Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_C05
         (578 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    31   0.027
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    27   0.33 
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   1.3  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.3  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    24   4.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   5.4  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 31.1 bits (67), Expect = 0.027
 Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
 Frame = +3

Query: 330 MTTVKKDVEGLNDRIKDLGEKSSQDFENLLKRATPYFKRIDDDFRAEWDKFYKEIS-VDK 506
           +TTV+  + GL +R+K     S  D E   K    Y +++ +DF  E D+   +IS +++
Sbjct: 711 LTTVESQIRGLENRLK----YSMNDLETSKKNINEYDRQL-EDFTRELDQIGPKISEIER 765

Query: 507 VFKEFSHTLNEVLHYLAKIIDEV 575
             ++    + ++   +  + D+V
Sbjct: 766 RMQQRDMKIQDIKESMNNVEDDV 788


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 27.5 bits (58), Expect = 0.33
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +3

Query: 423 RATPYFKRIDDDFRAEWDKFYKEISVDKVFKEFSHTLNEVL 545
           R T Y K      RA+W  FY+  SVD+  + F+  L   L
Sbjct: 280 RLTDYRKLNSILSRADWSFFYQCTSVDEAVQSFNALLTSAL 320


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 403  SWLDFSPRSLMRSFRPSTSFLTVVIK*LKLSLEAPY 296
            SWL+FS R+      P  SF+ V ++ L  +   PY
Sbjct: 1024 SWLNFSVRAADTGTPPRASFVEVFVQVLDENDNNPY 1059


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +3

Query: 366  DRIKDLGEKSSQDFENLLKRATPYFKRIDDDFRAEWDKFYKEISVDKVF 512
            +R      ++ + F +L+K+   YF+  +D F     KFY++  V   F
Sbjct: 1044 ERFFAFNNQTIEQFPSLVKK---YFEDFEDGFAYNMTKFYQQNVVTMAF 1089


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 207 DISADLILSGSKKNIAHGALFLKDNTIKSEYG 302
           DI    +LS ++KN+    +F++DN  K   G
Sbjct: 131 DILDTHLLSHARKNLPRSWMFMQDNDSKHTSG 162


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = -2

Query: 505 LSTEISL*NLSHSALKSSSIRLK-----YGVARFRRFSKSWLDFSPRS 377
           LS+EIS     H  + S ++RLK     + +  F + S SW    P S
Sbjct: 194 LSSEISTLRSLHDCISSFTLRLKPSDLLFVIGDFNQPSISWSTADPSS 241


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,760
Number of Sequences: 2352
Number of extensions: 12020
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)