Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_C09
(561 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_01_0076 + 1105331-1105453,1106559-1106705,1107046-1107195,110... 33 0.21
10_08_0961 + 21869612-21869773,21869869-21869956,21870047-218702... 32 0.36
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 31 0.48
07_01_1058 - 9292890-9293655,9293831-9294600 30 1.5
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 29 1.9
05_01_0035 - 232656-232781,233212-233322,233419-233563,233749-23... 29 1.9
12_01_0960 + 9554658-9554761,9554948-9555014,9555558-9555590,955... 29 2.5
07_03_1062 + 23668334-23669644,23670676-23670764,23671494-23671584 29 2.5
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 29 2.5
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 29 3.4
08_02_0203 - 14231134-14231907 29 3.4
04_04_1121 - 31041629-31041793,31041891-31042022,31042255-310424... 29 3.4
03_04_0144 + 17677975-17678520,17679600-17679632 28 4.4
02_01_0311 - 2075881-2076165,2076450-2076519,2076628-2076691,207... 28 5.9
05_03_0388 + 13401985-13402117,13404122-13404173,13405867-134059... 27 7.7
04_04_0350 + 24591002-24591123,24592020-24592091,24592343-245924... 27 7.7
>09_01_0076 + 1105331-1105453,1106559-1106705,1107046-1107195,
1107272-1107531,1107897-1108084,1108187-1108311,
1108485-1108521,1108802-1108893,1109023-1109133,
1109242-1109352,1109576-1109669,1109833-1109945,
1110316-1110411,1110510-1110617,1110665-1110814,
1110910-1110990,1111205-1111276,1111553-1111646,
1111759-1111787,1111870-1111967,1112065-1112160,
1112399-1112620,1113002-1113158,1113472-1113627,
1113703-1113930
Length = 1045
Score = 32.7 bits (71), Expect = 0.21
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +1
Query: 7 GNGNGKMNHSLEDS--PLTDTSLTAQKMEKW 93
GNGNG + HS +DS PL+ ++ AQK K+
Sbjct: 919 GNGNGSVKHSADDSNTPLSPVAVPAQKQLKY 949
>10_08_0961 +
21869612-21869773,21869869-21869956,21870047-21870277,
21870371-21870538,21870808-21871001,21871151-21871234,
21871315-21871434,21871621-21871714,21871813-21871973,
21873237-21873313,21873738-21873932,21874487-21874559,
21874635-21874721,21874906-21875043,21875181-21875383,
21875469-21875631,21875861-21875992
Length = 789
Score = 31.9 bits (69), Expect = 0.36
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Frame = +1
Query: 106 RKGEKIDIDVYGKPTEKQLRELEHVRNLSKELQDNLHELENSVR-LAEVENQE-----MN 267
RK EK +D Q REL V+ LS EL++++ ELE S R LA ++ Q MN
Sbjct: 189 RKHEKY-LDEIEAFKNNQSRELHEVKCLSGELEESMAELEESRRKLAVLQLQTGGGSLMN 247
Query: 268 PTAPMLDYSEDHEFVSANQLDNCYGEEDKVDAREEEKRKLTN 393
+AP + + D G D DA EE K N
Sbjct: 248 TSAP---NGVNGSVSTDKSSDKGMGWRDLKDAVEEAKTLAAN 286
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 73 AQKMEKWVEAQRKGEKIDIDVYGKPTEKQLRELEHVRNLSKELQDNLHELENSVRLAEVE 252
A+K KW+ + + + ++ K + ELE RN +L++ E++N V E
Sbjct: 656 AEKELKWLRSATGSAEKEYEINQKKIAELKMELERERNERIKLEEEYEEVKNEVSELTSE 715
Query: 253 NQE 261
+E
Sbjct: 716 TEE 718
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 31.5 bits (68), Expect = 0.48
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +1
Query: 31 HSLEDSPLTDTSLTAQKMEKWVEAQRKGEKIDIDVYGKPTEKQLRELEHVRNLSKELQDN 210
+S++DS L +++K+ ++EAQ + +++ + T+ +ELEH ELQ++
Sbjct: 855 NSMKDSALLQQQKSSEKVS-YLEAQVLVVRSEMEKMVQKTQMLDQELEHKNKEISELQNS 913
Query: 211 LHELENSVRLAE 246
