Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_C02
(525 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 103 1e-22
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 75 4e-14
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 75 4e-14
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 75 4e-14
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 73 1e-13
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 73 1e-13
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 73 1e-13
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 66 1e-11
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 66 1e-11
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 43 1e-04
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 43 1e-04
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 43 1e-04
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 43 1e-04
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 43 1e-04
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 43 2e-04
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 38 0.003
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 38 0.003
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.008
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 36 0.018
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 36 0.018
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 33 0.095
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 33 0.095
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 33 0.095
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 33 0.095
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 33 0.13
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 33 0.17
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 33 0.17
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 32 0.22
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 32 0.22
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 32 0.22
AL110485-23|CAB60377.3| 770|Caenorhabditis elegans Hypothetical... 32 0.29
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 32 0.29
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 31 0.50
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 31 0.50
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 31 0.50
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 31 0.67
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 31 0.67
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 30 0.88
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 30 0.88
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 30 0.88
Z54281-2|CAA91045.3| 399|Caenorhabditis elegans Hypothetical pr... 30 1.2
U28741-4|AAA68328.1| 747|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 30 1.2
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 29 1.5
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 1.5
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.0
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 29 2.0
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 2.0
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 29 2.0
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 28 3.6
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 28 3.6
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 28 4.7
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 28 4.7
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 27 6.2
U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family ... 27 6.2
U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family ... 27 6.2
U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcript... 27 6.2
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 27 6.2
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 8.2
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 8.2
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 8.2
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 103 bits (246), Expect = 1e-22
Identities = 61/161 (37%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Frame = +2
Query: 92 MSSSVCYKCNRTGHFARECTQG-GVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD--- 259
MS CYKC + GH +R C G G R G C+ C TGHF+RDC +
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRGGGG--GSTCYNCQETGHFSRDCPKGGSGGG 58
Query: 260 ---------RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYN 412
CY C G GH +R+C PS + +G E GR Q CYN
Sbjct: 59 QRGGGGGGGSCYNCGGRGHYSRDC------PSARSEGGSGGYGGRGGE-GRSFGGQKCYN 111
Query: 413 CNKGSGHISRNCPDG----TKTCYVCGKPGHISRDCDEERN 523
C + SGHISR C + K CY C + GHISRDC + N
Sbjct: 112 CGR-SGHISRECTESGSAEEKRCYQCQETGHISRDCPSQTN 151
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 74.5 bits (175), Expect = 4e-14
Identities = 45/132 (34%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Frame = +2
Query: 158 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--P 316
G G +D G + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 360 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKP 417
Query: 317 DE-----PSCYNCNKTGHIARNCPEGGRDNSNQ---TCYNCNKGSGHISRNCPDGTKTCY 472
E S + G EG +N + C+NC KG GH S CP+ + C+
Sbjct: 418 REGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNC-KGEGHRSAECPEPPRGCF 476
Query: 473 VCGKPGHISRDC 508
CG+ GH S +C
Sbjct: 477 NCGEQGHRSNEC 488
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 104 VCYKCNRTGHFARECTQ-----GGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 268
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 269 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 373
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.0 bits (134), Expect = 4e-09
Identities = 47/165 (28%), Positives = 66/165 (40%), Gaps = 27/165 (16%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCN-- 277
C+ C + GH + +C + R+ C+ C + GH +RDC +E R R
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 278 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RDNSNQ 400
GTG + + S + G + GG R N
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 401 TCYNCNKGSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 520
C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 372 NCFNCQQ-PGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 55.2 bits (127), Expect = 3e-08
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 15/135 (11%)
Frame = +2
Query: 104 VCYKCNRTGHFARECTQ--------GGVGARDAGF--NRQREKCFKCNRTGHFARDCKEE 253
VCY C + GH +R+C + G +GF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 254 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCN 418
+ + N G + Q E +C+NC + GH + +CPE ++ + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 419 KGSGHISRNCPDGTK 463
+ GH SR+CP+ K
Sbjct: 403 Q-PGHNSRDCPEERK 416
Score = 54.4 bits (125), Expect = 5e-08
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Frame = +2
Query: 221 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDN 391
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 392 SNQTCYNCNKGSGH-----------ISRNCPDGTKTCYVCGKPGHISRDCDE 514
+ + G G+ N G C+ C GH S +C E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Frame = +2
Query: 377 GGRDNS--NQTCYNCNKGSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 520
GG+D N C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 248 GGQDRGERNNNCFNCQQ-PGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 53.2 bits (122), Expect = 1e-07
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +2
Query: 326 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTK 463
