Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_C02
(525 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces... 116 2e-27
SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger protein|Schiz... 53 2e-08
SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit Air1|Schi... 53 3e-08
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 41 1e-04
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 34 0.011
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 34 0.011
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 32 0.046
SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor Fep1|Sc... 30 0.24
SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo... 27 1.3
SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family |Schizos... 27 1.7
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 26 3.0
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 26 4.0
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 26 4.0
SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster... 25 5.2
SPAPB17E12.10c |||SAM-dependent methyltransferase|Schizosaccharo... 25 6.9
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 25 9.1
>SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 179
Score = 116 bits (279), Expect = 2e-27
Identities = 61/149 (40%), Positives = 76/149 (51%), Gaps = 13/149 (8%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE--EADRCYRCNG 280
CY C GH ARECT+G + C+ CN+TGH A +C E + CY C
Sbjct: 19 CYNCGENGHQARECTKGSI-------------CYNCNQTGHKASECTEPQQEKTCYACGT 65
Query: 281 TGHIARECAQSPDE---PSCYNCNKTGHIARNC-----PEGGR---DNSNQTCYNCNKGS 427
GH+ R+C SP+ CY C + GHIAR+C GGR SN CY C
Sbjct: 66 AGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACG-SY 124
Query: 428 GHISRNCPDGTKTCYVCGKPGHISRDCDE 514
GH +R+C G K CY CGK GH S +C +
Sbjct: 125 GHQARDCTMGVK-CYSCGKIGHRSFECQQ 152
Score = 98.3 bits (234), Expect = 6e-22
Identities = 45/120 (37%), Positives = 60/120 (50%), Gaps = 13/120 (10%)
Frame = +2
Query: 188 RQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARN 367
R +C+ C GH AR+C + CY CN TGH A EC + E +CY C GH+ R+
Sbjct: 14 RPGPRCYNCGENGHQARECTK-GSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRD 72
Query: 368 CPEGGRDNSNQTCYNCNKGSGHISRNC-PDGTKT------------CYVCGKPGHISRDC 508
CP CY C + GHI+R+C +G ++ CY CG GH +RDC
Sbjct: 73 CPSSPNPRQGAECYKCGR-VGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDC 131
Score = 97.9 bits (233), Expect = 8e-22
Identities = 54/154 (35%), Positives = 74/154 (48%), Gaps = 18/154 (11%)
Frame = +2
Query: 101 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC-----KEEADRC 265
S+CY CN+TGH A ECT+ +Q + C+ C GH RDC + C
Sbjct: 36 SICYNCNQTGHKASECTE----------PQQEKTCYACGTAGHLVRDCPSSPNPRQGAEC 85
Query: 266 YRCNGTGHIARECAQSPDEP-----------SCYNCNKTGHIARNCPEGGRDNSNQTCYN 412
Y+C GHIAR+C + + +CY C GH AR+C G + CY+
Sbjct: 86 YKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGVK------CYS 139
Query: 413 CNKGSGHISRNCPDGT--KTCYVCGKPGHISRDC 508
C K GH S C + + CY C +PGHI+ +C
Sbjct: 140 CGK-IGHRSFECQQASDGQLCYKCNQPGHIAVNC 172
Score = 70.9 bits (166), Expect = 1e-13
Identities = 32/69 (46%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +2
Query: 323 PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNC--PDGTKTCYVCGKPGHI 496
P CYNC + GH AR C +G CYNCN+ +GH + C P KTCY CG GH+
Sbjct: 17 PRCYNCGENGHQARECTKGS------ICYNCNQ-TGHKASECTEPQQEKTCYACGTAGHL 69
Query: 497 SRDCDEERN 523
RDC N
Sbjct: 70 VRDCPSSPN 78
Score = 54.8 bits (126), Expect = 7e-09
