Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_C10
(401 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97056-3|CAB09792.1| 650|Homo sapiens DEAD (Asp-Glu-Ala-Asp) bo... 66 4e-11
U59321-1|AAC50787.1| 650|Homo sapiens DEAD-box protein p72 prot... 66 4e-11
CR456432-1|CAG30318.1| 652|Homo sapiens DDX17 protein. 66 4e-11
BC000595-1|AAH00595.2| 729|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 66 4e-11
AB209595-1|BAD92832.1| 737|Homo sapiens DEAD box polypeptide 17... 66 4e-11
X52104-1|CAA36324.1| 614|Homo sapiens protein ( Human mRNA for ... 57 2e-08
X15729-1|CAA33751.1| 614|Homo sapiens protein ( Human mRNA for ... 57 2e-08
BT006943-1|AAP35589.1| 614|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 57 2e-08
BC016027-1|AAH16027.1| 614|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 57 2e-08
AF015812-1|AAB84094.1| 614|Homo sapiens RNA helicase p68 protein. 57 2e-08
AB209919-1|BAD93156.1| 457|Homo sapiens Hypothetical protein DK... 57 2e-08
BX571764-1|CAE11890.1| 406|Homo sapiens hypothetical protein pr... 56 3e-08
AJ010931-1|CAA09408.1| 111|Homo sapiens p68 RNA helicase protein. 53 3e-07
BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 43 3e-04
BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein. 43 3e-04
BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein. 43 3e-04
AF083255-1|AAC32396.1| 709|Homo sapiens RNA helicase-related pr... 43 3e-04
AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related pr... 43 3e-04
BX641072-1|CAE46035.1| 496|Homo sapiens hypothetical protein pr... 36 0.067
BC015476-1|AAH15476.1| 622|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 36 0.067
AK222598-1|BAD96318.1| 622|Homo sapiens DEAD-box protein abstra... 36 0.067
AK027768-1|BAB55355.1| 622|Homo sapiens protein ( Homo sapiens ... 36 0.067
AK001255-1|BAA91585.1| 622|Homo sapiens protein ( Homo sapiens ... 36 0.067
AF195417-1|AAF04150.1| 621|Homo sapiens DEAD-box protein abstra... 36 0.067
BC041785-1|AAH41785.1| 599|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 30 2.5
AK093661-1|BAC04214.1| 360|Homo sapiens protein ( Homo sapiens ... 30 2.5
AK001652-1|BAA91812.1| 491|Homo sapiens protein ( Homo sapiens ... 30 2.5
AB208938-1|BAD92175.1| 512|Homo sapiens ATP-dependent RNA helic... 30 2.5
BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 29 5.8
AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein. 29 5.8
AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein. 29 5.8
>Z97056-3|CAB09792.1| 650|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 17 protein.
Length = 650
Score = 66.1 bits (154), Expect = 4e-11
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 197 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEV-PNPIEHFE 373
+ +R+ WD L F K+FY H V +PYEV++ R K E+TV G +V P P+ F
Sbjct: 36 ERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFH 95
Query: 374 EANFPDYV 397
ANFP YV
Sbjct: 96 HANFPQYV 103
>U59321-1|AAC50787.1| 650|Homo sapiens DEAD-box protein p72
protein.
Length = 650
Score = 66.1 bits (154), Expect = 4e-11
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 197 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEV-PNPIEHFE 373
+ +R+ WD L F K+FY H V +PYEV++ R K E+TV G +V P P+ F
Sbjct: 36 ERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFH 95
Query: 374 EANFPDYV 397
ANFP YV
Sbjct: 96 HANFPQYV 103
>CR456432-1|CAG30318.1| 652|Homo sapiens DDX17 protein.
Length = 652
Score = 66.1 bits (154), Expect = 4e-11
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 197 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEV-PNPIEHFE 373
+ +R+ WD L F K+FY H V +PYEV++ R K E+TV G +V P P+ F
Sbjct: 36 ERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFH 95
Query: 374 EANFPDYV 397
ANFP YV
Sbjct: 96 HANFPQYV 103
>BC000595-1|AAH00595.2| 729|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 17 protein.
Length = 729
Score = 66.1 bits (154), Expect = 4e-11
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 197 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEV-PNPIEHFE 373
+ +R+ WD L F K+FY H V +PYEV++ R K E+TV G +V P P+ F
Sbjct: 115 ERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFH 174
Query: 374 EANFPDYV 397
ANFP YV
Sbjct: 175 HANFPQYV 182
>AB209595-1|BAD92832.1| 737|Homo sapiens DEAD box polypeptide 17
isoform p82 variant protein.