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQ-PGHNSRDCPEERK 302
Score = 47.2 bits (107), Expect = 7e-06
Identities = 43/147 (29%), Positives = 62/147 (42%), Gaps = 26/147 (17%)
Frame = +2
Query: 158 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SP 316
G G +D G + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 246 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKP 303
Query: 317 DE--------PSCY---NCNKTGHIARNCPEGGRDNSNQTCY-------NCNK-GSGHIS 439
E S + N TG + G N+ ++ + N N GSG
Sbjct: 304 REGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGG 363
Query: 440 RNCPDGTKTCYVCGKPGHISRDCDEER 520
++ + C+ C +PGH S DC E +
Sbjct: 364 QDRGERNNNCFNCQQPGHRSNDCPEPK 390
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 221 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 376
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 30.7 bits (66), Expect = 0.67
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 422 GSGHISRNCPDGTKTCYVCGKPGHISRDCDEER 520
GSG ++ + C+ C +PGH S DC E +
Sbjct: 244 GSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPK 276
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 74.5 bits (175), Expect = 4e-14
Identities = 45/132 (34%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Frame = +2
Query: 158 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--P 316
G G +D G + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 360 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKP 417
Query: 317 DE-----PSCYNCNKTGHIARNCPEGGRDNSNQ---TCYNCNKGSGHISRNCPDGTKTCY 472
E S + G EG +N + C+NC KG GH S CP+ + C+
Sbjct: 418 REGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNC-KGEGHRSAECPEPPRGCF 476
Query: 473 VCGKPGHISRDC 508
CG+ GH S +C
Sbjct: 477 NCGEQGHRSNEC 488
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 104 VCYKCNRTGHFARECTQ-----GGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 268
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 269 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 373
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.0 bits (134), Expect = 4e-09
Identities = 47/165 (28%), Positives = 66/165 (40%), Gaps = 27/165 (16%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCN-- 277
C+ C + GH + +C + R+ C+ C + GH +RDC +E R R
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 278 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RDNSNQ 400
GTG + + S + G + GG R N
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 401 TCYNCNKGSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 520
C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 372 NCFNCQQ-PGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 55.2 bits (127), Expect = 3e-08
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 15/135 (11%)
Frame = +2
Query: 104 VCYKCNRTGHFARECTQ--------GGVGARDAGF--NRQREKCFKCNRTGHFARDCKEE 253
VCY C + GH +R+C + G +GF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 254 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCN 418
+ + N G + Q E +C+NC + GH + +CPE ++ + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 419 KGSGHISRNCPDGTK 463
+ GH SR+CP+ K
Sbjct: 403 Q-PGHNSRDCPEERK 416
Score = 54.4 bits (125), Expect = 5e-08
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Frame = +2
Query: 221 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDN 391
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 392 SNQTCYNCNKGSGH-----------ISRNCPDGTKTCYVCGKPGHISRDCDE 514
+ + G G+ N G C+ C GH S +C E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Frame = +2
Query: 377 GGRDNS--NQTCYNCNKGSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 520
GG+D N C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 248 GGQDRGERNNNCFNCQQ-PGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 53.2 bits (122), Expect = 1e-07
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +2
Query: 326 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTK 463
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQ-PGHNSRDCPEERK 302
Score = 47.2 bits (107), Expect = 7e-06
Identities = 43/147 (29%), Positives = 62/147 (42%), Gaps = 26/147 (17%)
Frame = +2
Query: 158 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SP 316
G G +D G + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 246 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKP 303
Query: 317 DE--------PSCY---NCNKTGHIARNCPEGGRDNSNQTCY-------NCNK-GSGHIS 439
E S + N TG + G N+ ++ + N N GSG
Sbjct: 304 REGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGG 363
Query: 440 RNCPDGTKTCYVCGKPGHISRDCDEER 520
++ + C+ C +PGH S DC E +
Sbjct: 364 QDRGERNNNCFNCQQPGHRSNDCPEPK 390
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 221 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 376
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 30.7 bits (66), Expect = 0.67
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 422 GSGHISRNCPDGTKTCYVCGKPGHISRDCDEER 520
GSG ++ + C+ C +PGH S DC E +
Sbjct: 244 GSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPK 276
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 74.5 bits (175), Expect = 4e-14
Identities = 45/132 (34%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Frame = +2
Query: 158 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--P 316
G G +D G + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 360 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKP 417
Query: 317 DE-----PSCYNCNKTGHIARNCPEGGRDNSNQ---TCYNCNKGSGHISRNCPDGTKTCY 472
E S + G EG +N + C+NC KG GH S CP+ + C+
Sbjct: 418 REGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNC-KGEGHRSAECPEPPRGCF 476
Query: 473 VCGKPGHISRDC 508
CG+ GH S +C
Sbjct: 477 NCGEQGHRSNEC 488
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 104 VCYKCNRTGHFARECTQ-----GGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 268
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 269 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 373
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.0 bits (134), Expect = 4e-09
Identities = 47/165 (28%), Positives = 66/165 (40%), Gaps = 27/165 (16%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCN-- 277
C+ C + GH + +C + R+ C+ C + GH +RDC +E R R
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 278 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RDNSNQ 400
GTG + + S + G + GG R N
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 401 TCYNCNKGSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 520
C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 372 NCFNCQQ-PGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 55.2 bits (127), Expect = 3e-08
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 15/135 (11%)
Frame = +2
Query: 104 VCYKCNRTGHFARECTQ--------GGVGARDAGF--NRQREKCFKCNRTGHFARDCKEE 253
VCY C + GH +R+C + G +GF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 254 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCN 418
+ + N G + Q E +C+NC + GH + +CPE ++ + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 419 KGSGHISRNCPDGTK 463
+ GH SR+CP+ K
Sbjct: 403 Q-PGHNSRDCPEERK 416
Score = 54.4 bits (125), Expect = 5e-08
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Frame = +2
Query: 221 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDN 391
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 392 SNQTCYNCNKGSGH-----------ISRNCPDGTKTCYVCGKPGHISRDCDE 514
+ + G G+ N G C+ C GH S +C E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Frame = +2
