Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_C03
         (588 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF012872-1|AAD13352.1| 2044|Homo sapiens phosphatidylinositol 4-...   218   1e-56
AB210002-1|BAE06084.1| 2121|Homo sapiens PIK4CA variant protein ...   218   1e-56
AF320837-1|AAG42482.1|  125|Homo sapiens immunoglobulin light ch...    30   7.0  

>AF012872-1|AAD13352.1| 2044|Homo sapiens phosphatidylinositol
            4-kinase 230 protein.
          Length = 2044

 Score =  218 bits (532), Expect = 1e-56
 Identities = 115/197 (58%), Positives = 140/197 (71%), Gaps = 4/197 (2%)
 Frame = +2

Query: 8    ANIAANVRGINAXXXXXXXXXXXFVQLGLGGERATDRSP--APVLKASSSAGNLGVLIPV 181
            ANIAAN++  +            FVQLGL G+RA++R+    P LKASSSAGNLGVLIPV
Sbjct: 656  ANIAANIQDEHLVDELLMNLLELFVQLGLEGKRASERASEKGPALKASSSAGNLGVLIPV 715

Query: 182  IAVLVKRLPPIKNPKPRLHKLFKDFWLYCVVMGFTAAESGLWPKEWYAGVKEIAVKSPFL 361
            IAVL +RLPPIK  KPRL KLF+DFWLY V+MGF    SGLWP+EWY GV EIA KSP L
Sbjct: 716  IAVLTRRLPPIKEAKPRLQKLFRDFWLYSVLMGFAVEGSGLWPEEWYEGVCEIATKSPLL 775

Query: 362  V--SQTSLRSEMRELQYTSAVRNDSVSINELQELKTQILNLLDHPPDVTVIVNKLTFAPC 535
               S+  LRS    LQY SA++ND+V+  EL EL++ I+NLLD PP+V+ ++NKL FA  
Sbjct: 776  TFPSKEPLRS---VLQYNSAMKNDTVTPAELSELRSTIINLLDPPPEVSALINKLDFAMS 832

Query: 536  MYILSVYWLETLRVCNS 586
             Y+LSVY LE +RV  S
Sbjct: 833  TYLLSVYRLEYMRVLRS 849


>AB210002-1|BAE06084.1| 2121|Homo sapiens PIK4CA variant protein
            protein.
          Length = 2121

 Score =  218 bits (532), Expect = 1e-56
 Identities = 115/197 (58%), Positives = 140/197 (71%), Gaps = 4/197 (2%)
 Frame = +2

Query: 8    ANIAANVRGINAXXXXXXXXXXXFVQLGLGGERATDRSP--APVLKASSSAGNLGVLIPV 181
            ANIAAN++  +            FVQLGL G+RA++R+    P LKASSSAGNLGVLIPV
Sbjct: 733  ANIAANIQDEHLVDELLMNLLELFVQLGLEGKRASERASEKGPALKASSSAGNLGVLIPV 792

Query: 182  IAVLVKRLPPIKNPKPRLHKLFKDFWLYCVVMGFTAAESGLWPKEWYAGVKEIAVKSPFL 361
            IAVL +RLPPIK  KPRL KLF+DFWLY V+MGF    SGLWP+EWY GV EIA KSP L
Sbjct: 793  IAVLTRRLPPIKEAKPRLQKLFRDFWLYSVLMGFAVEGSGLWPEEWYEGVCEIATKSPLL 852

Query: 362  V--SQTSLRSEMRELQYTSAVRNDSVSINELQELKTQILNLLDHPPDVTVIVNKLTFAPC 535
               S+  LRS    LQY SA++ND+V+  EL EL++ I+NLLD PP+V+ ++NKL FA  
Sbjct: 853  TFPSKEPLRS---VLQYNSAMKNDTVTPAELSELRSTIINLLDPPPEVSALINKLDFAMS 909

Query: 536  MYILSVYWLETLRVCNS 586
             Y+LSVY LE +RV  S
Sbjct: 910  TYLLSVYRLEYMRVLRS 926


>AF320837-1|AAG42482.1|  125|Homo sapiens immunoglobulin light chain
           lambda 6 protein.
          Length = 125

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 6/31 (19%)
 Frame = +3

Query: 219 TQSPGYT---NCLRTSGYIAS---LWVLQRP 293
           ++SPG T   +C RTSGYIAS    W  QRP
Sbjct: 11  SESPGKTITISCTRTSGYIASNYVQWYQQRP 41


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,637,943
Number of Sequences: 237096
Number of extensions: 1733249
Number of successful extensions: 4416
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4412
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)