Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_C01
         (547 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.0  
S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    21   6.2  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   6.2  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   6.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   6.2  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   8.2  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 467 CSRRAHFTRVMGDF 508
           C+R AHF R  GD+
Sbjct: 11  CTRSAHFARPGGDY 24


>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
           protein.
          Length = 85

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 273 YIAITHVFTHTGLITIVT*WSDW 205
           +I I  +F   GLIT V   SDW
Sbjct: 56  HIIIVGLFYEFGLITHVKLSSDW 78


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -3

Query: 125 LSSQNIRMMFFSYKNSTTNLQNK*KKNYN 39
           +SS +    + +Y N   N  N    NYN
Sbjct: 82  ISSLSNNYKYSNYNNYNNNYNNNYNNNYN 110


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -3

Query: 125 LSSQNIRMMFFSYKNSTTNLQNK*KKNYN 39
           +SS +    + +Y N   N  N    NYN
Sbjct: 82  ISSLSNNYKYSNYNNYNNNYNNNYNNNYN 110


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 251 NTCVIAIYITISSCSAFESISMTCK 325
           N   I I  T   CS F   +++CK
Sbjct: 84  NRMYIEIKFTTRDCSLFPGNALSCK 108


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 419 ITYVTIHTYKGIES 378
           +T+VT+  YKG+ S
Sbjct: 79  MTFVTVPRYKGVPS 92


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,865
Number of Sequences: 438
Number of extensions: 3309
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)