Query: 377 GGRDNS--NQTCYNCNKGSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 520
GG+D N C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 248 GGQDRGERNNNCFNCQQ-PGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 53.2 bits (122), Expect = 1e-07
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +2
Query: 326 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTK 463
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQ-PGHNSRDCPEERK 302
Score = 47.2 bits (107), Expect = 7e-06
Identities = 43/147 (29%), Positives = 62/147 (42%), Gaps = 26/147 (17%)
Frame = +2
Query: 158 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SP 316
G G +D G + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 246 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKP 303
Query: 317 DE--------PSCY---NCNKTGHIARNCPEGGRDNSNQTCY-------NCNK-GSGHIS 439
E S + N TG + G N+ ++ + N N GSG
Sbjct: 304 REGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGG 363
Query: 440 RNCPDGTKTCYVCGKPGHISRDCDEER 520
++ + C+ C +PGH S DC E +
Sbjct: 364 QDRGERNNNCFNCQQPGHRSNDCPEPK 390
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 221 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 376
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 30.7 bits (66), Expect = 0.67
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 422 GSGHISRNCPDGTKTCYVCGKPGHISRDCDEER 520
GSG ++ + C+ C +PGH S DC E +
Sbjct: 244 GSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPK 276
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 73.3 bits (172), Expect = 1e-13
Identities = 44/134 (32%), Positives = 56/134 (41%), Gaps = 17/134 (12%)
Frame = +2
Query: 158 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SP 316
G G G + CF C + GH + DC KE R CY C GH +REC + P
Sbjct: 145 GFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKP 204
Query: 317 DEPSC----------YNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTKT 466
E N G GG + C+NC KG GH S CP+ +
Sbjct: 205 REGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNC-KGEGHRSAECPEPPRG 263
Query: 467 CYVCGKPGHISRDC 508
C+ CG+ GH S +C
Sbjct: 264 CFNCGEQGHRSNEC 277
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Frame = +2
Query: 104 VCYKCNRTGHFARECTQ---------GGVGARDAGF-NRQREKCFKCNRTGHFARDCKEE 253
VCY C + GH +RECT+ GG G AGF N F G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGG-GAGFGNNGGNDGF--GGDGGFGGGEERG 240
Query: 254 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 373
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 241 PMKCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 51.2 bits (117), Expect = 4e-07
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Frame = +2
Query: 377 GGRDNSNQTCYNCNKGSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 520
GG N+N C+NC + GH S +CP+ K CY C +PGH SR+C EER
Sbjct: 153 GGERNNN--CFNCQQ-PGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 48.8 bits (111), Expect = 2e-06
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 17/136 (12%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 283
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 284 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRDNSNQTCYNC 415
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 416 NKGSGHISRNCPDGTK 463
+ GH S CP+ K
Sbjct: 268 GE-QGHRSNECPNPAK 282
Score = 31.5 bits (68), Expect = 0.38
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 416 NKGSGHISRNCPDGTKTCYVCGKPGHISRDCDEER 520
N G G + C+ C +PGH S DC E R
Sbjct: 143 NSGFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPR 177
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 73.3 bits (172), Expect = 1e-13
Identities = 44/134 (32%), Positives = 56/134 (41%), Gaps = 17/134 (12%)
Frame = +2
Query: 158 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SP 316
G G G + CF C + GH + DC KE R CY C GH +REC + P
Sbjct: 145 GFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKP 204
Query: 317 DEPSC----------YNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTKT 466
E N G GG + C+NC KG GH S CP+ +
Sbjct: 205 REGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNC-KGEGHRSAECPEPPRG 263
Query: 467 CYVCGKPGHISRDC 508
C+ CG+ GH S +C
Sbjct: 264 CFNCGEQGHRSNEC 277
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Frame = +2
Query: 104 VCYKCNRTGHFARECTQ---------GGVGARDAGF-NRQREKCFKCNRTGHFARDCKEE 253
VCY C + GH +RECT+ GG G AGF N F G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGG-GAGFGNNGGNDGF--GGDGGFGGGEERG 240
Query: 254 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 373
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 241 PMKCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 51.2 bits (117), Expect = 4e-07
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Frame = +2
Query: 377 GGRDNSNQTCYNCNKGSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 520
GG N+N C+NC + GH S +CP+ K CY C +PGH SR+C EER
Sbjct: 153 GGERNNN--CFNCQQ-PGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 48.8 bits (111), Expect = 2e-06
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 17/136 (12%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 283
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 284 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRDNSNQTCYNC 415
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 416 NKGSGHISRNCPDGTK 463
+ GH S CP+ K
Sbjct: 268 GE-QGHRSNECPNPAK 282
Score = 31.5 bits (68), Expect = 0.38
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 416 NKGSGHISRNCPDGTKTCYVCGKPGHISRDCDEER 520
N G G + C+ C +PGH S DC E R
Sbjct: 143 NSGFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPR 177
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 73.3 bits (172), Expect = 1e-13
Identities = 44/134 (32%), Positives = 56/134 (41%), Gaps = 17/134 (12%)
Frame = +2
Query: 158 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SP 316
G G G + CF C + GH + DC KE R CY C GH +REC + P
Sbjct: 145 GFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKP 204
Query: 317 DEPSC----------YNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTKT 466
E N G GG + C+NC KG GH S CP+ +
Sbjct: 205 REGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNC-KGEGHRSAECPEPPRG 263
Query: 467 CYVCGKPGHISRDC 508
C+ CG+ GH S +C
Sbjct: 264 CFNCGEQGHRSNEC 277
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Frame = +2
Query: 104 VCYKCNRTGHFARECTQ---------GGVGARDAGF-NRQREKCFKCNRTGHFARDCKEE 253
VCY C + GH +RECT+ GG G AGF N F G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGG-GAGFGNNGGNDGF--GGDGGFGGGEERG 240
Query: 254 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 373
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 241 PMKCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 51.2 bits (117), Expect = 4e-07
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Frame = +2
Query: 377 GGRDNSNQTCYNCNKGSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 520
GG N+N C+NC + GH S +CP+ K CY C +PGH SR+C EER
Sbjct: 153 GGERNNN--CFNCQQ-PGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 48.8 bits (111), Expect = 2e-06
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 17/136 (12%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 283
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 284 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRDNSNQTCYNC 415
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 416 NKGSGHISRNCPDGTK 463
+ GH S CP+ K
Sbjct: 268 GE-QGHRSNECPNPAK 282
