Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_C04
         (539 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   2.1  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    24   2.8  
AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive ...    24   2.8  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   6.5  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   8.7  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = -3

Query: 342 RVGYTKRPQHAYCVH*TSTARVLRTLNVHGTHIAYTKRPQRAYRVQRVQEPPAA 181
           +VG T     AYC       R+L+ L +   +   T      Y V+ V E PAA
Sbjct: 89  KVGLTNYAA-AYCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEPVDEGPAA 141


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +2

Query: 104 HRTKHINSVTGQSNIL*ETFRTQYAHAAGGSCTRC 208
           HR KH ++    S  L    R ++ H     CT C
Sbjct: 183 HRCKHCDNCFTTSGELIRHIRYRHTHERPHKCTEC 217


>AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR9 protein.
          Length = 184

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 254 PWTFSV-RNTRAVDV**TQYACCGRLVYPTRVL 349
           PW  ++ +  +A+D     Y C G L++P+ VL
Sbjct: 77  PWMVAILKEEKALDQVINVYQCGGSLIHPSVVL 109


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 516 PIVHR*YIEMLPK 478
           P VHR +IE+LPK
Sbjct: 338 PWVHRVFIELLPK 350


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 150 CKRHFVRNTRTLRAVPVR 203
           CK+ FVR T   + +P+R
Sbjct: 97  CKKGFVRKTEFGKCIPLR 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,413
Number of Sequences: 2352
Number of extensions: 10242
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)