Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_C10
         (401 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       28   0.046
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   2.3  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   5.3  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 27.9 bits (59), Expect = 0.046
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 323 EVTVSGVEVPNPIEHFEEANFPDYV 397
           +V VSG  VP PIE FE A   + V
Sbjct: 183 QVNVSGDNVPQPIESFEAAGLRNIV 207


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +3

Query: 228 CRSNHLTKIFIILINQSWIGHHMK 299
           C  NHL ++  +    +W+ H +K
Sbjct: 99  CIENHLKQLGYVQKLDTWVPHELK 122


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 372 SKCSIGLGTSTPLTVTS 322
           S+CS+G  +ST  T +S
Sbjct: 174 SECSLGTASSTSSTASS 190


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,994
Number of Sequences: 438
Number of extensions: 1363
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)