Score = 31.5 bits (68), Expect = 0.38
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 416 NKGSGHISRNCPDGTKTCYVCGKPGHISRDCDEER 520
N G G + C+ C +PGH S DC E R
Sbjct: 143 NSGFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPR 177
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 66.5 bits (155), Expect = 1e-11
Identities = 41/125 (32%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 277
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 278 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRDNSNQTCYNCNKGSGHISRNC 448
GH A +C Q P P C NC + GH A++C E R + C C + GH C
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAE-EGHWGYEC 680
Query: 449 PDGTK 463
P K
Sbjct: 681 PTRPK 685
Score = 60.1 bits (139), Expect = 1e-09
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Frame = +2
Query: 215 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRD 388
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQPRVP 614
Query: 389 NSNQTCYNCNKGSGHISRNCPDGTKT----CYVCGKPGHISRDCDEER 520
C NC GH + +C D K C CG+ GH ++DC ER
Sbjct: 615 RG--PCRNCGI-EGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNER 658
Score = 56.8 bits (131), Expect = 9e-09
Identities = 35/102 (34%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC---KEEADRCYRCN 277
C C + GHFA +C Q V R C C GHFA DC K C C
Sbjct: 595 CRNCEQLGHFASDCDQPRV---------PRGPCRNCGIEGHFAVDCDQPKVPRGPCRNCG 645
Query: 278 GTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPEGGRD 388
GH A++C P EP C C + GH CP +D
Sbjct: 646 QEGHFAKDCQNERVRMEPTEP-CRRCAEEGHWGYECPTRPKD 686
Score = 32.7 bits (71), Expect = 0.17
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +2
Query: 89 KMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC 244
K+ C C + GHFA++C V E C +C GH+ +C
Sbjct: 635 KVPRGPCRNCGQEGHFAKDCQNERVRMEPT------EPCRRCAEEGHWGYEC 680
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 66.5 bits (155), Expect = 1e-11
Identities = 41/125 (32%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 277
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 278 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRDNSNQTCYNCNKGSGHISRNC 448
GH A +C Q P P C NC + GH A++C E R + C C + GH C
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAE-EGHWGYEC 680
Query: 449 PDGTK 463
P K
Sbjct: 681 PTRPK 685
Score = 60.1 bits (139), Expect = 1e-09
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Frame = +2
Query: 215 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRD 388
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQPRVP 614
Query: 389 NSNQTCYNCNKGSGHISRNCPDGTKT----CYVCGKPGHISRDCDEER 520
C NC GH + +C D K C CG+ GH ++DC ER
Sbjct: 615 RG--PCRNCGI-EGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNER 658
Score = 56.8 bits (131), Expect = 9e-09
Identities = 35/102 (34%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC---KEEADRCYRCN 277
C C + GHFA +C Q V R C C GHFA DC K C C
Sbjct: 595 CRNCEQLGHFASDCDQPRV---------PRGPCRNCGIEGHFAVDCDQPKVPRGPCRNCG 645
Query: 278 GTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPEGGRD 388
GH A++C P EP C C + GH CP +D
Sbjct: 646 QEGHFAKDCQNERVRMEPTEP-CRRCAEEGHWGYECPTRPKD 686
Score = 32.7 bits (71), Expect = 0.17
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +2
Query: 89 KMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC 244
K+ C C + GHFA++C V E C +C GH+ +C
Sbjct: 635 KVPRGPCRNCGQEGHFAKDCQNERVRMEPT------EPCRRCAEEGHWGYEC 680
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 61.7 bits (143), Expect = 3e-10
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Frame = +2
Query: 89 KMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADR-- 262
K++ S C+ C GH +C + + D CFKC H +CK++ +
Sbjct: 225 KITGSACFHCREPGHRLADCPKRNSSSSDG-------VCFKCGSMEHSIHECKKKGVKGF 277
Query: 263 ----CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPE 376
C+ C GHI+R+C Q+ PD C C H+ R+CPE
Sbjct: 278 PYATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPE 324
Score = 59.7 bits (138), Expect = 1e-09
Identities = 43/132 (32%), Positives = 56/132 (42%), Gaps = 12/132 (9%)
Frame = +2
Query: 155 GGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQ---SPDEP 325
G V DA +R K + R G +D K C+ C GH +C + S +
Sbjct: 197 GKVTVADAMLLVKRWKTRETRRIGR--QDQKITGSACFHCREPGHRLADCPKRNSSSSDG 254
Query: 326 SCYNCNKTGHIARNCPEGG-RDNSNQTCYNCNKGSGHISRNC--------PDGTKTCYVC 478
C+ C H C + G + TC+ C K GHISR+C PDG C VC
Sbjct: 255 VCFKCGSMEHSIHECKKKGVKGFPYATCFVC-KQVGHISRDCHQNVNGVYPDGG-CCNVC 312
Query: 479 GKPGHISRDCDE 514
G H+ RDC E
Sbjct: 313 GANTHLRRDCPE 324
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = +2
Query: 326 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTK-----TCYVCGKPG 490
+C++C + GH +CP+ +S+ C+ C I G K TC+VC + G
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVG 289
Query: 491 HISRDCDEERN 523
HISRDC + N
Sbjct: 290 HISRDCHQNVN 300
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 371 PEGGRDNSNQTCYNCNKGSGHISRNCPD---GTKTCYVCGKPGHISRDCDEER 520
P G + + C+ C K + H +++CP+ K CY CG H+S C E R
Sbjct: 102 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERR 154
Score = 35.1 bits (77), Expect = 0.031
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 260 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 385
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 155
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +2
Query: 152 QGGVGARDAGFNRQRE---KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 310
QG G+R R++ +CF+C + H A+ C K +A CY C H++ C +
Sbjct: 93 QGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 371 PEGGRDNSNQTCYNCNKGSGHISRNCPD---GTKTCYVCGKPGHISRDCDEER 520
P G + + C+ C K + H +++CP+ K CY CG H+S C E R
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERR 185
Score = 35.1 bits (77), Expect = 0.031
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 260 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 385
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +2
Query: 152 QGGVGARDAGFNRQRE---KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 310
QG G+R R++ +CF+C + H A+ C K +A CY C H++ C +
Sbjct: 124 QGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 371 PEGGRDNSNQTCYNCNKGSGHISRNCPD---GTKTCYVCGKPGHISRDCDEER 520
P G + + C+ C K + H +++CP+ K CY CG H+S C E R
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERR 185
Score = 35.1 bits (77), Expect = 0.031
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 260 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 385
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +2
Query: 152 QGGVGARDAGFNRQRE---KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 310
QG G+R R++ +CF+C + H A+ C K +A CY C H++ C +
Sbjct: 124 QGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 371 PEGGRDNSNQTCYNCNKGSGHISRNCPD---GTKTCYVCGKPGHISRDCDEER 520
P G + + C+ C K + H +++CP+ K CY CG H+S C E R
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERR 185
Score = 35.1 bits (77), Expect = 0.031
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 260 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 385
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +2
Query: 152 QGGVGARDAGFNRQRE---KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 310
QG G+R R++ +CF+C + H A+ C K +A CY C H++ C +
Sbjct: 124 QGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +2
Query: 308 QSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTKTCYVCGKP 487
Q+P + C +C + G C + +DN++Q C C + H++ + C+ C +
Sbjct: 625 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 683
