Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_C10
         (401 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   3.2  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   4.2  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    22   7.3  
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    22   9.6  

>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +2

Query: 242 FNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEH 367
           ++ D +    +V+ R P  V+  +  H+V    V V  P+ H
Sbjct: 128 YHADHHTGFNAVVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 91  VSTAIIPTTRHFLF*VRTDDVNSNFRFI 8
           VST   PT RHF      D+ N NF ++
Sbjct: 132 VSTTETPT-RHFFCCCSGDNCNGNFSYL 158


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein
          protein.
          Length = 1133

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 52 F*VRTDDVNSNFRFI 8
          F +RT D+N+ FRFI
Sbjct: 44 FFLRTFDLNNGFRFI 58


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -2

Query: 271 FMRIIKIFVKWLERQRI 221
           FMR++K  V++ ER++I
Sbjct: 248 FMRVVKDTVEYREREQI 264


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 335,011
Number of Sequences: 2352
Number of extensions: 4694
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)