G S   L+N
Sbjct: 480 IGIVNQFHILQFITKNGTSNNYLIN 504


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,930
Number of Sequences: 438
Number of extensions: 2328
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)