Query: 488 GHISRDCDEE 517
GHI+ +C ++
Sbjct: 684 GHIAWNCPKK 693
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +2
Query: 197 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 361
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 629 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 687
Query: 362 RNCPEGGRDNSNQ 400
NCP+ + S +
Sbjct: 688 WNCPKKNENTSEK 700
Score = 31.1 bits (67), Expect = 0.50
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 143 ECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 253
EC Q G F + CF+CN GH A +C ++
Sbjct: 658 ECQQSGWHMASC-FKLKNRACFRCNEMGHIAWNCPKK 693
Score = 27.9 bits (59), Expect = 4.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 89 KMSSSVCYKCNRTGHFAREC 148
K+ + C++CN GH A C
Sbjct: 671 KLKNRACFRCNEMGHIAWNC 690
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +2
Query: 308 QSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTKTCYVCGKP 487
Q+P + C +C + G C + +DN++Q C C + H++ + C+ C +
Sbjct: 528 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 586
Query: 488 GHISRDCDEE 517
GHI+ +C ++
Sbjct: 587 GHIAWNCPKK 596
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +2
Query: 197 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 361
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 532 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 590
Query: 362 RNCPEGGRDNSNQ 400
NCP+ + S +
Sbjct: 591 WNCPKKNENTSEK 603
Score = 31.1 bits (67), Expect = 0.50
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 143 ECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 253
EC Q G F + CF+CN GH A +C ++
Sbjct: 561 ECQQSGWHMASC-FKLKNRACFRCNEMGHIAWNCPKK 596
Score = 27.9 bits (59), Expect = 4.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 89 KMSSSVCYKCNRTGHFAREC 148
K+ + C++CN GH A C
Sbjct: 574 KLKNRACFRCNEMGHIAWNC 593
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +2
Query: 308 QSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTKTCYVCGKP 487
Q+P + C +C + G C + +DN++Q C C + H++ + C+ C +
Sbjct: 539 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 597
Query: 488 GHISRDCDEE 517
GHI+ +C ++
Sbjct: 598 GHIAWNCPKK 607
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +2
Query: 197 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 361
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 543 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 601
Query: 362 RNCPEGGRDNSNQ 400
NCP+ + S +
Sbjct: 602 WNCPKKNENTSEK 614
Score = 31.1 bits (67), Expect = 0.50
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 143 ECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 253
EC Q G F + CF+CN GH A +C ++
Sbjct: 572 ECQQSGWHMASC-FKLKNRACFRCNEMGHIAWNCPKK 607
Score = 27.9 bits (59), Expect = 4.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 89 KMSSSVCYKCNRTGHFAREC 148
K+ + C++CN GH A C
Sbjct: 585 KLKNRACFRCNEMGHIAWNC 604
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 42.7 bits (96), Expect = 2e-04
Identities = 32/111 (28%), Positives = 42/111 (37%), Gaps = 5/111 (4%)
Frame = +2
Query: 140 RECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 319
R C Q +G GF K C+ G DC +++ +C C G R+C Q
Sbjct: 825 RRCDQCAIGTY--GFGPSGCKKCDCDAVGSLGNDCDKQSGQCV-CREKGIYGRQCNQCQP 881
Query: 320 E----PSCYNCNKTGHIARNCPEGGRDNSNQTCYNC-NKGSGHISRNCPDG 457
P C C H A C D S+ C C + +GH C DG
Sbjct: 882 GFWGFPECRTCQCNDH-ANIC-----DQSSGACIECRDLTTGHYCDRCQDG 926
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 326 SCYNCNKTGHIARNCPE-GGRDNSNQTCYN-CNKGSGHISRNCPDGTKTCYVCGKPGHIS 499
+C+NC++ GH A CP G+ NQ ++ + +N D TCY CG+ GH +
Sbjct: 205 TCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSD--VTCYKCGEKGHYA 262
Query: 500 RDC 508
C
Sbjct: 263 NRC 265
Score = 34.3 bits (75), Expect = 0.054
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = +2
Query: 203 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARN 367
C C+ GH A C + R N H + + PD+ + CY C + GH A
Sbjct: 206 CHNCHERGHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 368 CPEG 379
C +G
Sbjct: 265 CHKG 268
Score = 31.9 bits (69), Expect = 0.29
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 92 MSSSVCYKCNRTGHFARECTQGGV 163
+S CYKC GH+A C +G +
Sbjct: 247 LSDVTCYKCGEKGHYANRCHKGAL 270
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 203 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARE 301
C+KC GH+A C + A + N T H+A E
Sbjct: 252 CYKCGEKGHYANRCHKGA-LAFLSN-TAHLAHE 282
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 203 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 307
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 37.1 bits (82), Expect = 0.008
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 395 NQTCYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
+ TC+NC K GH + C + C CG P H + +C
Sbjct: 201 SNTCFNCKK-YGHRATECSAPQRECANCGDPNHRANEC 237
Score = 33.5 bits (73), Expect = 0.095
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 254 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 370
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 326 SCYNCNKTGHIARNCPEGGRD--NSNQTCYNCNKGSGHISRNCPDGTKTCYV 475
+C+NC K GH A C R+ N + N+ + + TK YV
Sbjct: 203 TCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEPTKVTYV 254
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 98 SSVCYKCNRTGHFARECTQGGVGARDAGF-NRQREKCFKCNRTG 226
S+ C+ C + GH A EC+ + G N + +C ++ G
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNG 244
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 203 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 307
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 37.1 bits (82), Expect = 0.008
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 395 NQTCYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
+ TC+NC K GH + C + C CG P H + +C
Sbjct: 201 SNTCFNCKK-YGHRATECSAPQRECANCGDPNHRANEC 237
Score = 33.5 bits (73), Expect = 0.095
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 254 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 370
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 326 SCYNCNKTGHIARNCPEGGRD--NSNQTCYNCNKGSGHISRNCPDGTKTCYV 475
+C+NC K GH A C R+ N + N+ + + TK YV
Sbjct: 203 TCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEPTKVTYV 254
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 98 SSVCYKCNRTGHFARECTQGGVGARDAGF-NRQREKCFKCNRTG 226
S+ C+ C + GH A EC+ + G N + +C ++ G
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNG 244
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 37.1 bits (82), Expect = 0.008
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 326 SCYNCNKTGHIARNCPEGGRDNSNQ 400
+CY C + GHI+RNCP G D +
Sbjct: 5 NCYKCQQPGHISRNCPNGESDGGRR 29
Score = 34.7 bits (76), Expect = 0.041
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 392 SNQTCYNCNKGSGHISRNCPDG 457
S++ CY C + GHISRNCP+G
Sbjct: 2 SDRNCYKCQQ-PGHISRNCPNG 22
Score = 32.3 bits (70), Expect = 0.22
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 92 MSSSVCYKCNRTGHFARECTQG-GVGARDAG 181
MS CYKC + GH +R C G G R G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRGG 31
Score = 31.5 bits (68), Expect = 0.38
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 461 KTCYVCGKPGHISRDC 508
+ CY C +PGHISR+C
Sbjct: 4 RNCYKCQQPGHISRNC 19
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 203 CFKCNRTGHFARDCKE-EADRCYRCNGTGHI 292
C+KC + GH +R+C E+D R G G +
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 254 ADR-CYRCNGTGHIAREC 304