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 95 SSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD--RCY 268
S+ CY C GH AR+CT G KC+ C + GH + +C++ +D CY
Sbjct: 114 SNMNCYACGSYGHQARDCTMG-------------VKCYSCGKIGHRSFECQQASDGQLCY 160
Query: 269 RCNGTGHIAREC 304
+CN GHIA C
Sbjct: 161 KCNQPGHIAVNC 172
Score = 30.7 bits (66), Expect = 0.14
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 104 VCYKCNRTGHFARECT 151
+CYKCN+ GH A CT
Sbjct: 158 LCYKCNQPGHIAVNCT 173
>SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 218
Score = 53.2 bits (122), Expect = 2e-08
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Frame = +2
Query: 188 RQREK-CFKCNRTGHFARDCKEEADR---CYRCNGTGHIARECA-QSPDE-PSCYNCNKT 349
R R+K CF C + GH +DC E D C+RC H C+ + P + C+ C++
Sbjct: 73 RNRDKFCFACRQQGHIVQDCPEAKDNVSICFRCGSKEHSLNACSKKGPLKFAKCFICHEN 132
Query: 350 GHIARNCPEG--GRDNSNQTCYNCNKGSGHISRNCPDGTK 463
GH++ C + G C C+ H++++C K
Sbjct: 133 GHLSGQCEQNPKGLYPKGGCCKFCS-SVHHLAKDCDQVNK 171
Score = 49.6 bits (113), Expect = 3e-07
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD----RCYRC 274
C+ C + GH ++C + A+D CF+C H C ++ +C+ C
Sbjct: 79 CFACRQQGHIVQDCPE----AKD-----NVSICFRCGSKEHSLNACSKKGPLKFAKCFIC 129
Query: 275 NGTGHIARECAQSPD--EPS---CYNCNKTGHIARNCPEGGRDN 391
+ GH++ +C Q+P P C C+ H+A++C + +D+
Sbjct: 130 HENGHLSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDCDQVNKDD 173
Score = 46.8 bits (106), Expect = 2e-06
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +2
Query: 296 RECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHI---SRNCPDGTKT 466
R Q + C+ C + GHI ++CPE +DN + C+ C + S+ P
Sbjct: 68 RRINQRNRDKFCFACRQQGHIVQDCPE-AKDNVS-ICFRCGSKEHSLNACSKKGPLKFAK 125
Query: 467 CYVCGKPGHISRDCDE 514
C++C + GH+S C++
Sbjct: 126 CFICHENGHLSGQCEQ 141
Score = 37.5 bits (83), Expect = 0.001
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Frame = +2
Query: 86 SKMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE----- 250
+K + S+C++C H C++ G + KCF C+ GH + C++
Sbjct: 95 AKDNVSICFRCGSKEHSLNACSKKG--------PLKFAKCFICHENGHLSGQCEQNPKGL 146
Query: 251 --EADRCYRCNGTGHIARECAQ 310
+ C C+ H+A++C Q
Sbjct: 147 YPKGGCCKFCSSVHHLAKDCDQ 168
Score = 28.3 bits (60), Expect = 0.74
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 461 KTCYVCGKPGHISRDCDEERN 523
K C+ C + GHI +DC E ++
Sbjct: 77 KFCFACRQQGHIVQDCPEAKD 97
>SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit
Air1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 313
Score = 52.8 bits (121), Expect = 3e-08
Identities = 26/64 (40%), Positives = 32/64 (50%)
Frame = +2
Query: 329 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
C+NC GHI+++CP + C C HIS CP TK C CG GHI+ C
Sbjct: 89 CHNCKGNGHISKDCP-------HVLCTTCGAIDDHISVRCP-WTKKCMNCGLLGHIAARC 140
Query: 509 DEER 520
E R
Sbjct: 141 SEPR 144
Score = 47.6 bits (108), Expect = 1e-06
Identities = 35/121 (28%), Positives = 42/121 (34%), Gaps = 19/121 (15%)
Frame = +2
Query: 203 CFKCNRTGHFARDCKEEADRCYRCNGTG-HIARECAQSPDEPSCYNCNKTGHIARNCPEG 379
C C GH ++DC C C HI+ C P C NC GHIA C E
Sbjct: 89 CHNCKGNGHISKDCPHVL--CTTCGAIDDHISVRC---PWTKKCMNCGLLGHIAARCSEP 143
Query: 380 GRDNSNQTCYNCNKGSGHISRNCP------------------DGTKTCYVCGKPGHISRD 505
R + C C+ + H S CP + K CY C H D
Sbjct: 144 -RKRGPRVCRTCHTDT-HTSSTCPLIWRYYVEKEHPVRIDVSEVRKFCYNCASDEHFGDD 201
Query: 506 C 508
C
Sbjct: 202 C 202
Score = 43.2 bits (97), Expect = 2e-05
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Frame = +2
Query: 215 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNK-TGHIARNCPEGGRDN 391
