Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_C09
         (561 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    29   0.10 
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    24   3.0  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   6.8  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    23   9.0  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       23   9.0  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 29.1 bits (62), Expect = 0.10
 Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
 Frame = +1

Query: 85  EKWVEAQRKGEKIDIDVYGKPTEKQLRELEHVRNLSKELQDNL-HELENSVRLAEVENQE 261
           +KW +A+R  E +  +   K T KQL EL+  R  S + Q  L  E++ +    +   + 
Sbjct: 214 QKWDKARRTLEYVIYETELKETRKQLEELDGQRKSSGDKQLLLTQEIQKAQDRLKNAQKA 273

Query: 262 MNPTAPMLDYSEDHEFVSANQLDNCYGEEDKVD 360
           +      +  ++D + V A +      E+ K+D
Sbjct: 274 LKDAKKDVVTAKDEKSVLATEHQQLLREKTKLD 306


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 121 SSPLSFGLRPTSPSSAPSDWYPSTENP 41
           +SP+S  + P SP S+ S   P + NP
Sbjct: 201 NSPISSHMGPNSPMSSVSSPGPISSNP 227


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
 Frame = +1

Query: 82  MEKWVEAQRKGEKIDIDVYGKPTEKQLREL-EHVRNLSK---ELQDNLHELENS 231
           ++ W  A    E ID++   + TE ++ EL ++  NL     EL +  H LE +
Sbjct: 84  VDDWPRAPNPREIIDLEARLEKTENEILELSQNAVNLKSNYLELTELKHVLERT 137


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 289 YSEDHEFVSANQLDNCYGEEDKVDAREE 372
           Y   +EF + +  DNC  E D+V  RE+
Sbjct: 164 YVRFNEF-NTSSADNCTTENDEVICRED 190


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
 Frame = +1

Query: 85  EKWVEAQRKGEKIDIDVYGKPTEKQLRELEHVRNLSKELQD-NLHELENSVRLAEVENQE 261
           EK  +   KG+K+    Y     K  R ++   N     +D    E+E+    A   +++
Sbjct: 24  EKRSKLDPKGKKLMFVGYAD-NHKAFRFVDPTSNKITLSRDAKFIEMEDFEHAAINRSKK 82

Query: 262 MNPTAPMLDYSEDHEFVSANQLDNCYGEEDKVDAREEEKRKLTND 396
            NP     ++ +D  F   +  D+    +D V  R E + + + D
Sbjct: 83  TNPQIVEYEFDDDLPFDDDSDFDDDSDFDDDVGDRLESEEEDSTD 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.130    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,733
Number of Sequences: 2352
Number of extensions: 6584
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)