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 35.9 bits (79), Expect = 0.018
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 224 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 379
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 34.3 bits (75), Expect = 0.054
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 329 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNC 448
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCG-AFGHISKDC 468
Score = 32.7 bits (71), Expect = 0.17
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Frame = +2
Query: 404 CYNCNKGSGHISRNCPDGTKT-----CYVCGKPGHISRDC 508
C NC H S CPD C CG GHIS+DC
Sbjct: 430 CSNCGSDE-HKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCK 247
C C H + EC DA + KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECP-------DAPNVTNQIKCTNCGAFGHISKDCK 469
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 35.9 bits (79), Expect = 0.018
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 224 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 379
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 34.3 bits (75), Expect = 0.054
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 329 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNC 448
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCG-AFGHISKDC 468
Score = 32.7 bits (71), Expect = 0.17
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Frame = +2
Query: 404 CYNCNKGSGHISRNCPDGTKT-----CYVCGKPGHISRDC 508
C NC H S CPD C CG GHIS+DC
Sbjct: 430 CSNCGSDE-HKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCK 247
C C H + EC DA + KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECP-------DAPNVTNQIKCTNCGAFGHISKDCK 469
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 33.5 bits (73), Expect = 0.095
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 4/138 (2%)
Frame = +2
Query: 116 CNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRC-YRCNGTGHI 292
C++ G + C + DA ++Q KC T + D K + + + C T
Sbjct: 590 CSK-GKYGESC-ELSCPCSDASCSKQTGKCLCPLGTKGVSCDQKCDPNTFGFLCQETVTP 647
Query: 293 ARECAQSPDEPSCYNC--NKTG-HIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTK 463
+ + P C +C +G H NCP G + Q +C G G C T
Sbjct: 648 SPCASTDPKNGVCLSCPPGSSGIHCEHNCPAGSYGDGCQQVCSCADGHG-----CDPTTG 702
Query: 464 TCYVCGKPGHISRDCDEE 517
C +C +PG+ + C E+
Sbjct: 703 EC-IC-EPGYHGKTCSEK 718
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 33.5 bits (73), Expect = 0.095
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 4/138 (2%)
Frame = +2
Query: 116 CNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRC-YRCNGTGHI 292
C++ G + C + DA ++Q KC T + D K + + + C T
Sbjct: 590 CSK-GKYGESC-ELSCPCSDASCSKQTGKCLCPLGTKGVSCDQKCDPNTFGFLCQETVTP 647
Query: 293 ARECAQSPDEPSCYNC--NKTG-HIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTK 463
+ + P C +C +G H NCP G + Q +C G G C T
Sbjct: 648 SPCASTDPKNGVCLSCPPGSSGIHCEHNCPAGSYGDGCQQVCSCADGHG-----CDPTTG 702
Query: 464 TCYVCGKPGHISRDCDEE 517
C +C +PG+ + C E+
Sbjct: 703 EC-IC-EPGYHGKTCSEK 718
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 33.5 bits (73), Expect = 0.095
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 4/138 (2%)
Frame = +2
Query: 116 CNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRC-YRCNGTGHI 292
C++ G + C + DA ++Q KC T + D K + + + C T
Sbjct: 590 CSK-GKYGESC-ELSCPCSDASCSKQTGKCLCPLGTKGVSCDQKCDPNTFGFLCQETVTP 647
Query: 293 ARECAQSPDEPSCYNC--NKTG-HIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTK 463
+ + P C +C +G H NCP G + Q +C G G C T
Sbjct: 648 SPCASTDPKNGVCLSCPPGSSGIHCEHNCPAGSYGDGCQQVCSCADGHG-----CDPTTG 702
Query: 464 TCYVCGKPGHISRDCDEE 517
C +C +PG+ + C E+
Sbjct: 703 EC-IC-EPGYHGKTCSEK 718
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 33.5 bits (73), Expect = 0.095
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 4/138 (2%)
Frame = +2
Query: 116 CNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRC-YRCNGTGHI 292
C++ G + C + DA ++Q KC T + D K + + + C T
Sbjct: 590 CSK-GKYGESC-ELSCPCSDASCSKQTGKCLCPLGTKGVSCDQKCDPNTFGFLCQETVTP 647
Query: 293 ARECAQSPDEPSCYNC--NKTG-HIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTK 463
+ + P C +C +G H NCP G + Q +C G G C T
Sbjct: 648 SPCASTDPKNGVCLSCPPGSSGIHCEHNCPAGSYGDGCQQVCSCADGHG-----CDPTTG 702
Query: 464 TCYVCGKPGHISRDCDEE 517
C +C +PG+ + C E+
Sbjct: 703 EC-IC-EPGYHGKTCSEK 718
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 263 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGG 382
CY+C GH++++C QS N KT H N E G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVG 351
Score = 31.5 bits (68), Expect = 0.38
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +2
Query: 323 PSCYNCNKTGHIARNCPEGGRDN 391
P CY C GH++++CP+ ++
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 27.9 bits (59), Expect = 4.7
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGA 169
CYKC GH +++C Q +
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNS 333
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 32.7 bits (71), Expect = 0.17
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +2
Query: 248 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGS 427
E + C C+GT + + D SC++C ++GH +C N NQ K S
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH--PSCL-----NFNQNVTKIIKRS 304
Query: 428 GHISRNCPDGTKTCYVCG 481
G C K+C +CG
Sbjct: 305 GWQCLEC----KSCTICG 318
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 32.7 bits (71), Expect = 0.17
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = +2
Query: 101 SVCYKCNRTGHFARECTQGGVGARDAGFNRQRE--KCFKCNRTGHFARDCKEEADRCYRC 274
S C C+ T H R +A + RE CF C R+GH C C C
Sbjct: 312 SPCIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKCSRPR-TCNHC 370
Query: 275 NGTGH 289
G H
Sbjct: 371 KGNHH 375
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVG--ARDAGFNRQREKCFKCNRTGHFARDCKEEADR 262
C++C+R GHF C Q + AR + ++ N +G ++ +E DR
Sbjct: 1357 CHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEGGDR 1410
Score = 31.5 bits (68), Expect = 0.38
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 290 IARECAQ--SPDEPSCYNCNKTGHIARNCPE 376
+ R+C Q +P + C+ C++ GH +CP+
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQ 1372
Score = 31.5 bits (68), Expect = 0.38
Identities = 26/81 (32%), Positives = 34/81 (41%)
Frame = +2
Query: 140 RECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 319
R+C QG A +RQ C +C+R GHF C + A AR+ S
Sbjct: 1344 RKCNQGS-----APTDRQ---CHQCHRIGHFVESCPQRA--------LAKEARKRFGSNS 1387
Query: 320 EPSCYNCNKTGHIARNCPEGG 382
S Y N +G +N EGG
Sbjct: 1388 TNSSYRSNDSGRGFKNGEEGG 1408
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 32.3 bits (70), Expect = 0.22
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 263 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISR 442
C +C+GT + + SC CN TG +++ +GG TC C +GSGH ++
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRC-RGSGHYNK 242
Query: 443 N 445
N
Sbjct: 243 N 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 32.3 bits (70), Expect = 0.22
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 263 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISR 442
C +C+GT + + SC CN TG +++ +GG TC C +GSGH ++
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRC-RGSGHYNK 242
Query: 443 N 445
N
Sbjct: 243 N 243
>AL110485-23|CAB60377.3| 770|Caenorhabditis elegans Hypothetical
protein Y46G5A.29 protein.
Length = 770
Score = 31.9 bits (69), Expect = 0.29
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Frame = +2