Length = 737
Score = 66.1 bits (154), Expect = 4e-11
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 197 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEV-PNPIEHFE 373
+ +R+ WD L F K+FY H V +PYEV++ R K E+TV G +V P P+ F
Sbjct: 117 ERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFH 176
Query: 374 EANFPDYV 397
ANFP YV
Sbjct: 177 HANFPQYV 184
>X52104-1|CAA36324.1| 614|Homo sapiens protein ( Human mRNA for p68
protein. ).
Length = 614
Score = 57.2 bits (132), Expect = 2e-08
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +2
Query: 197 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEE 376
+ + + W+ L F K+FY H + R+ EVE YR E+TV G P P+ +F E
Sbjct: 39 EKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYE 98
Query: 377 ANFP 388
ANFP
Sbjct: 99 ANFP 102
>X15729-1|CAA33751.1| 614|Homo sapiens protein ( Human mRNA for
nuclear p68 protein. ).
Length = 614
Score = 57.2 bits (132), Expect = 2e-08
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +2
Query: 197 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEE 376
+ + + W+ L F K+FY H + R+ EVE YR E+TV G P P+ +F E
Sbjct: 39 EKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYE 98
Query: 377 ANFP 388
ANFP
Sbjct: 99 ANFP 102
>BT006943-1|AAP35589.1| 614|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA helicase,
68kDa) protein.
Length = 614
Score = 57.2 bits (132), Expect = 2e-08
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +2
Query: 197 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEE 376
+ + + W+ L F K+FY H + R+ EVE YR E+TV G P P+ +F E
Sbjct: 39 EKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYE 98
Query: 377 ANFP 388
ANFP
Sbjct: 99 ANFP 102
>BC016027-1|AAH16027.1| 614|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 5 protein.
Length = 614
Score = 57.2 bits (132), Expect = 2e-08
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +2
Query: 197 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEE 376
+ + + W+ L F K+FY H + R+ EVE YR E+TV G P P+ +F E
Sbjct: 39 EKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYE 98
Query: 377 ANFP 388
ANFP
Sbjct: 99 ANFP 102
>AF015812-1|AAB84094.1| 614|Homo sapiens RNA helicase p68 protein.
Length = 614
Score = 57.2 bits (132), Expect = 2e-08
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +2
Query: 197 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEE 376
+ + + W+ L F K+FY H + R+ EVE YR E+TV G P P+ +F E
Sbjct: 39 EKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYE 98
Query: 377 ANFP 388
ANFP
Sbjct: 99 ANFP 102
>AB209919-1|BAD93156.1| 457|Homo sapiens Hypothetical protein
DKFZp686J01190 variant protein.
Length = 457
Score = 57.2 bits (132), Expect = 2e-08
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +2
Query: 197 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEE 376
+ + + W+ L F K+FY H + R+ EVE YR E+TV G P P+ +F E
Sbjct: 90 EKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYE 149
Query: 377 ANFP 388
ANFP
Sbjct: 150 ANFP 153
>BX571764-1|CAE11890.1| 406|Homo sapiens hypothetical protein
protein.
Length = 406
Score = 56.4 bits (130), Expect = 3e-08
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +2
Query: 197 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEE 376
+ + + W+ L F K+FY H + R+ EVE YR E+TV G P P+ +F E
Sbjct: 39 EKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRGKEITVRGHNCPKPVLNFYE 98
Query: 377 ANFP 388
ANFP
Sbjct: 99 ANFP 102
>AJ010931-1|CAA09408.1| 111|Homo sapiens p68 RNA helicase protein.
Length = 111
Score = 53.2 bits (122), Expect = 3e-07
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = +2
Query: 242 FNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFP 388
F K+FY H + R+ EVE YR E+TV G P P+ +F EANFP
Sbjct: 2 FEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFP 50
>BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 42 protein.
Length = 938
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 239 PFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPD 391
PF K+FYN H+ + + +P ++ D R+K + VSG P P F F +
Sbjct: 212 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDE 262
>BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein.
Length = 919
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 239 PFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPD 391
PF K+FYN H+ + + +P ++ D R+K + VSG P P F F +
Sbjct: 193 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDE 243
>BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein.
Length = 819
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 239 PFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPD 391
PF K+FYN H+ + + +P ++ D R+K + VSG P P F F +
Sbjct: 93 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDE 143
>AF083255-1|AAC32396.1| 709|Homo sapiens RNA helicase-related
protein protein.
Length = 709
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 239 PFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPD 391
PF K+FYN H+ + + +P ++ D R+K + VSG P P F F +
Sbjct: 93 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDE 143
>AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related
protein protein.
Length = 938
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 239 PFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPD 391
PF K+FYN H+ + + +P ++ D R+K + VSG P P F F +
Sbjct: 212 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDE 262
>BX641072-1|CAE46035.1| 496|Homo sapiens hypothetical protein
protein.