+R +F D E+ C+ C G GHI+++C C C HI+ CP
Sbjct: 74 SRGRYFGSD-PSESIVCHNCKGNGHISKDC----PHVLCTTCGAIDDHISVRCP------ 122
Query: 392 SNQTCYNCNKGSGHISRNCPD----GTKTCYVCGKPGHISRDC 508
+ C NC GHI+ C + G + C C H S C
Sbjct: 123 WTKKCMNCGL-LGHIAARCSEPRKRGPRVCRTCHTDTHTSSTC 164
Score = 40.3 bits (90), Expect = 2e-04
Identities = 37/146 (25%), Positives = 49/146 (33%), Gaps = 26/146 (17%)
Frame = +2
Query: 98 SSVCYKCNRTGHFARECTQ---GGVGARDAGFNRQ---REKCFKCNRTGHFARDCKEEAD 259
S VC+ C GH +++C GA D + + +KC C GH A C E
Sbjct: 86 SIVCHNCKGNGHISKDCPHVLCTTCGAIDDHISVRCPWTKKCMNCGLLGHIAARCSEPRK 145
Query: 260 R----CYRCNGTGHIARECA----------------QSPDEPSCYNCNKTGHIARNCPEG 379
R C C+ H + C S CYNC H +C
Sbjct: 146 RGPRVCRTCHTDTHTSSTCPLIWRYYVEKEHPVRIDVSEVRKFCYNCASDEHFGDDCTLP 205
Query: 380 GRDNSNQTCYNCNKGSGHISRNCPDG 457
R N ++ C NCP G
Sbjct: 206 SRSNYPESTAFC-------EANCPSG 224
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 41.1 bits (92), Expect = 1e-04
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = +2
Query: 383 RDNSNQTCYNCNKGSGHISRNCPDGTK-----TCYVCGKPGHISRDC 508
RD+ NQ C NC GH +CP+ C CG GHI+RDC
Sbjct: 304 RDDENQVCQNCGN-VGHRRFDCPERINHTMNIVCRHCGSIGHIARDC 349
Score = 41.1 bits (92), Expect = 1e-04
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 329 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNCP 451
C NC GH +CPE N C +C GHI+R+CP
Sbjct: 311 CQNCGNVGHRRFDCPERINHTMNIVCRHCG-SIGHIARDCP 350
Score = 36.7 bits (81), Expect = 0.002
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Frame = +2
Query: 191 QREKCFKCNRTGHFARDCKEEADR-----CYRCNGTGHIARECAQSPDEP 325
+ + C C GH DC E + C C GHIAR+C +P
Sbjct: 307 ENQVCQNCGNVGHRRFDCPERINHTMNIVCRHCGSIGHIARDCPVRDQQP 356
Score = 26.2 bits (55), Expect = 3.0
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = +2
Query: 98 SSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC 244
+ VC C GH +C + + C C GH ARDC
Sbjct: 308 NQVCQNCGNVGHRRFDCP-------ERINHTMNIVCRHCGSIGHIARDC 349
Score = 25.0 bits (52), Expect = 6.9
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 452 DGTKTCYVCGKPGHISRDCDEERN 523
D + C CG GH DC E N
Sbjct: 306 DENQVCQNCGNVGHRRFDCPERIN 329
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 34.3 bits (75), Expect = 0.011
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
Frame = +2
Query: 404 CYNCNKGS------GHISRNCPDGTKTCYVCGKPGHISRDC 508
C +C G+ H + CP TCY CGK H R+C
Sbjct: 1779 CLSCTLGNPDTEIRAHTGKACPVRLSTCYKCGKADHNLREC 1819
Score = 27.5 bits (58), Expect = 1.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 101 SVCYKCNRTGHFAREC 148
S CYKC + H REC
Sbjct: 1804 STCYKCGKADHNLREC 1819
Score = 27.1 bits (57), Expect = 1.7
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = +2
Query: 227 HFARDCKEEADRCYRCNGTGHIAREC 304
H + C CY+C H REC
Sbjct: 1794 HTGKACPVRLSTCYKCGKADHNLREC 1819
Score = 25.0 bits (52), Expect = 6.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 203 CFKCNRTGHFARDCK 247
C+KC + H R+CK
Sbjct: 1806 CYKCGKADHNLRECK 1820
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 34.3 bits (75), Expect = 0.011
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
Frame = +2
Query: 404 CYNCNKGS------GHISRNCPDGTKTCYVCGKPGHISRDC 508
C +C G+ H + CP TCY CGK H R+C
Sbjct: 1779 CLSCTLGNPDTEIRAHTGKACPVRLSTCYKCGKADHNLREC 1819
Score = 27.5 bits (58), Expect = 1.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 101 SVCYKCNRTGHFAREC 148
S CYKC + H REC
Sbjct: 1804 STCYKCGKADHNLREC 1819
Score = 27.1 bits (57), Expect = 1.7
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = +2