L E LAE
Sbjct: 914 LQEQVQKCILAE 925
>07_01_1058 - 9292890-9293655,9293831-9294600
Length = 511
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 61 TSLTAQKMEKWVEAQRKGEKIDIDVYGKPTEKQLRELEHVR-NLSKELQD 207
T ++ + M+ WV+ R+ +ID+ + K R L R NLSK L+D
Sbjct: 87 TLISGKAMQVWVDYDRETTRIDVTMAPLAVAKPKRPLVSARYNLSKLLKD 136
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +1
Query: 40 EDSPLTDTSLTAQKMEKWVEAQRKGEKIDIDVYGKPTEKQLRELEHVRNLSKELQDNLHE 219
E+ T T L + EK +E +R+ + + +G+ E+Q RELE R +EL+ E
Sbjct: 62 EEHEKTRTELEVK--EKQLEEERQNHTLTVQRHGEELERQSRELERQR---EELERQGRE 116
Query: 220 LE 225
L+
Sbjct: 117 LK 118
>05_01_0035 -
232656-232781,233212-233322,233419-233563,233749-233882,
234341-234412,234485-234548,234632-234699,234894-235129,
236857-237166,237495-238460,238752-238931,239041-239346,
239593-239727,239810-240046,240120-240308,240521-240709,
240929-241024,241117-241323,241700-241893,242979-243216
Length = 1400
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 157 QLRELEHVRNLSKELQDNLHELENSVRLAEVENQEMNPTAPMLDYSEDHEFVSANQLDNC 336
QLR+ V+ + + L+D HE+ +S+ L+ ++ + P L Y F+ N+ + C
Sbjct: 365 QLRQPNQVKKIFEFLKDGFHEVSSSLDLSFDDDSVADEKIPFLAYLA--SFLKENKYNPC 422
>12_01_0960 +
9554658-9554761,9554948-9555014,9555558-9555590,
9555676-9555729,9555914-9555930,9556881-9556980
Length = 124
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 160 IASQSVSRKRLCRSSPLSFGLRPTSPSSAPSDWYPSTENP 41
+ ++ V R RSSP + + +APSDW+ TENP
Sbjct: 7 VEARGVGRLNGRRSSPTASPI----DEAAPSDWFKGTENP 42
>07_03_1062 + 23668334-23669644,23670676-23670764,23671494-23671584
Length = 496
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -3
Query: 172 RVLAIASQSVSRKRLCRSSPLSFGLRPTSPSSAPSDW 62
RV +A+ S++R + R ++F L PTS S+APS W
Sbjct: 456 RVEPVAASSLARFIVLRC--VTFSLTPTSGSAAPSIW 490
>02_05_0232 +
27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 29.1 bits (62), Expect = 2.5
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 6/127 (4%)
Frame = +1
Query: 46 SPLTDTSLTAQKMEKWVEAQRKGEKIDIDVYGKPTEKQLRELEHVRNLSKELQDNLHELE 225
S L S A K+++ +K E + + + EKQ++E E L D LH++E
Sbjct: 401 SALQKASHFASKVKELENLYQK-EVMHRKITEEALEKQIQETEETERHCNALYDKLHDVE 459
Query: 226 NSVRLAEVENQEMNPT----APMLDYSEDHEFVSANQLDNCYG--EEDKVDAREEEKRKL 387
+ E EM L E+ +F ++ +E K + E++KL
Sbjct: 460 EQKLMVEQHITEMEAVLKEREDRLHDVEEQKFTVEQRITEMQAVLKEHKDKLHDVEEQKL 519
Query: 388 TNDGRIS 408
+ RI+
Sbjct: 520 MVEHRIT 526
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 28.7 bits (61), Expect = 3.4
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +1
Query: 79 KMEKWVEAQRKG--EKIDIDVYGKPTEKQLRELEH--VRNLSKELQDNLHELENSVRLAE 246
+++K VEA++K EK + + K + + H N E D E SV+ +E
Sbjct: 172 EIKKSVEAEKKQKEEKKEKRKHKKRHHHKSKSKRHHSSENSDSEESDGRDERRKSVQASE 231
Query: 247 VENQEMNPTAPMLDYSEDHEFVSANQLDNCYGEEDKVDAREEEKRKLTND 396
+ +E D+ +D E + + E+D+ ++EK+ D
Sbjct: 232 HKREEKRSRHDKKDHGQDSEDDERRKRRHATSEDDEPRKSQKEKKGQRED 281
>08_02_0203 - 14231134-14231907
Length = 257
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 139 GKPTEKQLRELEHVRNLSKELQDNLHELENSVRLAEVENQEMNPTA 276
G+P LR VR+ + ++D +HEL + R + ++E+ P A
Sbjct: 108 GEPPSPHLRLGYFVRSQERIIEDLMHELHRARRRIAILDREVEPRA 153
>04_04_1121 -
31041629-31041793,31041891-31042022,31042255-31042425,
31042521-31042622,31042703-31042807,31043115-31043286,