Length = 496
Score = 35.5 bits (78), Expect = 0.067
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 248 KDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFP 388
K + P + VL S E R K+ + V G +P PI+ F+E FP
Sbjct: 17 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFP 63
>BC015476-1|AAH15476.1| 622|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41 protein.
Length = 622
Score = 35.5 bits (78), Expect = 0.067
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 248 KDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFP 388
K + P + VL S E R K+ + V G +P PI+ F+E FP
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFP 189
>AK222598-1|BAD96318.1| 622|Homo sapiens DEAD-box protein abstrakt
variant protein.
Length = 622
Score = 35.5 bits (78), Expect = 0.067
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 248 KDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFP 388
K + P + VL S E R K+ + V G +P PI+ F+E FP
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFP 189
>AK027768-1|BAB55355.1| 622|Homo sapiens protein ( Homo sapiens
cDNA FLJ14862 fis, clone PLACE1001739, weakly similar to
PUTATIVE ATP-DEPENDENT RNA HELICASE PL10. ).
Length = 622
Score = 35.5 bits (78), Expect = 0.067
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 248 KDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFP 388
K + P + VL S E R K+ + V G +P PI+ F+E FP
Sbjct: 143 KTSWTPPRYVLSMSEERHERVREKYHILVEGDGIPPPIKSFKEMKFP 189
>AK001255-1|BAA91585.1| 622|Homo sapiens protein ( Homo sapiens
cDNA FLJ10393 fis, clone NT2RM4000191, weakly similar to
PUTATIVE ATP-DEPENDENT RNA HELICASE PL10. ).
Length = 622
Score = 35.5 bits (78), Expect = 0.067
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 248 KDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFP 388
K + P + VL S E R K+ + V G +P PI+ F+E FP
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFP 189
>AF195417-1|AAF04150.1| 621|Homo sapiens DEAD-box protein abstrakt
protein.
Length = 621
Score = 35.5 bits (78), Expect = 0.067
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 248 KDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFP 388
K + P + VL S E R K+ + V G +P PI+ F+E FP
Sbjct: 142 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFP 188
>BC041785-1|AAH41785.1| 599|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 52 protein.
Length = 599
Score = 30.3 bits (65), Expect = 2.5
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 311 RNKHEVTVSGVEVPNPIEHFEE 376
RNKH++ V G ++P+PI F++
Sbjct: 144 RNKHKIHVQGTDLPDPIATFQQ 165
>AK093661-1|BAC04214.1| 360|Homo sapiens protein ( Homo sapiens
cDNA FLJ36342 fis, clone THYMU2006666, highly similar to
Homo sapiens putative ATP-dependent RNA helicase ROK1
mRNA. ).
Length = 360
Score = 30.3 bits (65), Expect = 2.5
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 311 RNKHEVTVSGVEVPNPIEHFEE 376
RNKH++ V G ++P+PI F++
Sbjct: 36 RNKHKIHVQGTDLPDPIATFQQ 57
>AK001652-1|BAA91812.1| 491|Homo sapiens protein ( Homo sapiens
cDNA FLJ10790 fis, clone NT2RP4000518, weakly similar to
ATP-DEPENDENT RNA HELICASE ROK1. ).
Length = 491
Score = 30.3 bits (65), Expect = 2.5
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 311 RNKHEVTVSGVEVPNPIEHFEE 376
RNKH++ V G ++P+PI F++
Sbjct: 36 RNKHKIHVQGTDLPDPIATFQQ 57
>AB208938-1|BAD92175.1| 512|Homo sapiens ATP-dependent RNA helicase
ROK1 isoform a variant protein.
Length = 512
Score = 30.3 bits (65), Expect = 2.5
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 311 RNKHEVTVSGVEVPNPIEHFEE 376
RNKH++ V G ++P+PI F++
Sbjct: 143 RNKHKIHVQGTDLPDPIATFQQ 164
>BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46 protein.
Length = 1031
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 227 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHE-VTVSGVEVPNPIE 364
+ +PF K+FY + S EV +R + E +TV G P PI+
Sbjct: 326 IEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIK 372
>AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein.
Length = 1031
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 227 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHE-VTVSGVEVPNPIE 364
+ +PF K+FY + S EV +R + E +TV G P PI+
Sbjct: 326 IEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIK 372
>AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein.
Length = 1058
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 227 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHE-VTVSGVEVPNPIE 364
+ +PF K+FY + S EV +R + E +TV G P PI+
Sbjct: 352 IEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIK 398
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,071,394
Number of Sequences: 237096
Number of extensions: 721417
Number of successful extensions: 1322
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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