Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_C03
         (588 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         27   0.45 
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   9.7  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 27.1 bits (57), Expect = 0.45
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = +2

Query: 416 VRNDSVSINELQELKTQILNLLDHP---PDVTVIVNKLTFAPCMYILSVY 556
           V  D+++  E QE++ +ILNLL  P   P V  + + +  +   ++L+VY
Sbjct: 48  VLEDTLTYEEQQEIENEILNLLGLPGPRPAVRHLHSSVGKSAPQFLLNVY 97


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 143 KLSEPAPVTGP*RVHHPDRAARTAPTALSTARG 45
           K +   P TG   +++ +  + T+P  LSTA G
Sbjct: 127 KYASEGPSTGTNVINNNNNNSTTSPQDLSTASG 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,762
Number of Sequences: 2352
Number of extensions: 11373
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)