Query: 302 CAQSPDEPSCYNCNKTGHIARNCPEGGR--DN---SNQTCYNCNKGSGHISRNCPDGT-- 460
C+ S + +C CN G++ NC E + DN +N TC+N + S C +GT
Sbjct: 381 CSMSKGKSTC-QCNP-GYVGANCTEIDKCLDNECDNNSTCFNDKRSPVGYSCKCQNGTVG 438
Query: 461 KTCYV-CGK 484
K C + C K
Sbjct: 439 KLCEIECPK 447
Score = 29.1 bits (62), Expect = 2.0
Identities = 24/97 (24%), Positives = 34/97 (35%), Gaps = 1/97 (1%)
Frame = +2
Query: 236 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRDNSNQTCYN 412
+D E +CY N G I +C C N+ G +C G + Y
Sbjct: 447 KDQCENGGQCY-LNTFGKIGCKCVPGTTGRRCEREINECGW--NSCKNGAKCVDLFNDYR 503
Query: 413 CNKGSGHISRNCPDGTKTCYVCGKPGHISRDCDEERN 523
C+ G + RNC + Y + C E RN
Sbjct: 504 CDCADGWMGRNCERPCQDIYGSCRVWKREGQCQEMRN 540
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 31.9 bits (69), Expect = 0.29
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 368 CPEGGRDNSNQTCYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
CP +D+ QTC G+ + R C + + C +C P HI+ +C
Sbjct: 925 CPPCKKDHPLQTC---TMGAIEVKRFCINNGR-CTICSSPSHITGNC 967
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 31.1 bits (67), Expect = 0.50
Identities = 41/149 (27%), Positives = 57/149 (38%), Gaps = 23/149 (15%)
Frame = +2
Query: 98 SSVCYKC--NRTGHFARECTQGGVG-ARDAGFNRQREKCFKCNRTGHFARDCKE-EADRC 265
+SVC C N G F C G +G AR+ G N KC F+ C + R
Sbjct: 1553 TSVCTDCEHNTFGDFCEHCLPGYIGDAREGGANACT-KCACPLVENSFSDSCVAVDHGRG 1611
Query: 266 YRCNG-----TGHIAREC-AQSPDEP-------SCYNCNKTGHIARNC-PEGGRDN---- 391
Y CN TG C A +P S +C+ G + C P G+
Sbjct: 1612 YVCNSCKPGYTGQYCETCVAGYYGDPQHIGGTCSPCDCHPDGSLHGACNPLSGQCECKPG 1671
Query: 392 -SNQTCYNCNKGSGHISRNCPDGTKTCYV 475
+ +TC C + I+R C + CY+
Sbjct: 1672 VTGRTCSMCQERHAFINRVCTSCDQGCYL 1700
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 31.1 bits (67), Expect = 0.50
Identities = 41/149 (27%), Positives = 57/149 (38%), Gaps = 23/149 (15%)
Frame = +2
Query: 98 SSVCYKC--NRTGHFARECTQGGVG-ARDAGFNRQREKCFKCNRTGHFARDCKE-EADRC 265
+SVC C N G F C G +G AR+ G N KC F+ C + R
Sbjct: 1553 TSVCTDCEHNTFGDFCEHCLPGYIGDAREGGANACT-KCACPLVENSFSDSCVAVDHGRG 1611
Query: 266 YRCNG-----TGHIAREC-AQSPDEP-------SCYNCNKTGHIARNC-PEGGRDN---- 391
Y CN TG C A +P S +C+ G + C P G+
Sbjct: 1612 YVCNSCKPGYTGQYCETCVAGYYGDPQHIGGTCSPCDCHPDGSLHGACNPLSGQCECKPG 1671
Query: 392 -SNQTCYNCNKGSGHISRNCPDGTKTCYV 475
+ +TC C + I+R C + CY+
Sbjct: 1672 VTGRTCSMCQERHAFINRVCTSCDQGCYL 1700
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 31.1 bits (67), Expect = 0.50
Identities = 41/149 (27%), Positives = 57/149 (38%), Gaps = 23/149 (15%)
Frame = +2
Query: 98 SSVCYKC--NRTGHFARECTQGGVG-ARDAGFNRQREKCFKCNRTGHFARDCKE-EADRC 265
+SVC C N G F C G +G AR+ G N KC F+ C + R
Sbjct: 1553 TSVCTDCEHNTFGDFCEHCLPGYIGDAREGGANACT-KCACPLVENSFSDSCVAVDHGRG 1611
Query: 266 YRCNG-----TGHIAREC-AQSPDEP-------SCYNCNKTGHIARNC-PEGGRDN---- 391
Y CN TG C A +P S +C+ G + C P G+
Sbjct: 1612 YVCNSCKPGYTGQYCETCVAGYYGDPQHIGGTCSPCDCHPDGSLHGACNPLSGQCECKPG 1671
Query: 392 -SNQTCYNCNKGSGHISRNCPDGTKTCYV 475
+ +TC C + I+R C + CY+
Sbjct: 1672 VTGRTCSMCQERHAFINRVCTSCDQGCYL 1700
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 30.7 bits (66), Expect = 0.67
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +2
Query: 263 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISR 442
C T +CA + DE Y CN R+CPE +N+ C + K HI
Sbjct: 2805 CILLGATCDSKPDCADASDENPNY-CN-----TRSCPEDYNLCTNRRCIDSAKKCNHID- 2857
Query: 443 NCPDGT 460
+C DG+
Sbjct: 2858 DCGDGS 2863
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 30.7 bits (66), Expect = 0.67
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +2
Query: 263 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISR 442
C T +CA + DE Y CN R+CPE +N+ C + K HI
Sbjct: 2805 CILLGATCDSKPDCADASDENPNY-CN-----TRSCPEDYNLCTNRRCIDSAKKCNHID- 2857
Query: 443 NCPDGT 460
+C DG+
Sbjct: 2858 DCGDGS 2863
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 30.3 bits (65), Expect = 0.88
Identities = 18/77 (23%), Positives = 30/77 (38%)
Frame = +2
Query: 197 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 376
E C NR+G + D + D C + + D C C K+ H++ + +
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHLSCDSSD 114
Query: 377 GGRDNSNQTCYNCNKGS 427
N N C +C + S
Sbjct: 115 VSSLN-NFVCISCRRRS 130
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 30.3 bits (65), Expect = 0.88
Identities = 18/77 (23%), Positives = 30/77 (38%)
Frame = +2
Query: 197 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 376
E C NR+G + D + D C + + D C C K+ H++ + +
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHLSCDSSD 114
Query: 377 GGRDNSNQTCYNCNKGS 427
N N C +C + S
Sbjct: 115 VSSLN-NFVCISCRRRS 130
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 30.3 bits (65), Expect = 0.88
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 10/74 (13%)
Frame = +2
Query: 269 RCNGTGHIARECAQSPDEPSCYNCNKTGH-IARNCPEGGR---------DNSNQTCYNCN 418
+C+G +C DE +C C K H +NC + + D S++ +C
Sbjct: 235 KCDGVS----DCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIPDCDDGSDEHQCDCK 290
Query: 419 KGSGHISRNCPDGT 460
SG C DGT
Sbjct: 291 TCSGSEKALCEDGT 304
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 374 EGGRDNSNQTCYNCNKGSGHISRNCPDGTKTC 469
E D SN C C KG+ +NC +K C
Sbjct: 243 ENESDESN--CNKCQKGAHKCGKNCIKASKVC 272
>Z54281-2|CAA91045.3| 399|Caenorhabditis elegans Hypothetical
protein F46C5.3 protein.
Length = 399
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +2
Query: 329 CYN-CNKTGHIARNCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTKTC 469
CY+ C G +A NC GG N N C CN G+ C + C
Sbjct: 236 CYDSCRNAGQLA-NCANGGIPNPN-NCQVCNCPMGYGGDLCDQRPEGC 281
>U28741-4|AAA68328.1| 747|Caenorhabditis elegans Hypothetical
protein F35D2.4 protein.
Length = 747
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 368 CPEGGRDNSNQT-CYNCNKGSGH 433
CPEG + +QT C NCN G+ H
Sbjct: 55 CPEGTLSSPDQTGCLNCNNGTCH 77
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = +2
Query: 98 SSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADR 262
+ +C +C + G C+ + + R +CF C GH + C + DR
Sbjct: 578 NGICAECKQVGGHEPSCS---LAPKTWKRERPPPQCFTCGEMGHISTYCPKRIDR 629
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +2
Query: 263 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 376
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 9/47 (19%)
Frame = +2
Query: 395 NQTCYNCNKGSGHISRNCPDGTKT---------CYVCGKPGHISRDC 508
N C C + GH +C KT C+ CG+ GHIS C
Sbjct: 578 NGICAECKQVGGH-EPSCSLAPKTWKRERPPPQCFTCGEMGHISTYC 623
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +2
Query: 356 IARNCPEG---GRDNSNQTCYNCNK--GSGHISRNCPDGTKTCY 472
++ CP G +D C+ G+G +S CPDG TCY
Sbjct: 682 LSEACPPGTVVAKDGDGSRLVQCSNPGGNGRVSGGCPDG-YTCY 724
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +2
Query: 233 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 376
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 404 CYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
C C G+ H+S P+G C+ G +S DC
Sbjct: 411 CDQCKPGAFHLSEKSPEGCLKCFCFG----VSNDC 441
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 404 CYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
C C G+ H+S P+G C+ G +S DC
Sbjct: 411 CDQCKPGAFHLSEKSPEGCLKCFCFG----VSNDC 441
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 404 CYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
C C G+ H+S P+G C+ G +S DC
Sbjct: 411 CDQCKPGAFHLSEKSPEGCLKCFCFG----VSNDC 441
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 404 CYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
C C G+ H+S P+G C+ G +S DC