31043916-31043980,31044179-31044502,31044729-31044846,
31044928-31045011,31045472-31045603,31045714-31046570,
31046735-31046849,31047371-31047481,31047763-31047824
Length = 904
Score = 28.7 bits (61), Expect = 3.4
Identities = 22/131 (16%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Frame = +1
Query: 34 SLEDSPLTDTSLTAQKMEK-WVEAQRKGEKIDIDVYGKPTEKQLRELEHVRNLSKELQDN 210
S + +TD K++K W +++ E ++ + H + +D
Sbjct: 245 SKQGKDMTDMDFFKSKIKKNWSDSESDSEDSGDQSDHSTDDEDSSDESH----DADEKDE 300
Query: 211 LHELENSVRLAEVENQEMNPTAPMLDYSEDHEFVSANQLDNCYGEEDKVDAREEEKRKLT 390
+ ++S+ L + ++EM + + + + LD+ E+D + +EE +T
Sbjct: 301 IAHQKDSLNLKKNVDKEMTLEGSTVQEAGNSDNKEVENLDSQLKEDDNQEKEDEEAALIT 360
Query: 391 NDGRISLKASR 423
++ +++L+ R
Sbjct: 361 DEKKLALETGR 371
>03_04_0144 + 17677975-17678520,17679600-17679632
Length = 192
Score = 28.3 bits (60), Expect = 4.4
Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +3
Query: 54 DGYQSDGAEDGEVGRSPKERGEDRHRRLRETD*EAIARTR---ARQKLEQGAAGQFT*AG 224
DG EDG VGR E G R E + A AR R R +E G+ G+ AG
Sbjct: 22 DGVGRGAVEDGVVGRGMVEDGGG--GRAVEAEAAAAARCRVEAGRSAVEGGSGGR---AG 76
Query: 225 ELGAFGR 245
E G GR
Sbjct: 77 EGGGDGR 83
>02_01_0311 -
2075881-2076165,2076450-2076519,2076628-2076691,
2076798-2076837,2076930-2077006,2077095-2077311,
2077482-2078132
Length = 467
Score = 27.9 bits (59), Expect = 5.9
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = +1
Query: 157 QLRELEHVRNLSKELQDNLHELENSVRLAEVENQEMNPTAPMLDYSEDHEFVSANQLDNC 336
QLR EH R L K L++ E+ + E APM + +ED S+ L C
Sbjct: 379 QLRIEEHARYLQKILEEQQKARESISSMTSTTEGESPEFAPM-EKTEDKAETSSAPLSKC 437
Query: 337 YGEEDKVDAREEEKRKLT 390
+ + + K T
Sbjct: 438 RITDTDAECHSKVDNKKT 455
>05_03_0388 +
13401985-13402117,13404122-13404173,13405867-13405982,
13406080-13406247,13407047-13407255
Length = 225
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +1
Query: 202 QDNLHELENSVRLAEVENQEMNPTAPMLDYSEDHEFVSANQLDNCYGEEDKVDA 363
+DNL+E+E++ + + + P PM+D +D D C E +A
Sbjct: 70 EDNLYEIESNKPVRQKITEPKTPYHPMVD--DDGSLSPTRPFDKCLDETVNAEA 121
>04_04_0350 +
24591002-24591123,24592020-24592091,24592343-24592448,
24593138-24593242,24593693-24593815,24594163-24594630,
24595226-24595351,24595430-24595516,24595615-24595701,
24595807-24595903,24596519-24596636,24596923-24596995,
24597504-24597566,24597666-24597832,24598444-24598631,
24598909-24599057,24599193-24599442,24599597-24599855,
24599977-24600073,24606696-24606776,24606914-24606970,
24607264-24607395,24607476-24607562,24607941-24608049,
24608134-24608270,24608841-24608945,24609566-24609654,
24609757-24609859,24609960-24610064,24610282-24610293,
24611013-24611078
Length = 1279
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/67 (20%), Positives = 27/67 (40%)
Frame = +1
Query: 151 EKQLRELEHVRNLSKELQDNLHELENSVRLAEVENQEMNPTAPMLDYSEDHEFVSANQLD 330
+K + + + +R L E EN + N+E P +S H+ ++ D
Sbjct: 279 QKNIMKHDVIRETVPSLHVVAEETENDSKTVSTSNRENTSGTPERSFSSVHQLEDSDLSD 338
Query: 331 NCYGEED 351
+ +ED
Sbjct: 339 EDWNDED 345
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.130 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,229,468
Number of Sequences: 37544
Number of extensions: 197799
Number of successful extensions: 729
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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