Query: 227 HFARDCKEEADRCYRCNGTGHIAREC 304
H + C CY+C H REC
Sbjct: 1794 HTGKACPVRLSTCYKCGKADHNLREC 1819
Score = 25.0 bits (52), Expect = 6.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 203 CFKCNRTGHFARDCK 247
C+KC + H R+CK
Sbjct: 1806 CYKCGKADHNLRECK 1820
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 32.3 bits (70), Expect = 0.046
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = +2
Query: 308 QSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTKTCYVCG 481
++ ++P+ N + N N TC NC + + R PDG C CG
Sbjct: 603 KNAEKPTVSNAAEDKKGDANTRRANATNPTPTCTNCQTRTTPLWRRSPDGQPLCNACG 660
>SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor
Fep1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 564
Score = 29.9 bits (64), Expect = 0.24
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 398 QTCYNCNKGSGHISRNCPDGTKTCYVCG 481
Q+C NC+K + + R PD + C CG
Sbjct: 10 QSCSNCHKTTTSLWRRGPDNSLLCNACG 37
>SPBC31F10.10c |||zf-MYND type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 27.5 bits (58), Expect = 1.3
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +2
Query: 185 NRQREKCFKCNRTGHFARDCKEEA 256
+RQ KC +C RT + +++C+ +A
Sbjct: 492 SRQFAKCRRCRRTKYCSKECQHQA 515
>SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 5/37 (13%)
Frame = +2
Query: 296 RECAQSPDEPS-----CYNCNKTGHIARNCPEGGRDN 391
R A PD+P CY C + GH + CP N
Sbjct: 169 RIAASVPDKPPPPGYICYRCGQKGHWIQACPTNADPN 205
Score = 26.6 bits (56), Expect = 2.3
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 203 CFKCNRTGHFARDCKEEADRCY----RCNGTGHIARECAQSPDEPS 328
C++C + GH+ + C AD Y R T I R ++ + P+
Sbjct: 185 CYRCGQKGHWIQACPTNADPNYDGKPRVKRTTGIPRSFLKNVERPA 230
Score = 25.4 bits (53), Expect = 5.2
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +2
Query: 104 VCYKCNRTGHFAREC 148
+CY+C + GH+ + C
Sbjct: 184 ICYRCGQKGHWIQAC 198
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 122 CCTCSIRLNSFSIRCITC 69
C TC R+N SIRC++C
Sbjct: 38 CSTCK-RINKRSIRCLSC 54
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.8 bits (54), Expect = 4.0
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -2
Query: 284 PCHYICSNGQPPPCSRAQSARCGC 213
PC +C G PPC+ C C
Sbjct: 293 PCPLLCHPGPCPPCTATVEKFCLC 316
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 25.8 bits (54), Expect = 4.0
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +2
Query: 308 QSPDEPSCYNCNKTGHIARN--CPEGGR 385
+ P C NC + GH+ N CP GR
Sbjct: 940 RKPTTRKCSNCGQVGHMKTNKICPLFGR 967
>SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 524 NSAPRRSRERYVRACRRRSKSWCRRGSCARC 432
N A + R R CRRR R+ C+RC
Sbjct: 7 NRAHKNIRARSCLRCRRRKVKCDRQYPCSRC 37
>SPAPB17E12.10c |||SAM-dependent
methyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 25.0 bits (52), Expect = 6.9
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +2
Query: 182 FNRQREKCFKCNRTGHFARDCKEEADRCYRCNG 280
F CFKC + F K+E Y C+G
Sbjct: 257 FAEDLSMCFKCVKKIQFKTKIKDELYAVYFCSG 289
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 24.6 bits (51), Expect = 9.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 225 PVRLHLKHFSRCRLKPASRAPTPPCVHS 142
PVR ++ R +LKP+ AP PP +++
Sbjct: 29 PVRYEVEDDLR-KLKPSRTAPKPPAINT 55
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,682,797
Number of Sequences: 5004
Number of extensions: 30199
Number of successful extensions: 190
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 214353836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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