Sbjct: 411 CDQCKPGAFHLSEKSPEGCLKCFCFG----VSNDC 441
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 404 CYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
C C G+ H+S P+G C+ G +S DC
Sbjct: 411 CDQCKPGAFHLSEKSPEGCLKCFCFG----VSNDC 441
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 404 CYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
C C G+ H+S P+G C+ G +S DC
Sbjct: 411 CDQCKPGAFHLSEKSPEGCLKCFCFG----VSNDC 441
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 404 CYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
C C G+ H+S P+G C+ G +S DC
Sbjct: 411 CDQCKPGAFHLSEKSPEGCLKCFCFG----VSNDC 441
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 404 CYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
C C G+ H+S P+G C+ G +S DC
Sbjct: 411 CDQCKPGAFHLSEKSPEGCLKCFCFG----VSNDC 441
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 404 CYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
C C G+ H+S P+G C+ G +S DC
Sbjct: 411 CDQCKPGAFHLSEKSPEGCLKCFCFG----VSNDC 441
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Frame = +2
Query: 368 CPEGGRDNSNQTCYNCNKG-----SGHIS-RNCPDGTKT 466
CP G N N TC C +G SG S + CPDGT T
Sbjct: 1509 CPSGSV-NINNTCMLCPRGSYQDESGETSCKPCPDGTYT 1546
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 404 CYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
C C G+ H+S P+G C+ G +S DC
Sbjct: 411 CDQCKPGAFHLSEKSPEGCLKCFCFG----VSNDC 441
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 188 RQREKCFKCNRTGHFARDCKEEA 256
R + +C C GH AR+CK++A
Sbjct: 571 RFKGQCHYCKNVGHMARNCKKKA 593
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKC 214
C+ C GH AR C + + G+ Q C
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSC 611
Score = 27.1 bits (57), Expect = 8.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 329 CYNCNKTGHIARNC 370
C+ C GH+ARNC
Sbjct: 576 CHYCKNVGHMARNC 589
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = +2
Query: 269 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE----GGRDNSNQTCYNCNKGSGHI 436
+ N T + R+ + + C C+K+ HI P R+N C+ CN+ S
Sbjct: 524 KMNYTCVVCRKSTEQHKQTQCDECHKSYHIGCLSPPLTRLPKRNNFGWICHECNESSDSE 583
Query: 437 SRNCPDGTKT 466
P+ +++
Sbjct: 584 QEIIPEASES 593
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 389 NSNQTCYNCNKGSGHISRNCPDGTKTCYVCGKPGHI 496
N+N +C G G ++ +CP C + K HI
Sbjct: 16 NANMSCLVMRPGYGLVTEDCPTHAVGCRIRAKKDHI 51
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 28.3 bits (60), Expect = 3.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 329 CYNCNKTGHIARNCPE 376
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 28.3 bits (60), Expect = 3.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 467 CYVCGKPGHISRDCDEERN 523
CY CGK GH + +C +++
Sbjct: 411 CYYCGKRGHTANECRRKKS 429
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +2
Query: 107 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN-GT 283
CY C + GH A EC + D N +R+ + + R + D Y + T
Sbjct: 411 CYYCGKRGHTANECRR---KKSDESQNGERQDPSQSEQIAALRRQLAMQNDDPYSSDEST 467
Query: 284 GHIARECAQSPDEPS 328
++ C + ++P+
Sbjct: 468 EALSLSCQKPKEDPT 482
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 326 SCYNCNKTGHIARNCPEGGRDNS 394
+CY C K GH A C D S
Sbjct: 410 NCYYCGKRGHTANECRRKKSDES 432
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 449 PD-GTKTCYVCGKPGHISRDCDEER 520
PD GT CY C + H ++ CDE R
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 449 PD-GTKTCYVCGKPGHISRDCDEER 520
PD GT CY C + H ++ CDE R
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 449 PD-GTKTCYVCGKPGHISRDCDEER 520
PD GT CY C + H ++ CDE R
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 404 CYNCNKGSGHISRNCPDGTKTCYVC 478
C NCNK + PD TK C +C
Sbjct: 302 CQNCNKALKYYDP-IPDDTKLCLIC 325
>U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform a protein.
Length = 95
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Frame = +2
Query: 191 QREKCFKCNRTGHFARDCKEEADR----CYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 358
+ KC KC ++ + A + + C++CN + C +P E Y C K H
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCNMCNKLLDSCTVAPHEAELY-C-KQCHG 64
Query: 359 ARNCPEGGRDNSNQTCYNCNKG 424
+ P+G C + G
Sbjct: 65 RKFGPKGVGFGLGAGCLTTDSG 86
>U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform b protein.
Length = 113
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Frame = +2
Query: 191 QREKCFKCNRTGHFARDCKEEADR----CYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 358
+ KC KC ++ + A + + C++CN + C +P E Y C K H
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCNMCNKLLDSCTVAPHEAELY-C-KQCHG 64
Query: 359 ARNCPEGGRDNSNQTCYNCNKG 424
+ P+G C + G
Sbjct: 65 RKFGPKGVGFGLGAGCLTTDSG 86
>U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcription
factor) homologprotein 1 protein.
Length = 759
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 398 QTCYNCNKGSGHISRNCPDGTKTCYVCG 481
+TC NC GS I + G TC CG
Sbjct: 3 RTCSNC--GSSEIDEDAARGDATCTACG 28
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 404 CYNCNKGSGHISRNCPDGTKTCYVC 478
C NCNK + PD TK C +C
Sbjct: 281 CQNCNKALKYYDP-IPDDTKLCLIC 304
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 27.1 bits (57), Expect = 8.2
Identities = 26/108 (24%), Positives = 37/108 (34%), Gaps = 6/108 (5%)
Frame = +2
Query: 203 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARE------CAQSPDEPSCYNCNKTGHIAR 364
C KC + G+F DCK C G + + C + C C+ +
Sbjct: 549 CDKC-QVGYFGDDCK--FCNCDPMGTEGGVCDQTTGQCLCKEGFAGDKCDRCDIAFYGYP 605
Query: 365 NCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
NC D + T C+ SG N +TC C + DC
Sbjct: 606 NCKACACDGAGITSPECDATSGQCPCNGNFTGRTCDKCAAGFYNYPDC 653
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 27.1 bits (57), Expect = 8.2
Identities = 26/108 (24%), Positives = 37/108 (34%), Gaps = 6/108 (5%)
Frame = +2
Query: 203 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARE------CAQSPDEPSCYNCNKTGHIAR 364
C KC + G+F DCK C G + + C + C C+ +
Sbjct: 549 CDKC-QVGYFGDDCK--FCNCDPMGTEGGVCDQTTGQCLCKEGFAGDKCDRCDIAFYGYP 605
Query: 365 NCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
NC D + T C+ SG N +TC C + DC
Sbjct: 606 NCKACACDGAGITSPECDATSGQCPCNGNFTGRTCDKCAAGFYNYPDC 653
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.1 bits (57), Expect = 8.2
Identities = 26/108 (24%), Positives = 37/108 (34%), Gaps = 6/108 (5%)
Frame = +2
Query: 203 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARE------CAQSPDEPSCYNCNKTGHIAR 364
C KC + G+F DCK C G + + C + C C+ +
Sbjct: 549 CDKC-QVGYFGDDCK--FCNCDPMGTEGGVCDQTTGQCLCKEGFAGDKCDRCDIAFYGYP 605
Query: 365 NCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
NC D + T C+ SG N +TC C + DC
Sbjct: 606 NCKACACDGAGITSPECDATSGQCPCNGNFTGRTCDKCAAGFYNYPDC 653
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.1 bits (57), Expect = 8.2
Identities = 26/108 (24%), Positives = 37/108 (34%), Gaps = 6/108 (5%)
Frame = +2
Query: 203 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARE------CAQSPDEPSCYNCNKTGHIAR 364
C KC + G+F DCK C G + + C + C C+ +
Sbjct: 549 CDKC-QVGYFGDDCK--FCNCDPMGTEGGVCDQTTGQCLCKEGFAGDKCDRCDIAFYGYP 605
Query: 365 NCPEGGRDNSNQTCYNCNKGSGHISRNCPDGTKTCYVCGKPGHISRDC 508
NC D + T C+ SG N +TC C + DC
Sbjct: 606 NCKACACDGAGITSPECDATSGQCPCNGNFTGRTCDKCAAGFYNYPDC 653
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,245,481
Number of Sequences: 27780
Number of extensions: 221878
Number of successful extensions: 1297
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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